rna8947, rna8947 (mRNA) Nannochloropsis gaditana

Overview
Namerna8947
Unique Namerna8947
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1180
Alignment locationKK037250.1:541711..542032 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100213g3.9989.mrna
Orig protein idgnl|cribi|Naga_100213g3.9989
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:541711..542032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100213g3gene8673Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8947rna8947-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21755.1cds8917Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8947 ID=rna8947|Name=rna8947|organism=Nannochloropsis gaditana|type=mRNA|length=1180bp
TGCGAAGTTTTCTGCGGTCTCACTCGCATCATAATACTCACCGCAGGAAA
AATGCATTATGACGCGCGCTCCGAGCTGGAGGAGCTCATTAAAGAACGTG
ATAATCTTGAGACCGAGGCTGCAGTCATCAAGGATTTCCTAACTTCACCT
GGGCCTGGCGGGGCTGCCCCCCCGGGCTTGGGCGGAGTGCCGCTTGTGGA
CGCAGAGGGATTTCCAAGAGCGGATATCGATGTTTGGGATGTACGGGTGA
AACGAAATCGACTGGCATGCATCGACACAGATCATGCAGAGCTCATGAAA
CGGATCGAGGAGCTGGTTCAACGGCTTCATCAGGAGGCCAAGACCAGCGC
GGGAGTGCGAGGAATGAGCAACAATTGGAGCACAAGTAGCAGCACTGGGA
GGGATATTGGGGCTCTATCATACACCCGCACGGAGGAATCTCAAGTCGAG
ACAGTTCCTAAGCCTACCGCATGTATGGAGGTGGAAAACAGGTCCATGGA
AGAAGGAGGGGGACCGTCACGTCAACAGCCATTCGCGGTCATAGATCAAG
TGTTTCGTGCCTCTCCAGCAGAGGAAGCGGGGTTGAAAAATGGTGATCTG
CTCGTCTCTCTGGGCACTGTGAATGCCCAGAATCACAACAACTTTGCGGC
CATCGTAGCCTTGGTCCAGGAAAACGAGGGGCGCGTGCTTCGGGTGGAAG
TGCAACGACCCCAAGAAGCTTCGGCCGGAGGCCCGTCGTCTGCGCCGAGG
AAGGAGACCGTGGTCATGTCATTGATCCCACACGCATGGAGCGGGCGAGG
ACTGCTCGGATGTCATCTGACAGCCGTGTCGTCTTGAGGGTCCTGGCAGG
GCGGGGGAGGCCGGGAACAAAGCGGGATGAGACACGGGGAGGATGTTGTA
CAGGGGCACGTTGTCGAAAAAGGGCCGTCCGGAGGGGAGTGGAAGTGGTT
GGAAGGGTCTCCAATACCACGTTTTCCCAGCTCGAAGCAAGGAATTGTGC
ACGCCTGTCATGGAGGCCTTACTTTTCCTATGTACGAGAAGTTTGCGGAG
ACAAAAGGGCCCCGGGACGCACCAGGAGAGACCGAGACGTAAGGGAACAG
CAAAATAGGTCCATGGGTGCCTTGAATACCCCACAAGAGCCATTAAAAGT
CTAAGGCAGCATAACTAGACAGCCCAGACC
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protein sequence of rna8947

>rna8947-protein ID=rna8947-protein|Name=rna8947|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MRGRMDVYVSRQELVTNSKSRGKGGASCEEKEAKNVEFPWSVPRWIKCMI
SSTARTVCTNQAVGLGQTP
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mRNA from alignment at KK037250.1:541711..542032-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8947 ID=rna8947|Name=rna8947|organism=Nannochloropsis gaditana|type=mRNA|length=322bp|location=Sequence derived from alignment at KK037250.1:541711..542032- (Nannochloropsis gaditana)
ATGCGTGGTCGGATGGACGTGTACGTCAGCCGCCAAGAGTTGGTAACTAA
CAGCAAAAGCAGGGGAAAGGGGTAAGTTGTGCGGGGAGCACGAACCTGGA
AACCTCAAAATTCTTAGGACAATGACAGACGGACCAAAAAAATATGGGTA
CTTTAGGATGTATTGATTAGAATGCACGTCAAGAGGGGCATCGTGTGAAG
AAAAGGAAGCTAAAAATGTAGAGTTTCCTTGGAGTGTTCCTCGATGGATT
AAGTGCATGATTTCCTCAACCGCACGCACCGTTTGCACTAATCAAGCGGT
GGGGCTTGGTCAAACACCATGA
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Coding sequence (CDS) from alignment at KK037250.1:541711..542032-

>rna8947 ID=rna8947|Name=rna8947|organism=Nannochloropsis gaditana|type=CDS|length=420bp|location=Sequence derived from alignment at KK037250.1:541711..542032- (Nannochloropsis gaditana)
AGGGGCATCGTGTGAAGAAAAGGAAGCTAAAAATGTAGAGTTTCCTTGGA
GTGTTCCTCGATGGATTAAGTGCATGATTTCCTCAACCGCACGCACCGTT
TGCACTAATCAAGCGGTGGGGCTTGGTCAAACACCATGAATGCGTGGTCG
GATGGACGTGTACGTCAGCCGCCAAGAGTTGGTAACTAACAGCAAAAGCA
GGGGAAAGGGAGGGGCATCGTGTGAAGAAAAGGAAGCTAAAAATGTAGAG
TTTCCTTGGAGTGTTCCTCGATGGATTAAGTGCATGATTTCCTCAACCGC
ACGCACCGTTTGCACTAATCAAGCGGTGGGGCTTGGTCAAACACCATGAA
TGCGTGGTCGGATGGACGTGTACGTCAGCCGCCAAGAGTTGGTAACTAAC
AGCAAAAGCAGGGGAAAGGG
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Synonyms
Publications