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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100841g1.9905.mrna |
| Orig protein id | gnl|cribi|Naga_100841g1.9905 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:3958..5165 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8985 ID=rna8985|Name=rna8985|organism=Nannochloropsis gaditana|type=mRNA|length=2979bp
ATGAAGGGGGGGGGCAGCACTAATGGCGAAGTGCAGAAAGAGGAAGATAG
GCTGCAGGCAATTGTTTTGGCAGATTCCTTCACTGGAAGCTTCCGGCCGT
GCTCGCTCGATAAACCGAAAGTCCTCTTGCCTCTCTTAAATGTACCCATG
CTCGACTACGTGATGGAATTTCTCGTAGCGGCCGGAGTGCAGGAAGTTTT
TATATTCTGTGTCAACAAAAAGGAGGATGTGCAAGACTACATATGCCGAT
CGAAGTGGCCCTCTGTAGTTGGTCTCCGCTGCATCTCTTCAGCCAAATGC
ATGGGCACGGGGGACGCGCTACGGGAGATGGACACCCTAGGCCTGGTCCG
CTCCAACCCCTTCGTCCTCATCAGTGGCGACGTGGTCGCGACCGTGGACT
TGGCGGGCGTGGTGGCCGCGCACAAGCGGCGTAGGGCTGAGAACAGCCTC
TCCATCTGCACCGTGGTGCTGTCTAAGGTGGGGTACGACGCGGCCGTGCA
CGCTCGGCGGGAGGACCTGGCCGTGGGACTGGACGCTGAGACCGCTCAGC
TTGTGCTGTACCAGGACGACGAGGGCGAGGAGAGCGGGGTGGACGTGGAG
CTGGACCTCTTCAAAGAGGAAGGACATCCGGAGATCATGCTCCGGAGCGA
CCTGATGGACTGCCATATCTACGTCTGCTCGCCCGAGGTCCTGGTCGCCT
TCTCGGACAACTGGGACTATCAGGACATGGGCCGCTTTCTCCGCCACGAG
GTGGAGAGCCGAGAGATGGGTAATAAGGTCTACTCACACGTGACGCTCCC
GCACGAGTACGCGGCGCGGGTGCACGACCCCCACGTCTACCACGCTGTCT
CCAAGGACCTCCTCCACCGGTGGTTGTACCCGAGCGTGCCTGAGACCAAC
CGCTTCCATGCCGGCAAGCCCACCTCCTATCGGTACCACAAGCGCTGGCT
TTATCGTGAGGAGGAAGACGCTGGTGGGGCGAGCGTGCATGTCTCTCGTT
TTGCCACGGTCAGTGAAAGCGTCATGCTCGGGCGAGGCACCAGCATTGGG
GCGGGCTCGGTGCTCTCTCAGAGCGTCTTAGGCCGGCGTGTCAAGGTAGG
GTCCGGCGTGCACATCTCGGACTCACATCTCTGGCAGGACGTGGTGGTGG
AGGACGGCGCAGTCGTGGAGAGCAGCATATTGAGCGACGGCGTGGTGGTG
AGGGCGGGCGCACGCGTGGGACGGGGCTCGCTGCTGTCCTACGGGGTAGT
GGTGGGCAAGCGAGTGGAGTTGCCGCCATTCTCGCGTCTCACAGCGACGC
CTGTGAGCTCCTGGGAGGAAGAAGGTGGCGTAGAGAGGGACGGTGTGATG
GGCACGGCTTTATCGGTCTTGGCCTCCCCCATCAAGCGGATAGAGAGTCG
AGACGGACCAGAAGGCCTGTCAACCGAGAGGGGAGGGGAGGCGGACAATG
TCACCGACACCGGTTGTGTCGGTGTTGATGGGATTGGGCATCCTTGGAAT
CCCTGCTTCGATGGCGAGAGAGTCTCAATGCTGGATGTCCGCGCGCAGAG
CATCGGGGCCATTGAGGCGGACGAGGATCGCCGGCGGCGGTGGGAAGTCC
TGGACGAAGAGGAAGAGGAGGAGGAAGGCATCTATATAGATGAAGACGGG
GGGAGACGAGGTCCGGAGTCTGACCTGACGGATTTCTCCTCGGCACTGGC
CAGGAGCCTGGCAGGAGTAGATACTGAGCGAGGGACTGCCGGCGCTGTGT
ATGGGATTCGGCTGGGAGGATCTGCCGGAGAAGCAGATACGAATTGTACG
TCTGATGACGACTTTGCAGAGGTGGTGCGGGACATGATTATATCCGGCTT
CGCCTCGCGACACGCGATCTCCAACCTATTGCTGGAGATCAAATCTTTTA
AATTTGCCCAGAACCGTTCCTATGCAGCCGTGATGCGTGCTGTGGTTCCC
GCCTTGCTAGACCTGGCCTTGGACCCTGACGCCGTGTGTCGCCACGCTGA
GAAAGACTCCTCCCTTTCACGCCGCACTTTGGGGGCAGGGGAGCAGAATC
ATGCTCGGGGGCGCGTGTCAGGAGTCGACACGGATCCCTCAGGAGCCCGG
GATTCAAATTTAGTCGCCGCTCAGCCCAGGTTGTCAGAGCAGGGCGCCAT
TTCAAATATTGCTACACAGCTTCAGCACTGGAAACCGCTTTTAGTCGCCT
TCAATCAAGAAGACGAAGTGGAAGAGGCTTTGTTGGAGGCTACAGAAGCT
TATGCTTTAGAGTCGAAAGGAATAGGAGATCAGGCTGGCGCATCACGCCT
TCTGTATGATATTTTTGGACTCGTATTGCTCACGTATGTGAACGAAGGTT
TGCTATCTCCAGCTATAGCCGTCGCATGGGCAGACGCCTATAATGAGGAC
GATTCTTTGGACGAGAAGAGTAAGTTGTTCAGAGAAGCACGGACGCAAAA
GTTTGTGAAATGGGTGCGGGAATATGAAGTGGATGACAGCACCAGCAGTG
ACGAAGGAACAAGCGATTCAGAGTGAGCTTGTACCAAATAGAAGAAATTA
AACTGGGCACTAGTTGTTGACGAGCCGGAACGGATTTCTGGTTATTTTTC
AGAAACGGCTGGCATTCGCAGAAACCGAATCGTGGTGAGGTATACCCAAT
ATGATGTGTGAGTGCCTGTGAGTCTAAGGGATAGTGTAGTACGTATGTGA
GTACAGTTTGATCTTGAGTATGTGTGAGTATAGGTGTAGTGTGTGTTTAT
ATGTGGTGTGGTTTCGGGTGTGTGAGTCATAATATTCCCACTCATATTTG
CTCTCTTTTCATGACTCATAACCCCAAATGGTGAAATCACTGCCGAACCG
AGGTAGAAAGTGTCGAGTTGCTTAGCTCAGCAGCCGAGTTGCTGCGGCTA
TTCTAATTTTGCGCCCTCACAGGCTATTGCGATCGGATTTTAAGTCCTTA
GATTCCCAGCATAAAGAACAACCACTGAG back to topprotein sequence of rna8985 >rna8985-protein ID=rna8985-protein|Name=rna8985|organism=Nannochloropsis gaditana|type=polypeptide|length=293bp
MPRLPSRRPPREKEDSTPPSTAPQLLYDPASGNLVAPSAAKSRTASSDRR
SDNRHRDRHGSPRPAPEVSSLAGATRRPSSHSGRQRSRQEDRQLLREEKR
EHPQQEHANEQEGRRAGRWPLQLRGVLEQAESELDSRAVGICLDRALEMI
ESRAQRAKTERDARKTGAAAEGARALVDTCVRLVRPAGEATSLGVDLVCV
VVPVLRRLGDSAHPGLSAALDARFAEVVKALLVWAREAAGEAVGACMAVE
EALQAWGVGSGDLSLWGRHLPLARSLLQDILEEVQDLGSEGSA back to topmRNA from alignment at KK037251.1:3958..5165+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8985 ID=rna8985|Name=rna8985|organism=Nannochloropsis gaditana|type=mRNA|length=1208bp|location=Sequence derived from alignment at KK037251.1:3958..5165+ (Nannochloropsis gaditana)
CCTGTATACTCCGAATAATTTCGTGGGTAATCCGTCTTCGTTATTCACAG
CCATTACTCTACGTGCAAGACATTGCGGCTCCCCACAAGGATGTTGCGCA
GACCTGCATCATTTCTGAAGGCTTGCCGGCttcaaaaagaaaagcattgT
AGTGCCTCTACCTCGCGGCCTACCACGCTAGAATTATCACATCCTGCGTC
CTCTTTTGTATCCAGTCATTCTCATTGAGGCTTCTTGAGATGGATTTGGC
GCTTTCAAAGTTACTATGTGGCTTCCGCCAGTTTTTGAGGCTGTTTCGCT
TGGAAAGAGACAGGTAGCCAGCATTGCTAATGCCGCGCTTGCCGTctcgt
cgccccccccgggagaaggaggactccacgcccccctccaCAGCCCCGCA
ACTGCTCTACGATCCAGCCTCTGGCAACCTTGTTGCACCCTCTGCGGCAA
AGTCGcggaccgcgtcctccgacCGCCGCAGTGACAACCGGCATCGGGAC
CGACATGGGTCACCCAGACCGGCCCCGGAGGTGTCCTCTCTGGCCGGCGC
GACGCGGCGCCCCTCGTCTCACTCTGGTCGACAGCGCTCACGACAGGAAG
ACAGGCAGCTTCtgcgagaggaaaagagagagcaCCCGCAACAGGAACAC
GCGAATGAGCAAGAAGGGCGACGAGCGGGAAGGTGGCCCTTGCAATTGCG
GGGAGTCTTGGAGCAAGCGGAGAGCGAGTTGGACTCAAGGGCCGTGGGGA
TCTGCCTGGATCGCGCCCTCGAAATGATTGAATCGCGAGCTCAGCGCGCA
AAGACGGAGCGCGATGCAAGGAAGACCGGAGCGGCAGCCGAGGGCGCCCG
GGCTCTGGTCGACACCTGTGTCCGCCTGGTGCGCCCGGCGGGTGAGGCAA
CGTCGCTGGGAGTCGACTTGGTGTGCGTCGTCGTCCCTGTGCTCCGGCGG
CTCGGGGACTCGGCCCATCCCGGCCTTTCAGCGGCCTTGGACGCTCGCTT
CGCGGAAGTTGTCAAGGCATTGCTGGTCTGGGCGCGAGAAgccgcggggg
aggcggtgggggcctgcatggccgtggaggaggcccttCAGGCCTGGGGC
GTGGGTAGTGGCGACCTCTCGCTCTGGGGGCGACATCTGCCCTTGGCCag
atccctcctccaggacatcttggaggaggtgcaagACCTGGGGTCCGAGG
GGTCGGCC back to topCoding sequence (CDS) from alignment at KK037251.1:3958..5165+ >rna8985 ID=rna8985|Name=rna8985|organism=Nannochloropsis gaditana|type=CDS|length=879bp|location=Sequence derived from alignment at KK037251.1:3958..5165+ (Nannochloropsis gaditana)
ATGCCGCGCTTGCCGTctcgtcgccccccccgggagaaggaggactccac
gcccccctccaCAGCCCCGCAACTGCTCTACGATCCAGCCTCTGGCAACC
TTGTTGCACCCTCTGCGGCAAAGTCGcggaccgcgtcctccgacCGCCGC
AGTGACAACCGGCATCGGGACCGACATGGGTCACCCAGACCGGCCCCGGA
GGTGTCCTCTCTGGCCGGCGCGACGCGGCGCCCCTCGTCTCACTCTGGTC
GACAGCGCTCACGACAGGAAGACAGGCAGCTTCtgcgagaggaaaagaga
gagcaCCCGCAACAGGAACACGCGAATGAGCAAGAAGGGCGACGAGCGGG
AAGGTGGCCCTTGCAATTGCGGGGAGTCTTGGAGCAAGCGGAGAGCGAGT
TGGACTCAAGGGCCGTGGGGATCTGCCTGGATCGCGCCCTCGAAATGATT
GAATCGCGAGCTCAGCGCGCAAAGACGGAGCGCGATGCAAGGAAGACCGG
AGCGGCAGCCGAGGGCGCCCGGGCTCTGGTCGACACCTGTGTCCGCCTGG
TGCGCCCGGCGGGTGAGGCAACGTCGCTGGGAGTCGACTTGGTGTGCGTC
GTCGTCCCTGTGCTCCGGCGGCTCGGGGACTCGGCCCATCCCGGCCTTTC
AGCGGCCTTGGACGCTCGCTTCGCGGAAGTTGTCAAGGCATTGCTGGTCT
GGGCGCGAGAAgccgcgggggaggcggtgggggcctgcatggccgtggag
gaggcccttCAGGCCTGGGGCGTGGGTAGTGGCGACCTCTCGCTCTGGGG
GCGACATCTGCCCTTGGCCagatccctcctccaggacatcttggaggagg
tgcaagACCTGGGGTCCGAGGGGTCGGCC back to top
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