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Properties
| Property Name | Value |
|---|
| Product | two component transcriptional family |
| Orig transcript id | gnl|cribi|Naga_100303g9.771.mrna |
| Orig protein id | gnl|cribi|Naga_100303g9.771 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:580313..582018 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8961 ID=rna8961|Name=rna8961|organism=Nannochloropsis gaditana|type=mRNA|length=1634bp
TCGCTCTCGTAAAAGTTTTGGCCGGACAGCTATCAAAGACACGATAGTTT
ACCTCCCCATCCCCCTTTCCGCTAAACCACACAGGCAGTAGGCTTCTGCT
TTCTTTTTCGATCGGACGTCGAGAGATGTCAGAGCCCTATCATTGGTCAG
TCAGGAGAAGAGGGCCCTTAAACCATGTGAGACTCCTGCTCTTGGCCGTT
CTGGCAATCATGGTACCCGTGCCTGCGTTTGTCTCGATCTTTCCTGCTCC
GCCTCGGGCGCCGCGTCTACATGCTGGTGGCGGAGGCAACAGCGTAAATC
GGGAAGAATTGCGGAAAAGCCTGGTTGCCGAAGGCCTTGACGACATCTTG
GCGGCACGCGCCGTGGAGGCAGCGGACAAAGCCGTCAGCATCTGGGAAAT
GCAGGTGATAGACTTTTGTCGGCCCCCCGAGGTAGCGACCATGACCAGAG
TCCTTGGTCGGGTCGCCGACCTGTCTATCACCTGTGGCGGAGGCTTTCCC
CAAGCTGAACGGCAACGTGTATTTTTCTCTCGTGCGCTCGACTATGCAGT
GGACGAGGAAGACGCACGCAAGGAACGGGGAGGCTACCTAGCTGCCATTT
CCGTGGAAGGTAACTTTATTTTCGATCGGGCCACCCACCGGGATTTTCTG
GGCGCATTGCTGGGGACAGGCATAGCAAGGGAAAAGGTAAGCTCTGGTCG
GGGCTCAGAAAAGCGTGCAGGAGAGGAGATTTGCCGGACAGATGATTGGA
TTGGAAGGGCTTGTGATGGGGTCGGAGGGGCTTGTCAAGTCACCCAACGG
ATAAGACATGGTGCCCGGTACATAAAGCACCGGCCCCTGGTGTCATAGGA
AGCCCCACGCCACGCCCCTGGGGTTGTCTAACTCCCGGCTTCCCGGCGCT
CGGCATGAACAGGTCGGAGACATATTGCTCCAAGGCGAACGCGGCGCGCA
TGTGGTCGTGGCGCCTGACGTTGCCGAATATGTGGTGCTCTCTCTGGCCG
CGGTTCGAAGTGTGCCTGTCAAGAACAAGCCCATTGCCTTGGCTGACTTG
GGAGTGCGGCCGCCCGTCACGAAGGAGGTTCGTGTGGGAGTCAGGGAAAG
AGGGCGGGGGGGAGGGAGGACGAGGAGGGGTGAGAGGGGTAAAATCGATG
AATATTGATGGTTATTGACTCAAAAGTAGTGCTGTTGAATGAGAGATATG
GTAGGACGGCCTCCCGAGCCCTTTAAGCCTTGCCTTCTTATCCTCGTCAC
ACCCTGACCTACCCGTGTAGATGCAATCTGTGGAGGCCTCCATGCGCCTG
GACGCCGTCGCCAGCGCCGGGATGGGGATGAGTCGGAGTAAATTGAAGGA
TATGATAGAAGGCGGAGACGTCCTAGTCAACTGGAAAGAAATCACCTCTG
CGAACGCGCAGCTCAAGGGCGGGGACATTGTAACCATTCGGGGGAAGGGG
CGTTTGGAAGTGAACGAGGTGGAGACGACAAGCAAAGGGAAGTTTCGTGT
AAAGATGACGAAATTTGTCTAATTTTGCGAGGAGTGCAGCATGAAAGAGG
AGTTCATAAGAAGACTGGAACTGTGCAAATTAAAGATTGAATGTGCCAGG
ACTCGAAAACTGAAAGCATAAACACTGTTTAGCA back to topprotein sequence of rna8961 >rna8961-protein ID=rna8961-protein|Name=rna8961|organism=Nannochloropsis gaditana|type=polypeptide|length=318bp
MPSSVQICGRVIPCTAFLPYLLLLLLFPTHCFSFVISLRLCPPSCTKTCL
HAGLTWRADEIYHSQPDFPVLFLATRNESYARDIEGYFSSQGYFVRSCRT
LTRLAKMVQSTRPEGILISDHLSTSHIQGFLTSLKRLPDLWLIPVLIICD
STPTPSPAPSKPIQEGTVRSEEGGELEDSNDRSRRLAMLELGARAVFPPD
RATYPSIQATFTGAAHTRQRVEDLVNTLQGAVLHYAQHQRRLLPSTVTLE
GPPPSFSPTEQAVLNLLCRGMTDAQIAYSLGCSSAAVGNAVRSLLEKLEM
DLRGELIRVALDNDLVTE back to topmRNA from alignment at KK037250.1:580313..582018+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8961 ID=rna8961|Name=rna8961|organism=Nannochloropsis gaditana|type=mRNA|length=1706bp|location=Sequence derived from alignment at KK037250.1:580313..582018+ (Nannochloropsis gaditana)
TCTTCTCCTGACTGACCAATGATAGGGCTCTGACATCTCTCGACGTCCGA
tcgaaaaagaaagcagAAGCCTACTGCCTGTGTGGTTTAGCGgaaagggg
gatggggaggtaAACTATCGTGTCTTTGATAGCTGTCCGGCCAAAACTTT
TACGAGAGCGAAGAGTCAAACCTGTCGTCTCACAACAAAAAACGACTATC
CACGACATGCCTTGGTGCACATACTGCTCGTCCGACGCACCATGCACGGG
CATAGGCCAGCCTTTCACCGGAGTATGACGTCGTCGGCCGTGGCGATTGA
TGTTCCACTCGATACAGCCTCCTTTCCCAAACCCGGACGCTTATTCCTTG
CTGGTGATTACCATGACAGGCGTAAGAAACATGCCATGACAAAGATGCGG
CCTACCTCTTGTCTTCACTCGGAAAGTTGACGTCCATGCCGTCGTCGGTT
CAAATTTGTGGACGCGTTATCCCTTGtacagccttcctcccctacctcct
cctcctcctcctctttcctacCCATTGCTTCTCCTTTGTCATTTCTTTGC
GTCTATGCCCACCTTCTTGTACAAAGACCTGTTTGCATGCGGGTCTTACC
TGGCGGGCGGACGAAATTTATCATTCCCAACCCGActtccccgtcctttt
cTTGGCCACGCGCAACGAGTCCTACGCCCGCGACATAGAAGGATATTTCA
GCAGCCAAGGCTATTTCGTCCGCTCCTGCCGGACCCTCACACGCCTGGCA
AAGATGGTTCAAAGCACACGACCGGAAGGAATCCTCATCAGCGACCATCT
CTCCACGTCCCACATCCAAGGCTTCCTGACCAGCTTGAAGCGACTGCCAG
ATTTGTGGCTGATCCCCGTGCTCATTATTTGCGATTCTACCCCTACCCCG
TCCCCAGCGCCTTCTAAACCCATCCAGGAGGGCACTGTGAGgtccgagga
agggggcgaatTGGAGGTAAGGATATTGGCAACGAAAAAGGATGGGTCGG
GTGCCGGCGCCTGTCATGCTCATGCACGCAGTACCACGCACGTACCTCCC
TGGTGACACCTCCACCGCTCCACGTCGCATCTTTACAACACAGGACTCGA
ACGATAGGTCTCGGCGTCTGGCCATGCTGGAGCTAGGCGCCCGTgctgtc
tttccccccgaccGGGCTACCTACCCAAGCATTCAAGCCACCTTCACTGG
CGCGGCCCATACCCGGCAACGCGTGGAAGACCTGGTCAATACCCTGCAAG
GTGCCGTCCTCCACTACGCGCAACACcagcgccgcctcctcccgtccacc
GTGACCTTGGAAGGACCGCCgccgtccttttcccctacgGAACAGGCGGT
CTTGAATTTGCTCTGTCGGGGCATGACGGATGCGCAGATTGCCTATTCCC
TTGGGTGCAGCTCAGCGGCGGTGGGCAACGCAGTCCGGTCCTTGTTGGAG
AAGCTGGAGATGGACCTGCGGGGGGAGctcatccgggtcgccttgGACAA
CGACCTGGTGACAGAGTAGGGGGCCGGCGTCCCCGTTGGTTTCTTGTTGT
CGGGGGGTGgtgaaaggggggggagcttaggaaggaaaggagttCTTCAG
TCATGAAGGAGAgccttcatttcctcttAACCGCGCATGCGAGGGGGGGT
GATGGAGTCGTCTCTTTGTCGGCAGACAAAAGTACCCATGAACACACGTG
CTCAGG back to topCoding sequence (CDS) from alignment at KK037250.1:580313..582018+ >rna8961 ID=rna8961|Name=rna8961|organism=Nannochloropsis gaditana|type=CDS|length=1914bp|location=Sequence derived from alignment at KK037250.1:580313..582018+ (Nannochloropsis gaditana)
ATGCCGTCGTCGGTTCAAATTTGTGGACGCGTTATCCCTTGtacagcctt
cctcccctacctcctcctcctcctcctctttcctacCCATTGCTTCTCCT
TTGTCATTTCTTTGCGTCTATGCCCACCTTCTTGTACAAAGACCTGTTTG
CATGCGGGTCTTACCTGGCGGGCGGACGAAATTTATCATTCCCAACCCGA
cttccccgtccttttcTTGGCCACGCGCAACGAGTCCTACGCCCGCGACA
TAGAAGGATATTTCAGCAGCCAAGGCTATTTCGTCCGCTCCTGCCGGACC
CTCACACGCCTGGCAAAGATGGTTCAAAGCACACGACCGGAAGGAATCCT
CATCAGCGACCATCTCTCCACGTCCCACATCCAAGGCTTCCTGACCAGCT
TGAAGCGACTGCCAGATTTGTGGCTGATCCCCGTGCTCATTATTTGCGAT
TCTACCCCTACCCCGTCCCCAGCGCCTTCTAAACCCATCCAGGAGGGCAC
TGTGAGgtccgaggaagggggcgaatTGGAGGACTCGAACGATAGGTCTC
GGCGTCTGGCCATGCTGGAGCTAGGCGCCCGTgctgtctttccccccgac
cGGGCTACCTACCCAAGCATTCAAGCCACCTTCACTGGCGCGGCCCATAC
CCGGCAACGCGTGGAAGACCTGGTCAATACCCTGCAAGGTGCCGTCCTCC
ACTACGCGCAACACcagcgccgcctcctcccgtccaccGTGACCTTGGAA
GGACCGCCgccgtccttttcccctacgGAACAGGCGGTCTTGAATTTGCT
CTGTCGGGGCATGACGGATGCGCAGATTGCCTATTCCCTTGGGTGCAGCT
CAGCGGCGGTGGGCAACGCAGTCCGGTCCTTGTTGGAGAAGCTGGAGATG
GACCTGCGGGGGGAGctcatccgggtcgccttgGACAACGACCTGGTGAC
AGAGTAGATGCCGTCGTCGGTTCAAATTTGTGGACGCGTTATCCCTTGta
cagccttcctcccctacctcctcctcctcctcctctttcctacCCATTGC
TTCTCCTTTGTCATTTCTTTGCGTCTATGCCCACCTTCTTGTACAAAGAC
CTGTTTGCATGCGGGTCTTACCTGGCGGGCGGACGAAATTTATCATTCCC
AACCCGActtccccgtccttttcTTGGCCACGCGCAACGAGTCCTACGCC
CGCGACATAGAAGGATATTTCAGCAGCCAAGGCTATTTCGTCCGCTCCTG
CCGGACCCTCACACGCCTGGCAAAGATGGTTCAAAGCACACGACCGGAAG
GAATCCTCATCAGCGACCATCTCTCCACGTCCCACATCCAAGGCTTCCTG
ACCAGCTTGAAGCGACTGCCAGATTTGTGGCTGATCCCCGTGCTCATTAT
TTGCGATTCTACCCCTACCCCGTCCCCAGCGCCTTCTAAACCCATCCAGG
AGGGCACTGTGAGgtccgaggaagggggcgaatTGGAGGACTCGAACGAT
AGGTCTCGGCGTCTGGCCATGCTGGAGCTAGGCGCCCGTgctgtctttcc
ccccgaccGGGCTACCTACCCAAGCATTCAAGCCACCTTCACTGGCGCGG
CCCATACCCGGCAACGCGTGGAAGACCTGGTCAATACCCTGCAAGGTGCC
GTCCTCCACTACGCGCAACACcagcgccgcctcctcccgtccaccGTGAC
CTTGGAAGGACCGCCgccgtccttttcccctacgGAACAGGCGGTCTTGA
ATTTGCTCTGTCGGGGCATGACGGATGCGCAGATTGCCTATTCCCTTGGG
TGCAGCTCAGCGGCGGTGGGCAACGCAGTCCGGTCCTTGTTGGAGAAGCT
GGAGATGGACCTGCGGGGGGAGctcatccgggtcgccttgGACAACGACC
TGGTGACAGAGTAG back to top
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