rna9004, rna9004 (mRNA) Nannochloropsis gaditana

Overview
Namerna9004
Unique Namerna9004
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length240
Alignment locationKK037251.1:82510..83302 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101527g2.6830.mrna
Orig protein idgnl|cribi|Naga_101527g2.6830
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:82510..83302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101527g2gene8730Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9004rna9004-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21698.1cds8974Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9004 ID=rna9004|Name=rna9004|organism=Nannochloropsis gaditana|type=mRNA|length=240bp
ATGACACCGTCATCCCCCTCGAGCTCCAAAGCCGCCCGGGGTCGGACCAA
AGGGGCGAAGGGCCCCAGGGCAGAATTTAAATTCAAAATGAGAGGGAGTG
CTTCGTATTTGAATGCGTGCATTTTTCAGGATTTGGAAATCTGTCGACGA
AGATGCTGCGGGGCTGCCAGGATAGGCACGCCTGGAGCCTATGGAGCCCG
AGAGCGAATGTTGCACGTTCGAAATCTTACAAATAGTTGA
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protein sequence of rna9004

>rna9004-protein ID=rna9004-protein|Name=rna9004|organism=Nannochloropsis gaditana|type=polypeptide|length=194bp
MRGKLERMNKGDGGGEREKKMAACGIGKGTIRKKFPRSLPHKKSRKNRVM
SQGANAGSTVRRPSHGAIAWRGCADSACIGGIETESHLKFRRGGGQEGEE
GWGEEANVQRFLREIFGCAWCPPCLSPPEMALTEKLDLNTKQDPRSRRRK
GGGPSGLLENKHDARRKRKKKKNITQTRHLYGHGGLLSHRARCA
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mRNA from alignment at KK037251.1:82510..83302-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9004 ID=rna9004|Name=rna9004|organism=Nannochloropsis gaditana|type=mRNA|length=793bp|location=Sequence derived from alignment at KK037251.1:82510..83302- (Nannochloropsis gaditana)
ATGAGAGGGAAATTGGAGAGAATGTGAGATATTGCTAATCTTATGGTGAG
CTAGGAGGGTGAGGTTTGAAAAGTTGAGGGAAAGGGGCTTGAAAAAGGCG
GCTTAAGGCCTCATAGAAAAGGAATAAGGGGGATGGTGGAGGGGAAAGGG
AGAAGAAAATGGCCGCGTGCGGCATAGGAAAAGGAACGATCAGAAAAAAG
TTTCCCCGGAGTCTCCCCCATAAAAAATCGAGAAAAAATAGGGTCATGAG
CCAGGGCGCGAACGTTAGCTATAAACAATTGCCACGATGAATGGACAGTT
TGCATACGATGAACGGACGCAGGAAGGAAGGCAGGGAGCACAGTGAGACG
ACCAAGCCATGGTGCGATAGCTTGGAGAGGCTGTGCAGACTCTGCATGTA
TTGGGGGTATTGAAACTGAAAGCCACCTTAAATTTAGGAGGGGCGGGGGC
CAAGAAGGGGAGGAAGGGTGGGGAGAGGAAGCGAACGTGCAAAGATTCCT
TAGAGAGATCTTTGGGTGCGCATGGTGTCCTCCCTGCCTTTCCCCCCCTG
AGATGGCTTTGACAGAAAAACTTGATTTGAATACGAAGCAGGACCCGAGG
TCGAGAAGAAGGAAGGGAGGAGGACCAAGTGGGCTCCTTGAAAACAAACA
TGACGCAAGACGAAAAAGAAAGAAAAAAAAAAACATAACACAGACAAGAC
ATTTATGTGATTTATGTGAGCGCGCCAGAAGCAGCCGTTGTGATGTCAGA
CGGCCACGGTGGCCTCCTTTCCCATCGCGCACGATGCGCCTGA
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Coding sequence (CDS) from alignment at KK037251.1:82510..83302-

>rna9004 ID=rna9004|Name=rna9004|organism=Nannochloropsis gaditana|type=CDS|length=2340bp|location=Sequence derived from alignment at KK037251.1:82510..83302- (Nannochloropsis gaditana)
ACGGCCACGGTGGCCTCCTTTCCCATCGCGCACGATGCGCCTGAGCAGGG
AGCACAGTGAGACGACCAAGCCATGGTGCGATAGCTTGGAGAGGCTGTGC
AGACTCTGCATGTATTGGGGGTATTGAAACTGAAAGCCACCTTAAATTTA
GGAGGGGCGGGGGCCAAGAAGGGGAGGAAGGGTGGGGAGAGGAAGCGAAC
GTGCAAAGATTCCTTAGAGAGATCTTTGGGTGCGCATGGTGTCCTCCCTG
CCTTTCCCCCCCTGAGATGGCTTTGACAGAAAAACTTGATTTGAATACGA
AGCAGGACCCGAGGTCGAGAAGAAGGAAGGGAGGAGGACCAAGTGGGCTC
CTTGAAAACAAACATGACGCAAGACGAAAAAGAAAGAAAAAAAAAAACAT
AACACAGACAAGACATTTATGAATAAGGGGGATGGTGGAGGGGAAAGGGA
GAAGAAAATGGCCGCGTGCGGCATAGGAAAAGGAACGATCAGAAAAAAGT
TTCCCCGGAGTCTCCCCCATAAAAAATCGAGAAAAAATAGGGTCATGAGC
CAGGGCGCGAACATGAGAGGGAAATTGGAGAGAATACGGCCACGGTGGCC
TCCTTTCCCATCGCGCACGATGCGCCTGAGCAGGGAGCACAGTGAGACGA
CCAAGCCATGGTGCGATAGCTTGGAGAGGCTGTGCAGACTCTGCATGTAT
TGGGGGTATTGAAACTGAAAGCCACCTTAAATTTAGGAGGGGCGGGGGCC
AAGAAGGGGAGGAAGGGTGGGGAGAGGAAGCGAACGTGCAAAGATTCCTT
AGAGAGATCTTTGGGTGCGCATGGTGTCCTCCCTGCCTTTCCCCCCCTGA
GATGGCTTTGACAGAAAAACTTGATTTGAATACGAAGCAGGACCCGAGGT
CGAGAAGAAGGAAGGGAGGAGGACCAAGTGGGCTCCTTGAAAACAAACAT
GACGCAAGACGAAAAAGAAAGAAAAAAAAAAACATAACACAGACAAGACA
TTTATGAATAAGGGGGATGGTGGAGGGGAAAGGGAGAAGAAAATGGCCGC
GTGCGGCATAGGAAAAGGAACGATCAGAAAAAAGTTTCCCCGGAGTCTCC
CCCATAAAAAATCGAGAAAAAATAGGGTCATGAGCCAGGGCGCGAACATG
AGAGGGAAATTGGAGAGAATACGGCCACGGTGGCCTCCTTTCCCATCGCG
CACGATGCGCCTGAGCAGGGAGCACAGTGAGACGACCAAGCCATGGTGCG
ATAGCTTGGAGAGGCTGTGCAGACTCTGCATGTATTGGGGGTATTGAAAC
TGAAAGCCACCTTAAATTTAGGAGGGGCGGGGGCCAAGAAGGGGAGGAAG
GGTGGGGAGAGGAAGCGAACGTGCAAAGATTCCTTAGAGAGATCTTTGGG
TGCGCATGGTGTCCTCCCTGCCTTTCCCCCCCTGAGATGGCTTTGACAGA
AAAACTTGATTTGAATACGAAGCAGGACCCGAGGTCGAGAAGAAGGAAGG
GAGGAGGACCAAGTGGGCTCCTTGAAAACAAACATGACGCAAGACGAAAA
AGAAAGAAAAAAAAAAACATAACACAGACAAGACATTTATGAATAAGGGG
GATGGTGGAGGGGAAAGGGAGAAGAAAATGGCCGCGTGCGGCATAGGAAA
AGGAACGATCAGAAAAAAGTTTCCCCGGAGTCTCCCCCATAAAAAATCGA
GAAAAAATAGGGTCATGAGCCAGGGCGCGAACATGAGAGGGAAATTGGAG
AGAATACGGCCACGGTGGCCTCCTTTCCCATCGCGCACGATGCGCCTGAG
CAGGGAGCACAGTGAGACGACCAAGCCATGGTGCGATAGCTTGGAGAGGC
TGTGCAGACTCTGCATGTATTGGGGGTATTGAAACTGAAAGCCACCTTAA
ATTTAGGAGGGGCGGGGGCCAAGAAGGGGAGGAAGGGTGGGGAGAGGAAG
CGAACGTGCAAAGATTCCTTAGAGAGATCTTTGGGTGCGCATGGTGTCCT
CCCTGCCTTTCCCCCCCTGAGATGGCTTTGACAGAAAAACTTGATTTGAA
TACGAAGCAGGACCCGAGGTCGAGAAGAAGGAAGGGAGGAGGACCAAGTG
GGCTCCTTGAAAACAAACATGACGCAAGACGAAAAAGAAAGAAAAAAAAA
AACATAACACAGACAAGACATTTATGAATAAGGGGGATGGTGGAGGGGAA
AGGGAGAAGAAAATGGCCGCGTGCGGCATAGGAAAAGGAACGATCAGAAA
AAAGTTTCCCCGGAGTCTCCCCCATAAAAAATCGAGAAAAAATAGGGTCA
TGAGCCAGGGCGCGAACATGAGAGGGAAATTGGAGAGAAT
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Synonyms
Publications