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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100303g1.770.mrna |
| Orig protein id | gnl|cribi|Naga_100303g1.770 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:567179..568433 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8954 ID=rna8954|Name=rna8954|organism=Nannochloropsis gaditana|type=mRNA|length=2849bp
AATACTACATTTGCTTGTTGATTCGGCCATATCCGCATTTCCTCTGTGCC
TGGTAACATTTTCTATACATTCCTCTTACGCCTTGCGACATATCATCATC
TCTCTTTGATGTACGAGGTCGAGAGACCTCAGGCGAATGCGGCGCTGGAG
GCCAAAATATGATGCCCGGAATAGTTACAGTACATCAAGTCATCCACAAG
TTTTTAAAACACGTTAAAAAGCCATAGAACATGCGTAGAAGCTCCAGCTC
TCATTTGATTGTGCGCAAGGACGGCCAGCCCTTTTTGTATGTGGGGCAAG
AGACAGCAAAAGCGTCACGTCACGCACGTTGGAGAGAGTGTTCTCGATAC
TTCCATAGAACAATGTGTCTTTGTAGGATGGCATTTGTATGACGACGAAG
TGACCAGGTGTCTGGACAATTGCACGATCTTTCTGTGTGTAGAATACAGC
GCCATGTTTGGGGATTTAGCAGTCATTCTTGTCTTGACTTCTTTCCAAAC
TCATACCAAGCCTCACCGATTTTTCCTTGAAAATCGTCTCGCACCCCGCA
GTCTCATGACCACAAGCCGCAGCAATGAGGAGTGGGTCCTGGCGTCCTAC
CCCGAAGGTGTGCCCACGCCTGACAACTTCCGTAAACAAATCTGCCCGAT
GCCCGTGCCCGGTCCTTCGCAAGTGCTGGTCAAAACTTTGTGTTTAAGTG
TGGACCCCTACCTGCGCTTGAAGCTGTACCCCGTGCCCACTGAATCAAGC
ACCGACACGGCGGCTACGAAGGGGCAAAATGCGAACAATAAGGACGAGGA
GGATACGAGTGAATTTGCGCCGTTTAAGCTAAACAAGCCCTTAAGTTCCA
TGTTTATCGGCGAGGTCGTCAGCACAGGCTCTGATGTGACGGGTTTTGCA
GCCGGGGACCGCGTCTCGGGCCTTGGCGTCTGGGCGACTTTTGCAGCTTT
TGAGGCCAACACTCTTCGCAAGGTGCCCTCTGACCTCCCACCTTCGGCCT
ACCTTAATGTTCTGGGGTTGATTGGGCTCTCTACCTACTTCCCCCTGGTG
GAAATCGGGCAGCCCAAGGCAGGGGAGACGGTGTACGTCTCGAGCGCGGC
CGGAGCCGTCGGGTCCCTGGTGGGCCAGCTCTGCAAGCTGTGGGGATGCA
GAGTAATCGGGTCGACAGGCTCGGACAACAAGGCGGAGGCCCTAAAGGCC
TTAGGCTTCGACCACGTCTTCAACTACCGGACACAGACCGTGGCGGCCGC
CTTGGAGGAATGGGCTCCGGAGGGCTTAGACCTGTACTGGGACAATGTAG
GGGGGGCGACGCTGGACACGGTTTTGACCAAAATGAAGCGCCAGGGTCGA
ATCGTCGCCTGTGGAAGCATTTCCCAGTACCACGTGTTGGGTTCGGAGGC
CGCGTACGGGGTGAGAAATTACTTCAAAGTGGTGGCCTCCTGCCTAAAAT
GGCAAGGCTTCCTCGCCTCGGACTATGTCGGGCGGTCGGACGAATTATTC
CTGAAGCTGGGGAAACTGCTGCGGGAGAAAAAGATTAGGGCCTTGGAGAC
GGTGTGGGAGGGACTGGAGAAAGTTCCAGAAGCTTTCATCGGCCTCTTTT
CCGGGAACAATCTGGGAAAGATGTTGATCCAAGTCGCGGAGCCCTCGACG
CCCACAGGCCCGGGAGAAGACAAGGAGGCGGAGAAAGGGGGGGGAGCCAG
GGAGGCAGGGCTGCGCAGCAGGGCTTTGGAGCCTGGGGGGCTGGGGCTCG
AAAAGGAATTGGCCGAGGTCCGGGAGATGGCGGGTCTGGCCCATGGGGCC
CAAGTGAAAGCCGCCCTGGCCGCCTTGGGCGCGCGTCTGGAGAAGGACCT
GGCCAGCGTTTCCGCCCCGCCCGCCTCTTCCATCCCCGCCGCGGCGGCTC
CAGCCAAGGAGCCTGTCTCCCGGGGGAGCGCGTCGCCCTCCGACTTGGTG
GCGGGCTTGGCGCCCACGTACACTGCCATCGATACCTACGGCTGGGACCA
GGGGGAGTACAACAGTCCTTGGGTGTCCGTCTACGTGACCCTTCCTGGGG
TGGGCAAGGTCAAGGAGCGGGTCTTCTGCTCCTTCGGCCCCACGTCCTTC
GACCTGAAGGTGGAGGGCTTGGCAGGGAAGAACTACCGGCTCTTGAAGGA
CAACCTCGAGAAGGAGATCGTGGCGGGGGAGAGCAAGTTCAAGGTCAAGG
AAGGACGGGTGACGGTGCTGTTGAAGAAGAAGAAGGGAGAGTTCGGGTCG
TACGATCATTGGATGGGGTTGACAGCTAAGACGAAGCCAGGGGGGGGAAC
GGGGGGGCCGGGCTGGGGAAGGGGGACCCCATGGGCGGATTAATGGACAT
GATGAAGCAGATGTACGAGGAAGGCGACGACACGATGCGAAAGACGATCG
CGGAGTCCATGATGAAAGTGCAGCGCGGGGACAGAAGCGGGAGCGGATTG
CCCGAGTTTGGGAAGGGGGGCTTAGGAGAGGACGATTTCTAGGAGGGCGG
AGGGCGCCTCAGAGGAGCGTGCTCGGCTTTCGAACCGCTCAATAGGTACC
GGAGGAGGGCATGATGAGCTTGTGCGAGCGAGGCGACGCTTTGAGGGGGA
AGGAGGGAACAGACTTGGGGGGGGTAGCGGCTAGTGGAGGGGCGGGAGGG
ATGCGGAGGGCGTGAATCAAAAGAGCAGGAAAAGAATGAAGAAGAGGAAG
AACACGTGGGAAAACACTGTCCAACAGGGTGTTTCTGCGTGGGAAAGACA
AGAGGGCGCTCCGGATCAGCAGTCTTTGATTCCTACTTCGTTACATTGCG
TGCCACCTCCCCCTGGCCATGGTCCACCGCAAATCATGCCGTACCCACC back to topprotein sequence of rna8954 >rna8954-protein ID=rna8954-protein|Name=rna8954|organism=Nannochloropsis gaditana|type=polypeptide|length=338bp
MIAELEAPPISSRLPPSRSSPSSSDDGGTPARTSSSSSPARPFPAAAAPR
STPPLPPRPLPPPPFSSSARFPSSTVPTSPPLSSTTLPPTAAMPASNRGH
LRSSSPPFSPPASSPPSSSARTRPLSTSLPSESGPANGSLLPSSSSNSRT
SPSSNGLRGGGNDTSTPASQVSANLRVIGLEGRQKLALKEKRIGEVDEQG
GKKRAEEEKEEEEEEVVVLGTVRVRRGGQKGGQASGTRMRRGRGGGTGGG
EEGVRGAGGKEGLAGGGSRDGSPSSIRGAGGRGRQKEGRGSARLGRDEGG
GDECRGTSRGRSRKEKERKEEGGRGGGGRDLKVFDFDG back to topmRNA from alignment at KK037250.1:567179..568433+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8954 ID=rna8954|Name=rna8954|organism=Nannochloropsis gaditana|type=mRNA|length=1255bp|location=Sequence derived from alignment at KK037250.1:567179..568433+ (Nannochloropsis gaditana)
ATGATCGCCGAGTTGGAGGCGCCCCCCatctcttcccgcctccctccttc
cagaagctccccgtcttcctccgacgACGGCGGCACACCGgcccgaacct
cctcctcgtcctcccctgcccgccctttccctgccgccGCGGCCCCCCGg
tccacccctccccttccccctcgtccccttcctccaccaccattctcctc
ctcagcccgtttcccctcctcgaccgtcccgacctccccccccctttcct
ccacgacccttccccccactgCCGCCATGCCCGCTTCCAACCGCGGGCAC
CTCCGAagttcttcccctcccttttcccctcctgcctcctcccctccttc
ctcctctgcccggACGCGCCCTCTTTCAACCTCACTCCCGTCGGAATCAG
GGCCGGCGAACggaagcctccttccttcctcctcctccaactctcgaacc
tccccctcttccaacggtctacgaggaggaggaaatgacaCGTCCACGCC
CGCATCGCAAGTCTCTGCGAACTTGCGGGTGATCGGCCTGGAAGGGCGCC
AAAAGCTGGCtttgaaagaaaagaggatcggggaggtggatgagcaaggg
ggaaagaagagggcagaggaggagaaggaggaggaggaagaggaggtggt
agtGTTGGGAACAGTCAGGGTCCGCCGTGGAGGGCAAAAGGGTGGGCAGG
CGAGCGGGACAAGgatgaggagaggaagagggggaggtaccgggggaggg
gaggaaggagtacggggagcaggagggaaagaggggctggcggggggagg
aagtcgtGATGGAAGCCCTTCCTCAATCCGGGGTgctggcgggaggggga
ggcagaaggaggggcgtggtTCTGCTCGGCTCGGTCGGgatgaaggtgga
ggtgatgaGTGTAGAGGCAcctcgagggggaggtcccggaaagagaagga
gaggaaggaggaaggaggtaggggggggggggggagggacctCAAGGTGT
TTGATTTCGATGGataggagggcggaaagaagCCTCAAGAAGGTGCGTGA
GGCAGAGCTTGCGAGGGACGATTGATCGAtgaggacagggggggctGGTG
CCGAGGGACGCAAGAGTCGGTGGCGCGGGACGTAAGCGTCTCAGAACGAG
cacggaaagagggaggggaagaacaGGACATCGTGAAAGCCTGCCCTTCA
GCATGTGAATAACATACAACCTGCGAtcaaagaaagcaaaaatgATCCAC
AACCC back to topCoding sequence (CDS) from alignment at KK037250.1:567179..568433+ >rna8954 ID=rna8954|Name=rna8954|organism=Nannochloropsis gaditana|type=CDS|length=1017bp|location=Sequence derived from alignment at KK037250.1:567179..568433+ (Nannochloropsis gaditana)
ATGATCGCCGAGTTGGAGGCGCCCCCCatctcttcccgcctccctccttc
cagaagctccccgtcttcctccgacgACGGCGGCACACCGgcccgaacct
cctcctcgtcctcccctgcccgccctttccctgccgccGCGGCCCCCCGg
tccacccctccccttccccctcgtccccttcctccaccaccattctcctc
ctcagcccgtttcccctcctcgaccgtcccgacctccccccccctttcct
ccacgacccttccccccactgCCGCCATGCCCGCTTCCAACCGCGGGCAC
CTCCGAagttcttcccctcccttttcccctcctgcctcctcccctccttc
ctcctctgcccggACGCGCCCTCTTTCAACCTCACTCCCGTCGGAATCAG
GGCCGGCGAACggaagcctccttccttcctcctcctccaactctcgaacc
tccccctcttccaacggtctacgaggaggaggaaatgacaCGTCCACGCC
CGCATCGCAAGTCTCTGCGAACTTGCGGGTGATCGGCCTGGAAGGGCGCC
AAAAGCTGGCtttgaaagaaaagaggatcggggaggtggatgagcaaggg
ggaaagaagagggcagaggaggagaaggaggaggaggaagaggaggtggt
agtGTTGGGAACAGTCAGGGTCCGCCGTGGAGGGCAAAAGGGTGGGCAGG
CGAGCGGGACAAGgatgaggagaggaagagggggaggtaccgggggaggg
gaggaaggagtacggggagcaggagggaaagaggggctggcggggggagg
aagtcgtGATGGAAGCCCTTCCTCAATCCGGGGTgctggcgggaggggga
ggcagaaggaggggcgtggtTCTGCTCGGCTCGGTCGGgatgaaggtgga
ggtgatgaGTGTAGAGGCAcctcgagggggaggtcccggaaagagaagga
gaggaaggaggaaggaggtaggggggggggggggagggacctCAAGGTGT
TTGATTTCGATGGatag back to top
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