rna8996, rna8996 (mRNA) Nannochloropsis gaditana

Overview
Namerna8996
Unique Namerna8996
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length835
Alignment locationKK037251.1:46489..47446 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100762g2.10490.mrna
Orig protein idgnl|cribi|Naga_100762g2.10490
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:46489..47446 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100762g2gene8722Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8996rna8996-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21707.1cds8966Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8996 ID=rna8996|Name=rna8996|organism=Nannochloropsis gaditana|type=mRNA|length=835bp
TCTTCCATCCGCCTCTCCCTCCCTCCCTTCTTCCCCTCCTCCTCCCCTCT
TGCTTACCCCCCAGGCGCCTTCCCTTCCTTACGAACTTTCCACCTGAACG
ACCTCTCCTCTTCGCCCTCCCTCTTCCCTCACTCCCGCTCCGGGCGCCTC
GAGCTTCTGCGGGTGCTGCTGGAGGAAGGGATCAGGAAGGGCGGAGTCCT
ACCTTGTTTGGAAGACCTCTCTTTGAGGAATACGGGCGTCACCTCCGCAG
ACTTCGAGGACCTGCTGTATGCACGCTGCCTCCCTCCCTCGTCCATCTCT
CACTTGGGAACGAGAGCGAAAGCTTGATTTACAACTTCAATTGTGTGGGG
TGGCCGGCCATGCAGGCGCTCAGACCCTGAATCTGCACGGAAACCGGCTC
TCCCCCTTTGGGGCCAGTCAACTCTTCACCTCACTCGTCAAGCATAGGGT
CATGCCCGCACTTCGGCGTCTGGATGTCCGCAACACGCACGTCGGGGCCG
ATGGCCTGGGCTCTGTCCTCAAAATTCTCAGCCTCCGAGCTCCTTCCCCC
TCCTCTTCTTCCTCCTTCCCGGCCACCACCCCTAACTCTCCTCCCTTGGG
CACCCTTCGGCACCTCTACGTCTCTCTGATGCATGGAAAGGACGAAGAAA
GACAGCTGGAGACCGTACAGGCGCTCCTCTTGCAGGCTTCGCAAAGCTTG
CCGCGCCTGCGCATGCTGGCTATATTGGACGAAGGCGAGATTTTGGACGC
CGACACCGAGAACCGCCTTAAGGTGACCAATTCCGCCATTTTGGTGCGCC
ATCACACCCGAGCTTTGCCCACACCTGCAGTTTGA
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protein sequence of rna8996

>rna8996-protein ID=rna8996-protein|Name=rna8996|organism=Nannochloropsis gaditana|type=polypeptide|length=174bp
MPRLRNGKRRMYHVSLPTSHSKRVKRSGSNGSEGEEGGVSSGGSSGGGAE
GGGNVGGGGGGRDGAVSGRGLSTSLVPPCPGKDTRQKKASGGVKCRRAGA
KRAVRRMTGTALRGRVIPATSHSDPAATLLESLNLNVLSEVISFLGAQET
EALAATSPSFRAKSSYRAYIQNSW
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mRNA from alignment at KK037251.1:46489..47446-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8996 ID=rna8996|Name=rna8996|organism=Nannochloropsis gaditana|type=mRNA|length=958bp|location=Sequence derived from alignment at KK037251.1:46489..47446- (Nannochloropsis gaditana)
ATGCCCCGGCTTCGGAACGGGAAACGTCGGATGTACCACGTGAGCCTACC
CACATCGCACAGCAAGCGGGTCAAACGCAGCGGAAGCAATGGCAGCGAGG
GAGAAGAGGGAGGGGTCTCGAGTGGGGGTTCGAGCGGAGGAGGTGCGGAG
GGAGGAGGCAACGTGGGAGGAGGAGGAGGAGGACGCGACGGGGCGGTTTC
TGGGCGGGGCCTGTCCACTTCCCTGGTACCTCCGTGTCCGGGAAAAGATA
CCCGGCAGAAGAAGGCGTCCGGAGGGGTCAAGTGCCGACGCGCTGGCGCG
AAGCGTGCGGTTAGGAGGATGACGGGAACCGCGTTGAGGGGACGAGTGAT
ACCGGCAACTTCGCACAGGTATTCCCTCCCTCCCCCTCTCCTTCCCTCTC
TCCCTCCCTCCCCACCTTCTACTCCTCCGTTTTATCCCCTCCTGAATACG
CTCTTCCCTTCTACGACACAGCGACCCTGCTGCTACACTGTTGGAGAGTT
TGAATCTGAACGTGCTCTCGGAAGTGATCAGCTTTCTAGGGGCGCAAGAG
GTGCGAGAGCGGGGGGAGGGAGGGCGGAAGGGAGGGCGGGAGGGAGGGTG
GACACGTCCTGGAGGGTGACCAAAGGGGAGGGTAAGCGAGGAATAGAAGG
TTTATGCGAGGTGCCTCGGAGGGATTCACGCGCGCCCTGGACCCCTCCCT
CCACCCAGACGGAGGCCCTGGCCGCGACGTCCCCGAGCTTTCGCGCCAAA
TCTTCCTACCGGGCCTACATCCAGAACTGTCGAATCTTCTCTCCTACCGC
CCTTTTCCCCACTCCCTCCCCTCCCTCCTCCCTGGCCGGGCACGTGGAGG
ATTCGAAATGCTTGGGCATCCCGGTCCGAGACAAGGGAGGGCGGGGGGGA
GGAAGGGAGGGAGGAAGGGGCGTCGGGCGCCCAGGAACGAACGTTTGTAG
CCTGGTAA
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Coding sequence (CDS) from alignment at KK037251.1:46489..47446-

>rna8996 ID=rna8996|Name=rna8996|organism=Nannochloropsis gaditana|type=CDS|length=2100bp|location=Sequence derived from alignment at KK037251.1:46489..47446- (Nannochloropsis gaditana)
CCTGGTAAACGGAGGCCCTGGCCGCGACGTCCCCGAGCTTTCGCGCCAAA
TCTTCCTACCGGGCCTACATCCAGAACTCGACCCTGCTGCTACACTGTTG
GAGAGTTTGAATCTGAACGTGCTCTCGGAAGTGATCAGCTTTCTAGGGGC
GCAAGAGATGCCCCGGCTTCGGAACGGGAAACGTCGGATGTACCACGTGA
GCCTACCCACATCGCACAGCAAGCGGGTCAAACGCAGCGGAAGCAATGGC
AGCGAGGGAGAAGAGGGAGGGGTCTCGAGTGGGGGTTCGAGCGGAGGAGG
TGCGGAGGGAGGAGGCAACGTGGGAGGAGGAGGAGGAGGACGCGACGGGG
CGGTTTCTGGGCGGGGCCTGTCCACTTCCCTGGTACCTCCGTGTCCGGGA
AAAGATACCCGGCAGAAGAAGGCGTCCGGAGGGGTCAAGTGCCGACGCGC
TGGCGCGAAGCGTGCGGTTAGGAGGATGACGGGAACCGCGTTGAGGGGAC
GAGTGATACCGGCAACTTCGCACAGCCTGGTAAACGGAGGCCCTGGCCGC
GACGTCCCCGAGCTTTCGCGCCAAATCTTCCTACCGGGCCTACATCCAGA
ACTCGACCCTGCTGCTACACTGTTGGAGAGTTTGAATCTGAACGTGCTCT
CGGAAGTGATCAGCTTTCTAGGGGCGCAAGAGATGCCCCGGCTTCGGAAC
GGGAAACGTCGGATGTACCACGTGAGCCTACCCACATCGCACAGCAAGCG
GGTCAAACGCAGCGGAAGCAATGGCAGCGAGGGAGAAGAGGGAGGGGTCT
CGAGTGGGGGTTCGAGCGGAGGAGGTGCGGAGGGAGGAGGCAACGTGGGA
GGAGGAGGAGGAGGACGCGACGGGGCGGTTTCTGGGCGGGGCCTGTCCAC
TTCCCTGGTACCTCCGTGTCCGGGAAAAGATACCCGGCAGAAGAAGGCGT
CCGGAGGGGTCAAGTGCCGACGCGCTGGCGCGAAGCGTGCGGTTAGGAGG
ATGACGGGAACCGCGTTGAGGGGACGAGTGATACCGGCAACTTCGCACAG
CCTGGTAAACGGAGGCCCTGGCCGCGACGTCCCCGAGCTTTCGCGCCAAA
TCTTCCTACCGGGCCTACATCCAGAACTCGACCCTGCTGCTACACTGTTG
GAGAGTTTGAATCTGAACGTGCTCTCGGAAGTGATCAGCTTTCTAGGGGC
GCAAGAGATGCCCCGGCTTCGGAACGGGAAACGTCGGATGTACCACGTGA
GCCTACCCACATCGCACAGCAAGCGGGTCAAACGCAGCGGAAGCAATGGC
AGCGAGGGAGAAGAGGGAGGGGTCTCGAGTGGGGGTTCGAGCGGAGGAGG
TGCGGAGGGAGGAGGCAACGTGGGAGGAGGAGGAGGAGGACGCGACGGGG
CGGTTTCTGGGCGGGGCCTGTCCACTTCCCTGGTACCTCCGTGTCCGGGA
AAAGATACCCGGCAGAAGAAGGCGTCCGGAGGGGTCAAGTGCCGACGCGC
TGGCGCGAAGCGTGCGGTTAGGAGGATGACGGGAACCGCGTTGAGGGGAC
GAGTGATACCGGCAACTTCGCACAGCCTGGTAAACGGAGGCCCTGGCCGC
GACGTCCCCGAGCTTTCGCGCCAAATCTTCCTACCGGGCCTACATCCAGA
ACTCGACCCTGCTGCTACACTGTTGGAGAGTTTGAATCTGAACGTGCTCT
CGGAAGTGATCAGCTTTCTAGGGGCGCAAGAGATGCCCCGGCTTCGGAAC
GGGAAACGTCGGATGTACCACGTGAGCCTACCCACATCGCACAGCAAGCG
GGTCAAACGCAGCGGAAGCAATGGCAGCGAGGGAGAAGAGGGAGGGGTCT
CGAGTGGGGGTTCGAGCGGAGGAGGTGCGGAGGGAGGAGGCAACGTGGGA
GGAGGAGGAGGAGGACGCGACGGGGCGGTTTCTGGGCGGGGCCTGTCCAC
TTCCCTGGTACCTCCGTGTCCGGGAAAAGATACCCGGCAGAAGAAGGCGT
CCGGAGGGGTCAAGTGCCGACGCGCTGGCGCGAAGCGTGCGGTTAGGAGG
ATGACGGGAACCGCGTTGAGGGGACGAGTGATACCGGCAACTTCGCACAG
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Synonyms
Publications