|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101008g1.2154.mrna |
| Orig protein id | gnl|cribi|Naga_101008g1.2154 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:617975..619061 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8977 ID=rna8977|Name=rna8977|organism=Nannochloropsis gaditana|type=mRNA|length=389bp
CAGCCTCTCTTGGACGGCAAGAACATGCTCTTGCAGGCGCAATCAGGACA
TGGGAAGACAGCCATATTCGCCACGGCCATCCTGAACAACATAGACACGA
ATGCCCCTGCTAAGGAGGCGATCCAGGCCATTGTCCTGGTGCCTAACCGG
GACCTTGCGCGACAGGTGACGGCCGAGATCGAGTCCTTGGGCCAGTACCT
GGAGCCGCCGCTCCGGATCCAATGCTGTGTTGGCTCGCCTAACACGAAGA
CGGAGGAAGCGCGCGACGAGCGCATTGCCCTGGTCAAGACACTCCGGATC
ACACCCCCCCCACGTCCTGGTGGGGACCATGGGGAGGATTGTCGACCTGG
CGGAGGTAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGG back to topprotein sequence of rna8977 >rna8977-protein ID=rna8977-protein|Name=rna8977|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MQRIGRVGRFGRAGTAISIIPPYQVDKSSGRNYSIQHITEAYHNTINRWD
FLQGDYPPRDPFVLQLPGFGIEQDLLNGAREAEAEAAAEAGVEGLSKGMA
EMGVGN back to topmRNA from alignment at KK037250.1:617975..619061+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8977 ID=rna8977|Name=rna8977|organism=Nannochloropsis gaditana|type=mRNA|length=1087bp|location=Sequence derived from alignment at KK037250.1:617975..619061+ (Nannochloropsis gaditana)
GCAGGAACATTGTAAGACTGTGGATCGATGGGGCATGTGACATCGTGgtg
tctcctcttccactgATGTCGattcctcccgtccttccctccctccctcc
ctcccttcctctctccctccctcccaggcctcggTGGTGATCAATTTCGA
CCTGTGCGACCCCCAGCGCTACATGCAGCGCATCGGCCGTGTCGGGCGCT
TCGGACGCGCGGGGACAGCCATTTCCATCATCCCGCCCTACCAGGTCGAC
AAGAGCAGCGGCCGCAACTACTCGATCCAGCATATCACCGaggtacctcc
ctccctccctccctcccggcctcgctccctcgtATCCCCCCGTTCTCaac
gccttttccctcccgcccctcttgtctccctcccttcaggccTACCACAA
CACGATCAACCGATGGGACTTCCTGCAGGGCGACTACCCCCCCCGGGACC
CATTCGTCCTCCAACTCCCGGGTTTTGGGATCGAGCAAGACCTCTTGAAC
GGGGCCCgcgaggcagaggcggaggcagcggcggaggcaggggtggaggg
cctgTCCAAGGGGATGGCTGAGATGGGGGTGGGTAAttgaaggggggaaa
gagggggttGGCcccaggggagaggggaacggAAAGATGGTATGGATGCC
TCTTTAAAGGGGGGGTTGGATCATTtgcagtggaggaagcgggggtaGGG
TACGCAGAGAAGATCATCTGCAGAGAACTTTTGggggcgcgaaggaggag
ggtaggatATGGAGAGGACTTGTGAAGCaacaaggacaagggagggcgat
gcAGAGAAATCTGGGGGCATacgggacgagggcggggaaggaaacttGAC
TCGGTCCCGGAGGGTGGTTTTCAGTTTGGCAATTTGCAGCACGTGAATAA
AAAAGTCCTTTGTCGGTAGAGTCCTCACCCCGGCTTTACCCTCCGCGTGG
CTGTCCctggacggggggaggagcacggcgGGCTTAAGGCGATGAGGGGG
GtggcgggtgggaggcgcgAGGGAATATGGGCCGCCACGCCTGTCATGGG
TAGAGGACGCAAAGAAGGGTGCCGAGAAACTGTTTCG back to topCoding sequence (CDS) from alignment at KK037250.1:617975..619061+ >rna8977 ID=rna8977|Name=rna8977|organism=Nannochloropsis gaditana|type=CDS|length=642bp|location=Sequence derived from alignment at KK037250.1:617975..619061+ (Nannochloropsis gaditana)
ATGCAGCGCATCGGCCGTGTCGGGCGCTTCGGACGCGCGGGGACAGCCAT
TTCCATCATCCCGCCCTACCAGGTCGACAAGAGCAGCGGCCGCAACTACT
CGATCCAGCATATCACCGaggccTACCACAACACGATCAACCGATGGGAC
TTCCTGCAGGGCGACTACCCCCCCCGGGACCCATTCGTCCTCCAACTCCC
GGGTTTTGGGATCGAGCAAGACCTCTTGAACGGGGCCCgcgaggcagagg
cggaggcagcggcggaggcaggggtggagggcctgTCCAAGGGGATGGCT
GAGATGGGGGTGGGTAAttgaATGCAGCGCATCGGCCGTGTCGGGCGCTT
CGGACGCGCGGGGACAGCCATTTCCATCATCCCGCCCTACCAGGTCGACA
AGAGCAGCGGCCGCAACTACTCGATCCAGCATATCACCGaggccTACCAC
AACACGATCAACCGATGGGACTTCCTGCAGGGCGACTACCCCCCCCGGGA
CCCATTCGTCCTCCAACTCCCGGGTTTTGGGATCGAGCAAGACCTCTTGA
ACGGGGCCCgcgaggcagaggcggaggcagcggcggaggcaggggtggag
ggcctgTCCAAGGGGATGGCTGAGATGGGGGTGGGTAAttga back to top
|