|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100669g1.768.mrna |
| Orig protein id | gnl|cribi|Naga_100669g1.768 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:623724..624628 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8979 ID=rna8979|Name=rna8979|organism=Nannochloropsis gaditana|type=mRNA|length=2423bp
ATGACCGAAGACAGTGTTCTGCAGCGGCGGCAGCTCTTGAACCAAGCCTT
GCGGGCAAGGACGACAAGGAGGACGGGCACGTTGAGGGGGAAGGAACGGG
GGCGAGAGCCGGCGCCGAAGGCGGGGGAGGAGGGGGTGGAGGGGGAGGAA
GGGGAAGCAGCAGACCCGGGCGGGCTGGAGGTGTTGTTGAGTCAACTGAC
AGGGCCCAAGATCACGTCGGACATGCAAGCTTTCAAGGCCGCGAATCCCC
ACGCCGTCCTGGCCGATTTCCTTCGGTGGCAGGTCCCCGAGGCCTGGGTG
CCGGGGGAGGGCGGGGTGGAGGGGGAGGCCGAAGGCGAGGCGGAGGAGGT
GGCGATGGAATGGGGAAGTTTGGGGCACTTGGACCGGGCACAGGTAGAGG
CGCATTGGAATTTGCCTCTGGGTCGGCTGGTTGCCTTCTGGAGAGAGGCA
CCGGCCATCCCCGCCGCCCGGCAAGCCCCTCTCTTCCAGGAGGCCCTCGC
GGCCGAGCAAGTGCTGCATTTCCTAGAGACGTTGTCGCCCGCCTCCCTCC
TTTGCCAGGCCTTGGCCGCGGGTTTTGCCACCGTCCTTTGCCTCCTCCGC
CACGCCCCGACCCCGACCGTGCACGGGCCCGCCACTCAGGCGGCTCTCGA
CCAATTGGAGGGACTGATTGACGAGGCTATCAGTCACCTCCATGACCACC
AAACCACGTCGGAGGCCATGCTCTTCCCCCCTCCCTCCTCCTCCCCTTCC
CGCCCTCCCTCCCCTCCTTCCAGAGGACCGGTCAGCCAGGCGTGTTTGAC
GGCGTGCGAGCGCGTCTGCTTAGCCGTTGCCCGGATCGAAAACCGATTGC
GGTGCACCACGGCCCTTTGGCAGGTCCTCCCGGCTCAAATGCGTCTCATC
GAAGGGATGGTGGAGGGGTGGGAGGGAGGGGAAGGAAAAGGCAGGGGGGG
AGAGCGGGCGCCCATGCCATTGCGAGACGATTCGGAGCGGACGGCGGTCT
TAAAGTTGTTCAACAGTGCCGGTGGTTTCGTGGAGGGGGGCGCTCTGTTG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGACAAGGGTGGGGAGGA
GGGGGAGGAGGGAAAGAAGGTTGAGGAGGGGGAGGAAGACGGCGAGGGAG
CGAATGGAAGGGAAAGGAAGAAGGAGGGAGGGATGGTTGTGCTTCGAAAA
GAGAAAGGAAGGAATCAAGAAGGGAGAAGGGGGGGAAGGGAGGGAGAGGA
GGAGGAGGAGGAGGAGCTCTTGCACGAGTACAGCGACAGGCAGGAGAGAC
GGCGGAGCAAGCTCTCTTCCTGTTCTGACTTGCCGATACCTGCAAGAAGG
ATCATGGCGGAGAAGAAGGACAGGGACGGGGGGGGAGGAAAGAAAGGGGC
CGACCGCCAGGAGGAGGGAGGGAAGCAGGGGGAGGAAGGGGAGGAGGACG
CCCTCCCTCCCTACGTGGAGGCTGGCATGCCCTCCCCTCCCGAAGTGAAG
ACTTACGTCCTCAGGCTCACGGACATGAATCCCTTCTACCCCAGAATGGC
GCCCGGAGAGGGGGAGGGAAGGGGGGGAGGGAGGGAGGGCGGGCGGATGA
GAGAGGGGCTTGCCTCCTCCTTGGCCGTGACCAGTCGGCTGTTCGCTTCA
ATGGACAGGAAGGAAGACAGCCTGCGCTTGGCCCTGGCGCATGCCGAGTC
CGAGGTGTAGGGACAACAAGGAAGGAGGGAGGGAGGGAGAAAGAGGGTAA
GGGCGCAGGGTCACGGAGGGGTGGAGGAGACGGGTCATGTACAAAGCTTC
GGTAATAAAGGCCCCGGCCACAAAAGGAACATCAACGCCCATAAGTACAG
GAACAAAAAGGCCAACGAAGCGTCCCCCGAAACAGTTTCTCGGCACCCTT
CTTTGCGTCCTCTACCCATGACAGGCGTGGCGGCCCATATTCCCTCGCGC
CTCCCACCCGCCACCCCCCTCATCGCCTTAAGCCCGCCGTGCTCCTCCCC
CCGTCCAGGGACAGCCACGCGGAGGGTAAAGCCGGGGTGAGGACTCTACC
GACAAAGGACTTTTTTATTCACGTGCTGCAAATTGCCAAACTGAAAACCA
CCCTCCGGGACCGAGTCAAGTTTCCTTCCCCGCCCTCGTCCCGTATGCCC
CCAGATTTCTCTGCATCGCCCTCCCTTGTCCTTGTTGCTTCACAAGTCCT
CTCCATATCCTACCCTCCTCCTTCGCGCCCCCAAAAGTTCTCTGCAGATG
ATCTTCTCTGCGTACCCTACCCCCGCTTCCTCCACTGCAAATGATCCAAC
CCCCCCTTTAAAGAGGCATCCATACCATCTTTCCGTTCCCCTCTCCCCTG
GGGCCAACCCCCTCTTTCCCCCCTTCAATTACCCACCCCCATCTCAGCCA
TCCCCTTGGACAGGCCCTCCACC back to topprotein sequence of rna8979 >rna8979-protein ID=rna8979-protein|Name=rna8979|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MEQEKDEWAWEEEGKDKPQGVPEERRNPINNGEREMQEKKNMQACMTKLN
EESLRQNVVPFLSVSTSCKTEGGGPQGVEVGRLEGIIGKKEIEDEPDGEG
GQEGEGSGHREEEERQEEKASGREEEEQLEERAGSDQEEGKGEEGEVMDD
AKGEEKREGNGRGTVENAEDEGEGSTEGRGMEVEGEEKEEEGEEEGEEKE
EEEGEEEEEEEEEGEGRRRRRKEKERR back to topmRNA from alignment at KK037250.1:623724..624628- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8979 ID=rna8979|Name=rna8979|organism=Nannochloropsis gaditana|type=mRNA|length=905bp|location=Sequence derived from alignment at KK037250.1:623724..624628- (Nannochloropsis gaditana)
TGACAGGCAACGAGTAGGATAGGACGGTGTCTTCCTTGCCTAGGGCAGAC
TCGGTGGCGGTATAGTTGGGGAAAGTTGGTTACGACGACTGAGGAGGTCG
AAGGCCCCACTTTCGGAAACCACCACAGAGTGGATAGGGGAAGGATTTAA
AAAACCACACGCAGGACTGTGCGGGCGAAGGAAAGTAAATCGGGCCACGG
AAGTATACACGTGGTGCAGGGATGGAGCAGGAAAAGGATGAGTGGGCATG
GGAGGAGGAAGGAAAGGACAAGCCCCAAGGGGTGCCTGAAGAGCGGCGTA
ACCCTATTAATAATGGAGAAAGGGAAATGCAGGAGAAGAAAAATATGCAG
GCATGCATGACAAAATTGAATGAAGAAAGTTTGCGGCAGAACGTCGTCCC
GTTTTTGTCCGTTAGTACCTCGTGTAAGACCGAGGGAGGGGGTCCGCAGG
GGGTGGAAGTGGGCCGCCTGGAAGGAATAATAGGGAAGAAGGAAATCGAG
GATGAACCGGATGGAGAGGGTGGACAAGAGGGGGAGGGGTCGGGCCATCG
GGAGGAAGAGGAGCGACAGGAGGAAAAGGCATCAGGGAGGGAGGAAGAGG
AGCAGCTGGAAGAGAGGGCAGGAAGCGATCAGGAAGAGGGAAAGGGAGAG
GAGGGGGAGGTGATGGACGATGCAAAGGGAGAGGAGAAGAGAGAGGGGAA
TGGGAGGGGAACTGTGGAAAATGCAGAGGACGAAGGCGAGGGGAGTACGG
AGGGTAGAGGGATGGAGGTGGAGGGGGAAGAGAAGGAGGAGGAGGGAGAG
GAGGAGGGGGAGGAGAAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGGAGAAGGGAGGAGGAGGAGGAGGAAGGAGAAGGAGAGAA
GGTAA back to topCoding sequence (CDS) from alignment at KK037250.1:623724..624628- >rna8979 ID=rna8979|Name=rna8979|organism=Nannochloropsis gaditana|type=CDS|length=684bp|location=Sequence derived from alignment at KK037250.1:623724..624628- (Nannochloropsis gaditana)
ATGGAGCAGGAAAAGGATGAGTGGGCATGGGAGGAGGAAGGAAAGGACAA
GCCCCAAGGGGTGCCTGAAGAGCGGCGTAACCCTATTAATAATGGAGAAA
GGGAAATGCAGGAGAAGAAAAATATGCAGGCATGCATGACAAAATTGAAT
GAAGAAAGTTTGCGGCAGAACGTCGTCCCGTTTTTGTCCGTTAGTACCTC
GTGTAAGACCGAGGGAGGGGGTCCGCAGGGGGTGGAAGTGGGCCGCCTGG
AAGGAATAATAGGGAAGAAGGAAATCGAGGATGAACCGGATGGAGAGGGT
GGACAAGAGGGGGAGGGGTCGGGCCATCGGGAGGAAGAGGAGCGACAGGA
GGAAAAGGCATCAGGGAGGGAGGAAGAGGAGCAGCTGGAAGAGAGGGCAG
GAAGCGATCAGGAAGAGGGAAAGGGAGAGGAGGGGGAGGTGATGGACGAT
GCAAAGGGAGAGGAGAAGAGAGAGGGGAATGGGAGGGGAACTGTGGAAAA
TGCAGAGGACGAAGGCGAGGGGAGTACGGAGGGTAGAGGGATGGAGGTGG
AGGGGGAAGAGAAGGAGGAGGAGGGAGAGGAGGAGGGGGAGGAGAAGGAG
GAGGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGAAGGGAG
GAGGAGGAGGAGGAAGGAGAAGGAGAGAAGGTAA back to top
|