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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101305g2.3077.mrna |
| Orig protein id | gnl|cribi|Naga_101305g2.3077 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:632906..633890 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8983 ID=rna8983|Name=rna8983|organism=Nannochloropsis gaditana|type=mRNA|length=1860bp
GATGGAAGAGTGGAAAGCCTTAAAAGAAGCATACTGATAGATGTAGTAGT
TGATCGGCTAATAGTATATGACATATTAATACAACGTAATGTACCTGAAG
AAAAAGGGGGCATCCGAAAGACTTCCCACAAAGACGATTAGGAACTTCCC
GATCCGTTAGACATCCATGAATGACCAACATATTTCCTGCGCACCCAGTT
ATTTTGGGGAAAAGGAAATCCTTATCGTTTTGAAATTGCTCCATATTCTG
GCAACATTCCACGAACAGGTCGGCGCAGAGCACGATTGCCGAGACATTGG
TCATGTGTCCCGGCTGCCAACACCGATCCCCCTCCTCTACCGCCGACGAT
GATGGATGCAAGGATCGCTGCGATAGAGCTGCACGTAGCCCCGTAGTCAG
AAGCAAAGAAAGCAGTGTGGTCGACTGGGTGATGAAGGAAAGGGAAGACA
TGCTGTATTGCCTGCAGTGCGGCTACAGAGCATGTCGCAGGTACCAGCAT
ATCGAAAAGCACTTCTTGGTCACGAACCACTTTCTCGGGGTTGCGCCCTA
CGCTCCAGGAGGGATGGAAGGAGGGGATGGAGGCGGGGGGATTTTCTGCT
TCCTGTGCGGGGACAATGTCTACGATGTGGAGTTTGACCTGATCAGGCTT
TTGTGGGCCCAGGCCCGTTCCAGCGATTCCCGCAGCCTCCTCCGCCGACC
ACCCTCCCTCCGTCCTTCCCTCTTCACCTGGCCTCTCCTTGCACAGCCCA
GCCTTGTTCGACATGCCACGTATGGCCTCCGTGGTTTCTGCAATCTGGGT
AGCACTTGCTTTATGAGCTGTATCCTCCAGGCACTGCTTCACAATCCCGT
CCTCAAAGACTTCTTCCTCCGCCGCCGCCACTCCCTTGCCACGTGCCCGA
AAGCGCAAGGGTCTCGCAAAGCCGCTACCTTGGTCTGGGAAGGAGACACT
ACCGGCGGAGGAAAAGAGGGGGGGCAGGTGGGCGCACGCAACTTGAAGGA
GCCGTGCGCGGTCCACTGGCCCGACCGAGGCGAGCGGTCAAACGGAGAGC
GTCCTGGCCCTACGTCCTCCTCCTTTGTGACCGCACCGTGCCTAGCCTGC
GAACTCCAAGAGCTCTTCCTGCTCGTCAGAAAGAAACGATTGGCCTCATA
GTCGCAAAGACTGTCGAGTCTGTACGAGGAATATGGAATAATGATACGAT
GAGTTCCGTGGGAGACCTTTCATGCAGTAGTTGCTGATCCTGTGGTACTT
CTTTGGATAGATTAGTAGTAAGCAAAGTTAAGGCTGCTCATGATTGGGTG
CCTGTAAGCTTTTTTTCTTTCATTTTTGTTTTCTCCTTCTATCTGATTAT
TCTACCTTTTTCTTCGTTCTTTGGTTGTTAATCGTCTTCTCCCACTGATA
CATGTTAACGAGGCGTATAGGACTTCAAAAAGACTTGCCTGCTAATACCT
ATCTTTTGATTATCCACAATAGGAAAACGTATAAAGTTCCAAAAGACATA
ATAAGCCGTACAGGCTGGGTCGAAAAACGCTGCGTGATTTTTCAATAACA
TATGGTGTCCATTTAGAGTTCATCGATAATTTAAAACATATGATAGATAT
GCTTATATCGACATGATCTTATCATTACTGGCATAAATCTCTCCTTTTTC
CCTTGAGTTGCCCAGGCAAGCGATCCAATAACACCCACAATATTTGTTAC
ACAAACCAGCGTAAGCACATATACTGGGGCTTTCACCAAACTTGGGTTAC
TGTGTCAACAATCCAAAAAAATCATCTGAAATCGCTGATTAGCGTGAAAA
ATTTATGTATACATAGTGAGAAGGAGACTACATGCAATCATTAAAGAAAT
GAAACAAACG back to topprotein sequence of rna8983 >rna8983-protein ID=rna8983-protein|Name=rna8983|organism=Nannochloropsis gaditana|type=polypeptide|length=110bp
ILVDYPSHHTQKLAAVVSGSFIYTSTDAGVSWTEQTAAGSSDWQSIASSS
DGTKLAAVAEPGSIWTSTDAGVSWTEQTAAGSRFWTSITSSSDGTKLAAV
VLGGSIWTYR back to topmRNA from alignment at KK037250.1:632906..633890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8983 ID=rna8983|Name=rna8983|organism=Nannochloropsis gaditana|type=mRNA|length=985bp|location=Sequence derived from alignment at KK037250.1:632906..633890- (Nannochloropsis gaditana)
ATCCTGGTGGACTACCCATCTCATCATACACAGAAGCTTGCCGCCGTGGT
TTCTGGAAGCTTCATCTATACGTCGACCGACGCGGGCGTCAGCTGGACGG
AGCAAACCGCCGCTGGTTCAAGTGACTGGCAGTCGATCGCGTCCTCGTCG
GATGGCACGGTAGGTGTCTGGATGCAGGCCATTACGCAAGGTGCACCAGG
CCCCTGTTCTCGATGGTGGTTCCGTCGTGTGTGCATGTCCCGTCCAGGGT
CGCCATGCGATGCTCGATCTGACGCATCCTGGTGGACTACCCATCTCATC
ATACACAGAAGCTTGCCGCCGTAGCTGAGCCTGGCTCTATCTGGACGTCG
ACCGACGCGGGCGTCAGCTGGACGGAGCAAACCGCCGCTGGTTCACGTTT
CTGGACATCGATAACATCCTCGTCGGATGGCACGGTAGGTGTTTGGATGC
AGGCCATTACGCAAGGTGCACCAGGCCCCTGTCCTCGATGGTGGTTCCGT
CGTGTGTGCATGTCCCGTCCAGGGTCGCCATGCGATGCTCGATCTGACGC
ATCCTGGTGGACTACCCATCTCATCCTGCACAGAAGCTTGCCGCTGTGGT
TTTGGGAGGCTCTATCTGGACCTACCGGTAGATGTGTGCGTGGGGCTGGG
ATAGAATTTTAAAAAAACCAACTTTCATATCTATCCTCGCAAGAAGGGAC
AGGGCCCTTTTTTCCCGGAGAGAGATAGATTGATATTACTATCACACTAT
ACGGGGATATTGACTAAGCAAAAGAAAAAACGGTTGGCTTCTCATTTGCA
TTATGGGTTAGGGTTAGGGTTAGGGTTACTGAATGTAACAGTCGAACTCT
AGGTGCAAGTATTCGTCAGCCCTATATACAAGTCACTCAAATGCCCTTAC
TCAAATGTTCTCTGTAGTATTTGACGAGTGGACACAACTCTACATGTGTT
GAATAAAGAATATGGAAAGTCCATTTTGAAAAGAG back to topCoding sequence (CDS) from alignment at KK037250.1:632906..633890- >rna8983 ID=rna8983|Name=rna8983|organism=Nannochloropsis gaditana|type=CDS|length=999bp|location=Sequence derived from alignment at KK037250.1:632906..633890- (Nannochloropsis gaditana)
AAGCTTGCCGCTGTGGTTTTGGGAGGCTCTATCTGGACCTACCGGTAGAA
GCTTGCCGCCGTAGCTGAGCCTGGCTCTATCTGGACGTCGACCGACGCGG
GCGTCAGCTGGACGGAGCAAACCGCCGCTGGTTCACGTTTCTGGACATCG
ATAACATCCTCGTCGGATGGCACGATCCTGGTGGACTACCCATCTCATCA
TACACAGAAGCTTGCCGCCGTGGTTTCTGGAAGCTTCATCTATACGTCGA
CCGACGCGGGCGTCAGCTGGACGGAGCAAACCGCCGCTGGTTCAAGTGAC
TGGCAGTCGATCGCGTCCTCGTCGGATGGCACGAAGCTTGCCGCTGTGGT
TTTGGGAGGCTCTATCTGGACCTACCGGTAGAAGCTTGCCGCCGTAGCTG
AGCCTGGCTCTATCTGGACGTCGACCGACGCGGGCGTCAGCTGGACGGAG
CAAACCGCCGCTGGTTCACGTTTCTGGACATCGATAACATCCTCGTCGGA
TGGCACGATCCTGGTGGACTACCCATCTCATCATACACAGAAGCTTGCCG
CCGTGGTTTCTGGAAGCTTCATCTATACGTCGACCGACGCGGGCGTCAGC
TGGACGGAGCAAACCGCCGCTGGTTCAAGTGACTGGCAGTCGATCGCGTC
CTCGTCGGATGGCACGAAGCTTGCCGCTGTGGTTTTGGGAGGCTCTATCT
GGACCTACCGGTAGAAGCTTGCCGCCGTAGCTGAGCCTGGCTCTATCTGG
ACGTCGACCGACGCGGGCGTCAGCTGGACGGAGCAAACCGCCGCTGGTTC
ACGTTTCTGGACATCGATAACATCCTCGTCGGATGGCACGATCCTGGTGG
ACTACCCATCTCATCATACACAGAAGCTTGCCGCCGTGGTTTCTGGAAGC
TTCATCTATACGTCGACCGACGCGGGCGTCAGCTGGACGGAGCAAACCGC
CGCTGGTTCAAGTGACTGGCAGTCGATCGCGTCCTCGTCGGATGGCACG back to top
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