rna9005, rna9005 (mRNA) Nannochloropsis gaditana

Overview
Namerna9005
Unique Namerna9005
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length585
Alignment locationKK037251.1:83366..84123 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101527g3.6832.mrna
Orig protein idgnl|cribi|Naga_101527g3.6832
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:83366..84123 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101527g3gene8731Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9005rna9005-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21700.1cds8975Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9005 ID=rna9005|Name=rna9005|organism=Nannochloropsis gaditana|type=mRNA|length=585bp
ATGAGAGGGAAATTGGAGAGAATGAATAAGGGGGATGGTGGAGGGGAAAG
GGAGAAGAAAATGGCCGCGTGCGGCATAGGAAAAGGAACGATCAGAAAAA
AGTTTCCCCGGAGTCTCCCCCATAAAAAATCGAGAAAAAATAGGGTCATG
AGCCAGGGCGCGAACGCAGGGAGCACAGTGAGACGACCAAGCCATGGTGC
GATAGCTTGGAGAGGCTGTGCAGACTCTGCATGTATTGGGGGTATTGAAA
CTGAAAGCCACCTTAAATTTAGGAGGGGCGGGGGCCAAGAAGGGGAGGAA
GGGTGGGGAGAGGAAGCGAACGTGCAAAGATTCCTTAGAGAGATCTTTGG
GTGCGCATGGTGTCCTCCCTGCCTTTCCCCCCCTGAGATGGCTTTGACAG
AAAAACTTGATTTGAATACGAAGCAGGACCCGAGGTCGAGAAGAAGGAAG
GGAGGAGGACCAAGTGGGCTCCTTGAAAACAAACATGACGCAAGACGAAA
AAGAAAGAAAAAAAAAAACATAACACAGACAAGACATTTATACGGCCACG
GTGGCCTCCTTTCCCATCGCGCACGATGCGCCTGA
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protein sequence of rna9005

>rna9005-protein ID=rna9005-protein|Name=rna9005|organism=Nannochloropsis gaditana|type=polypeptide|length=198bp
MQAEKEAEKERARRKKAAGQYGKGGKKDIDPDKVKHRDVATDGASSLPPP
APEAPAPSPPAGVANLLTNLYSAEEPSVVIRRVKEALEVMGGKLSVKTAY
HLRAILPVDGEGAVETDVRIYSEGGIQLISVTRQMGDPLGFQKVFRAFRA
QTVDLHGEEGEDANNTAEESLGSPFGKGGPTPLEEGEEMGLANDDGML
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mRNA from alignment at KK037251.1:83366..84123-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9005 ID=rna9005|Name=rna9005|organism=Nannochloropsis gaditana|type=mRNA|length=758bp|location=Sequence derived from alignment at KK037251.1:83366..84123- (Nannochloropsis gaditana)
ATGCAGGCGGAGAAGGAGGCCGAAAAAGAGCGAGCCCGGCGCAAGAAAGC
CGCCGGACAGTACGGCAAGGGGGGAAAGAAGGTAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAAGGCCCACACAACGAGGTCTCACAAACTCTGGAT
CCACCACTTGCGAGAATCTCACTTCGTCCCCTCCCTCCCTCCCTCCCTCA
CTCTCTCCCTTTCTCCCTCCTGCCTTCCTCTCCTCCCTTCAGGATATTGA
CCCCGATAAGGTCAAGCACCGCGATGTTGCCACCGACGGCGCATCCTCCC
TCCCTCCCCCGGCCCCTGAGGCCCCTGCTCCTTCCCCTCCCGCCGGCGTC
GCGAATCTTCTCACGAATCTTTATTCGGCCGAGGAACCCTCCGTGGTCAT
TCGCCGGGTCAAGGAGGCCTTGGAAGTGATGGGGGGGAAACTCAGCGTGA
AGACAGCTTACCATCTCCGCGCGATCTTACCCGTCGACGGAGAGGGTGCG
GTGGAAACGGACGTGAGAATTTATTCCGAGGGAGGGATCCAATTGATCAG
CGTGACGCGGCAGATGGGCGATCCGTTGGGTTTCCAAAAAGTCTTCCGGG
CGTTCCGGGCGCAAACAGTGGATTTGCATGGGGAAGAAGGAGAGGATGCG
AATAACACGGCGGAGGAAAGCCTGGGGTCTCCCTTTGGGAAAGGGGGACC
GACGCCGTTGGAGGAGGGGGAGGAAATGGGCTTGGCAAATGACGATGGCA
TGCTCTAG
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Coding sequence (CDS) from alignment at KK037251.1:83366..84123-

>rna9005 ID=rna9005|Name=rna9005|organism=Nannochloropsis gaditana|type=CDS|length=1194bp|location=Sequence derived from alignment at KK037251.1:83366..84123- (Nannochloropsis gaditana)
GATATTGACCCCGATAAGGTCAAGCACCGCGATGTTGCCACCGACGGCGC
ATCCTCCCTCCCTCCCCCGGCCCCTGAGGCCCCTGCTCCTTCCCCTCCCG
CCGGCGTCGCGAATCTTCTCACGAATCTTTATTCGGCCGAGGAACCCTCC
GTGGTCATTCGCCGGGTCAAGGAGGCCTTGGAAGTGATGGGGGGGAAACT
CAGCGTGAAGACAGCTTACCATCTCCGCGCGATCTTACCCGTCGACGGAG
AGGGTGCGGTGGAAACGGACGTGAGAATTTATTCCGAGGGAGGGATCCAA
TTGATCAGCGTGACGCGGCAGATGGGCGATCCGTTGGGTTTCCAAAAAGT
CTTCCGGGCGTTCCGGGCGCAAACAGTGGATTTGCATGGGGAAGAAGGAG
AGGATGCGAATAACACGGCGGAGGAAAGCCTGGGGTCTCCCTTTGGGAAA
GGGGGACCGACGCCGTTGGAGGAGGGGGAGGAAATGGGCTTGGCAAATGA
CGATGGCATGCTCTAGATGCAGGCGGAGAAGGAGGCCGAAAAAGAGCGAG
CCCGGCGCAAGAAAGCCGCCGGACAGTACGGCAAGGGGGGAAAGAAGGAT
ATTGACCCCGATAAGGTCAAGCACCGCGATGTTGCCACCGACGGCGCATC
CTCCCTCCCTCCCCCGGCCCCTGAGGCCCCTGCTCCTTCCCCTCCCGCCG
GCGTCGCGAATCTTCTCACGAATCTTTATTCGGCCGAGGAACCCTCCGTG
GTCATTCGCCGGGTCAAGGAGGCCTTGGAAGTGATGGGGGGGAAACTCAG
CGTGAAGACAGCTTACCATCTCCGCGCGATCTTACCCGTCGACGGAGAGG
GTGCGGTGGAAACGGACGTGAGAATTTATTCCGAGGGAGGGATCCAATTG
ATCAGCGTGACGCGGCAGATGGGCGATCCGTTGGGTTTCCAAAAAGTCTT
CCGGGCGTTCCGGGCGCAAACAGTGGATTTGCATGGGGAAGAAGGAGAGG
ATGCGAATAACACGGCGGAGGAAAGCCTGGGGTCTCCCTTTGGGAAAGGG
GGACCGACGCCGTTGGAGGAGGGGGAGGAAATGGGCTTGGCAAATGACGA
TGGCATGCTCTAGATGCAGGCGGAGAAGGAGGCCGAAAAAGAGCGAGCCC
GGCGCAAGAAAGCCGCCGGACAGTACGGCAAGGGGGGAAAGAAG
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Synonyms
Publications