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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100762g1.10489.mrna |
| Orig protein id | gnl|cribi|Naga_100762g1.10489 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:50347..52445 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8997 ID=rna8997|Name=rna8997|organism=Nannochloropsis gaditana|type=mRNA|length=525bp
ATGCCCCGGCTTCGGAACGGGAAACGTCGGATGTACCACGTGAGCCTACC
CACATCGCACAGCAAGCGGGTCAAACGCAGCGGAAGCAATGGCAGCGAGG
GAGAAGAGGGAGGGGTCTCGAGTGGGGGTTCGAGCGGAGGAGGTGCGGAG
GGAGGAGGCAACGTGGGAGGAGGAGGAGGAGGACGCGACGGGGCGGTTTC
TGGGCGGGGCCTGTCCACTTCCCTGGTACCTCCGTGTCCGGGAAAAGATA
CCCGGCAGAAGAAGGCGTCCGGAGGGGTCAAGTGCCGACGCGCTGGCGCG
AAGCGTGCGGTTAGGAGGATGACGGGAACCGCGTTGAGGGGACGAGTGAT
ACCGGCAACTTCGCACAGCGACCCTGCTGCTACACTGTTGGAGAGTTTGA
ATCTGAACGTGCTCTCGGAAGTGATCAGCTTTCTAGGGGCGCAAGAGACG
GAGGCCCTGGCCGCGACGTCCCCGAGCTTTCGCGCCAAATCTTCCTACCG
GGCCTACATCCAGAACTCCTGGTAA back to topprotein sequence of rna8997 >rna8997-protein ID=rna8997-protein|Name=rna8997|organism=Nannochloropsis gaditana|type=polypeptide|length=283bp
MFPVPRRRGVSAFPVLSFSLLLVVFQSGHVAQAFFTQPLFSSSKNSFWTG
ARKESLHASSSDVTTTSSSSSSSSVNVAASSPTPPSTPALNPYVSASRTS
GSGLSHPLDPIGRIDASPQALLDWVKAGRGELHEGVAFTHAPSSDAQVDG
EGGTEAGTEELAGWTLQTQVPVQAGTVLVSIPNVLTLSPTRRKFKLPTGA
AAMQVGGNEGETEGRREVGEARGVFSGRRLRCLSWCGAHAPSLPPSLPPS
LPSSLPLPPSHPLASLLPSFFLPSFPLISSRTY back to topmRNA from alignment at KK037251.1:50347..52445+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8997 ID=rna8997|Name=rna8997|organism=Nannochloropsis gaditana|type=mRNA|length=2099bp|location=Sequence derived from alignment at KK037251.1:50347..52445+ (Nannochloropsis gaditana)
CTCTCATCCCGCTTGGGCAACATGATTAAATTACCCCTTCTAACCTAAAA
TGTGCCGCCTTTAATGACACTGCACAGGCAATAGTCTATCTGAAGCCAAA
TTCACTTGCATACCGAGTTTTTAGTAAAGGGACAGCACCAGCATCTGCAT
GTTTCCAGTACCCCGTAGAAGAGGCGTGAGTGCCTTCCCCGTCCtatcct
tctccctccttcttgtcgtCTTCCAGAGTGGCCATGTAGCCCAGGCCTTC
TTTACGCAGCCATTATTCTCTTCGTCGAAGAACTCTTTCTGGACCGGGGC
CAGGAAAGAGGTGAGTACGATCCCGGCCCTTCTGACAGTGACATACATTG
GCacgcccccgacctcctccctcttccccctcccatgcccctTTCCAGTC
CCTGCACGCCAGCTCCTCGGACGTAaccaccaccagctcctcttcctcct
cctcctccgtcaatgtcgccgcctccagccccacgcccccctccaCACCC
GCGCTTAACCCCTACGTGAGCGCAAGCCGGACGTCCGGTAGGATTTGCAT
CACagcgccttcccccttgccgcCTTGACCCCCACCTcacccgcctccct
ccctctctcactcgTACCCTAGGCTCTGGACTCTCGCACCCGCTGGACCC
CATCGGACGCATCGACGCTAGCCCCCAGGCTCTCTTGGACTGGGTGAAAG
CGGGCCGGTGAGGCCGGGAGCGGGcttgagggggggagggaagctaggac
gacgggagggagggatggaaatgACCTTGTTCCACTCCGTGGCCCCCTGC
TTATTTtggcttttctttttttcccattttctcttttctccctccctccc
tccgccctccctccctccttcccctccctgtgaCGCGGCAGTGGGGAGCT
CCACGAAGGTGTGGCTTTCACCCATGCCCCGTCCTCGGACGCACAGGTgg
acggcgagggcgggacggaggcagggacggaggagctGGCCGGGTGGACG
CTGCAGACTCAGGTTCCAGTGCAGGCGGGCACCGTGCTGGTCTCCATCCC
CAACGTGTTGACACTCTCACCTACCCGGAGAAAGTTCAAGCTGCCCACGG
GAGCGGCCGCGAtgcaggtgggagggaacgagggagagacggaggggagg
agggaggtaggggaggcgCGTGGGGTCTTTTCTGGACGGCGCCTGAGATG
CCTGTCTTGGTGTGGTGctcatgctccctccctccctccgtccctccctc
cctcccttccttcctctcttcccctccctccttcccaccctctcgcttcc
ctccttccatccttcttccttccttccttccccctcattAGCTCAAGGAC
ATACTGAACCGAAAGGCGCCAGCCGACGCCGCCAGCGAAGCCATCGCGGC
CCTGGTCAGTGACGAGGGCGTCGCCAAGCTTCTAGAAGATTCCATCATCG
ACGAGCGCATCCAGCgggtacctccctccctctctccctcaatTTAAttc
ccaccgcctcttctcccccttctctcacGGCGTGTCATTGCCTGTGCAGC
CTTATGCCCCATGAaacctctttccctcccccccaacctcccttccttcc
ttccttccttcctccctccctccctccctcactcccgcTCCGCAGGTGAT
GGACTCCTTTCCAGAGACGTACTGGCGCATCAAGCTCGCGGTCCTGTTGG
TGGCTGAGAGGATGAAAGGACCACAATCCTTCTGgtatccctccttccct
tcctccctccctccctccctccctcactccctccctccctccctctctcc
ctccctctacccaTCCCTCGCCCGTTCTTCTCGCGGCCTTCTTGCAAACC
ACTCGTGGTAGACATGGTCCAatcctttccgcctcccccttcccccctcc
ctctgtcccttcctccttcccttcctccttccctccctccgtccctcctt
cccccccgccctccaggtGGCCCTACTTGAGAAATTTGCCCGAGAAATAT
GCGCACATGCCGATCTTCTACAACAATAGCGAGTTCGGTTCCATTCAAAT
CCCTTCTCTTATGCGGACAGTGCAGGtgcgtctttcctccctccttccc back to topCoding sequence (CDS) from alignment at KK037251.1:50347..52445+ >rna8997 ID=rna8997|Name=rna8997|organism=Nannochloropsis gaditana|type=CDS|length=3408bp|location=Sequence derived from alignment at KK037251.1:50347..52445+ (Nannochloropsis gaditana)
ATGTTTCCAGTACCCCGTAGAAGAGGCGTGAGTGCCTTCCCCGTCCtatc
cttctccctccttcttgtcgtCTTCCAGAGTGGCCATGTAGCCCAGGCCT
TCTTTACGCAGCCATTATTCTCTTCGTCGAAGAACTCTTTCTGGACCGGG
GCCAGGAAAGAGTCCCTGCACGCCAGCTCCTCGGACGTAaccaccaccag
ctcctcttcctcctcctcctccgtcaatgtcgccgcctccagccccacgc
ccccctccaCACCCGCGCTTAACCCCTACGTGAGCGCAAGCCGGACGTCC
GGCTCTGGACTCTCGCACCCGCTGGACCCCATCGGACGCATCGACGCTAG
CCCCCAGGCTCTCTTGGACTGGGTGAAAGCGGGCCGTGGGGAGCTCCACG
AAGGTGTGGCTTTCACCCATGCCCCGTCCTCGGACGCACAGGTggacggc
gagggcgggacggaggcagggacggaggagctGGCCGGGTGGACGCTGCA
GACTCAGGTTCCAGTGCAGGCGGGCACCGTGCTGGTCTCCATCCCCAACG
TGTTGACACTCTCACCTACCCGGAGAAAGTTCAAGCTGCCCACGGGAGCG
GCCGCGAtgcaggtgggagggaacgagggagagacggaggggaggaggga
ggtaggggaggcgCGTGGGGTCTTTTCTGGACGGCGCCTGAGATGCCTGT
CTTGGTGTGGTGctcatgctccctccctccctccgtccctccctccctcc
cttccttcctctcttcccctccctccttcccaccctctcgcttccctcct
tccatccttcttccttccttccttccccctcattAGCTCAAGGACATACT
GAATGTTTCCAGTACCCCGTAGAAGAGGCGTGAGTGCCTTCCCCGTCCta
tccttctccctccttcttgtcgtCTTCCAGAGTGGCCATGTAGCCCAGGC
CTTCTTTACGCAGCCATTATTCTCTTCGTCGAAGAACTCTTTCTGGACCG
GGGCCAGGAAAGAGTCCCTGCACGCCAGCTCCTCGGACGTAaccaccacc
agctcctcttcctcctcctcctccgtcaatgtcgccgcctccagccccac
gcccccctccaCACCCGCGCTTAACCCCTACGTGAGCGCAAGCCGGACGT
CCGGCTCTGGACTCTCGCACCCGCTGGACCCCATCGGACGCATCGACGCT
AGCCCCCAGGCTCTCTTGGACTGGGTGAAAGCGGGCCGTGGGGAGCTCCA
CGAAGGTGTGGCTTTCACCCATGCCCCGTCCTCGGACGCACAGGTggacg
gcgagggcgggacggaggcagggacggaggagctGGCCGGGTGGACGCTG
CAGACTCAGGTTCCAGTGCAGGCGGGCACCGTGCTGGTCTCCATCCCCAA
CGTGTTGACACTCTCACCTACCCGGAGAAAGTTCAAGCTGCCCACGGGAG
CGGCCGCGAtgcaggtgggagggaacgagggagagacggaggggaggagg
gaggtaggggaggcgCGTGGGGTCTTTTCTGGACGGCGCCTGAGATGCCT
GTCTTGGTGTGGTGctcatgctccctccctccctccgtccctccctccct
cccttccttcctctcttcccctccctccttcccaccctctcgcttccctc
cttccatccttcttccttccttccttccccctcattAGCTCAAGGACATA
CTGAATGTTTCCAGTACCCCGTAGAAGAGGCGTGAGTGCCTTCCCCGTCC
tatccttctccctccttcttgtcgtCTTCCAGAGTGGCCATGTAGCCCAG
GCCTTCTTTACGCAGCCATTATTCTCTTCGTCGAAGAACTCTTTCTGGAC
CGGGGCCAGGAAAGAGTCCCTGCACGCCAGCTCCTCGGACGTAaccacca
ccagctcctcttcctcctcctcctccgtcaatgtcgccgcctccagcccc
acgcccccctccaCACCCGCGCTTAACCCCTACGTGAGCGCAAGCCGGAC
GTCCGGCTCTGGACTCTCGCACCCGCTGGACCCCATCGGACGCATCGACG
CTAGCCCCCAGGCTCTCTTGGACTGGGTGAAAGCGGGCCGTGGGGAGCTC
CACGAAGGTGTGGCTTTCACCCATGCCCCGTCCTCGGACGCACAGGTgga
cggcgagggcgggacggaggcagggacggaggagctGGCCGGGTGGACGC
TGCAGACTCAGGTTCCAGTGCAGGCGGGCACCGTGCTGGTCTCCATCCCC
AACGTGTTGACACTCTCACCTACCCGGAGAAAGTTCAAGCTGCCCACGGG
AGCGGCCGCGAtgcaggtgggagggaacgagggagagacggaggggagga
gggaggtaggggaggcgCGTGGGGTCTTTTCTGGACGGCGCCTGAGATGC
CTGTCTTGGTGTGGTGctcatgctccctccctccctccgtccctccctcc
ctcccttccttcctctcttcccctccctccttcccaccctctcgcttccc
tccttccatccttcttccttccttccttccccctcattAGCTCAAGGACA
TACTGAATGTTTCCAGTACCCCGTAGAAGAGGCGTGAGTGCCTTCCCCGT
CCtatccttctccctccttcttgtcgtCTTCCAGAGTGGCCATGTAGCCC
AGGCCTTCTTTACGCAGCCATTATTCTCTTCGTCGAAGAACTCTTTCTGG
ACCGGGGCCAGGAAAGAGTCCCTGCACGCCAGCTCCTCGGACGTAaccac
caccagctcctcttcctcctcctcctccgtcaatgtcgccgcctccagcc
ccacgcccccctccaCACCCGCGCTTAACCCCTACGTGAGCGCAAGCCGG
ACGTCCGGCTCTGGACTCTCGCACCCGCTGGACCCCATCGGACGCATCGA
CGCTAGCCCCCAGGCTCTCTTGGACTGGGTGAAAGCGGGCCGTGGGGAGC
TCCACGAAGGTGTGGCTTTCACCCATGCCCCGTCCTCGGACGCACAGGTg
gacggcgagggcgggacggaggcagggacggaggagctGGCCGGGTGGAC
GCTGCAGACTCAGGTTCCAGTGCAGGCGGGCACCGTGCTGGTCTCCATCC
CCAACGTGTTGACACTCTCACCTACCCGGAGAAAGTTCAAGCTGCCCACG
GGAGCGGCCGCGAtgcaggtgggagggaacgagggagagacggaggggag
gagggaggtaggggaggcgCGTGGGGTCTTTTCTGGACGGCGCCTGAGAT
GCCTGTCTTGGTGTGGTGctcatgctccctccctccctccgtccctccct
ccctcccttccttcctctcttcccctccctccttcccaccctctcgcttc
cctccttccatccttcttccttccttccttccccctcattAGCTCAAGGA
CATACTGA back to top
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