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Properties
| Property Name | Value |
|---|
| Product | Spc97/Spc98 |
| Orig transcript id | gnl|cribi|Naga_100298g3.7626.mrna |
| Orig protein id | gnl|cribi|Naga_100298g3.7626 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:526755..528027 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8940 ID=rna8940|Name=rna8940|organism=Nannochloropsis gaditana|type=mRNA|length=1327bp
CAAACCCTCGAAGTGTCTATCTACAGTCGTCGACGTACGTGTCCGAATCT
CAGCATCTAGCCAATCTATATTTTCCTAATAGGCGAACATTTGTACCACC
ACCAGCGTTAAAGCAGCAAATATTTCAGTGTGGCCACAACAAGGCCTTAA
AAGCACAGCTTAAAGCTTTTAAAAAGGAATTTTTGGTCGTGGGCCGGAAC
TTACGTCGCGTCGCGCAGAGCTATACGTTGGTGCTGAGATATTTCCACCG
CTAGCATCTATCCGATGATAAAAACATTGTCAATGATGTTTGGAGAGGTT
GGAATAATTGTAAATTGGTGGGATGTACTGGTCACCGTAGTCTTTTTTTC
CGTCGTCCTCCTCTGCTGGTACCAGGCAATGTGTTCCTATTTCACCCAGA
CGAGCAAAGACGGACAGGGTCCTTCCCAAAAGCAAAAGGCCTGGTTCCTC
TCTTTCTTTATCTCCTGTCTATCGACCCCATTGGGCGTGTATTATTTGTC
GCGTGCTCTTTCGCCGGAGTGGGATGCTTCGGAGATGCTTGACACGGACG
CTTTTTCTCGCAGCGTTTTGACACTGTTTTGGGTGTACTTGATCGTAGAC
ATGGCTGTTGGTTATTTTGAATATCCAGGAGAATTCGGGTTGCTGAGCGG
CTGGGTGCACCATATTTTTTACGCGCTGTTTCTGGGCTATGCCTACATGA
AGGGGTACTCCATTTCCTTTACCCACACGTTGATCATGGAATCCTCCTCC
ATTTTTCTATCGGGAGGTCGGCTCTTCCCTCGCTTGAGGTCAGATTGGGC
CTTCGGGTGCCTTTTCCTTCTCTTTCGAGTGGTGTATCATCTCTACTTGC
TCCTGAAGCTCTATAGCCTTCCCGCCCCCCGGGGCGACCTCTGGCCGCCA
GTCGCAGGGGTCTGGGTGTTACATCTCTACTGGTTTCGGGGATGGATGCA
GGGCATGCGACGAAGGGCACAGCAGAGCAAGACGGGCGAGGCGTCGTCAT
CGATGGCATCCCCCTGTGGCGACTCCCGGGATCCGGAAGGGGAGCCGGTG
AAACGGGAGAAGTCCGCTTAACGGCAGCGGAGAGCCCGCCAAATGGGGGG
CGGGGCTCAGGCATGATGGAGTTCGGGGACGGAAGTAACACGCTGCCATG
CACCGTGATGGCACTGTGTAGCCTTTGTCGGAGACCCGAGGGGCCTTTAA
GGGGGGGAGCCCTCATGTCGAAAGCCGCTGGCCCGAGAGGCCGTGGCCTG
TATCATAAAATTTTAGAACAAAGCGAGAAATTGACAATTTCAAGGAACGC
AAAGTAACTCGCCAAAACAATCCTGTC back to topprotein sequence of rna8940 >rna8940-protein ID=rna8940-protein|Name=rna8940|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MGPWGRSGKRRKGKVSGRRLDLMKLEAVLSHQCDSVERTAVAFFLDEGAF
LGHIRGLRRLLLGAGCALTSEFVSLLQTRQQEEAALEGPRPADVWPAFEA
AVSALGLESDAYLRCFSYRLRRRVDVRAGQRSRGMATGEQGDGEDGSSCT
DGEGGEGLGALEDLDADYLPPWPLGTVLPQTTIQTYVRVHELLLRVHWSL
QQVQRTRESVRVALKHMGRGEEAKGKRSAPRPSGEQGSVRKEKGVFALRC
AHVLLYRLSLVASAFLEHMAAVVDGLGWRALEGALARGVPPLPPPSPTPS
PPPTKAWEGPESRGMGREGGRRRQHTA back to topmRNA from alignment at KK037250.1:526755..528027- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8940 ID=rna8940|Name=rna8940|organism=Nannochloropsis gaditana|type=mRNA|length=1273bp|location=Sequence derived from alignment at KK037250.1:526755..528027- (Nannochloropsis gaditana)
GAGCTTGACGGCATGGGCCCTTGGGGTCGGTCAGGAAAAAGGCGCAAAGG
GAAGGTTTCGGGGCGCCGCTTGGACCTGATGAAATTGGAAGCCGTCCTGT
CCCATCAATGCGACTCGGTGGAGCGGACGGCGGTCGCCTTTTTTTTGGAC
GAAGGGGCCTTCCTCGGACACATTCGAGGCCTCCGTCGGCTCTTGCTGGG
CGCGGGGTGTGCCCTGACCTCGGAGTTTGTCTCCCTTTTGCAGACTCGCC
AGCAGGAGGAAGCTGCGCTGGAGGGCCCGCGACCGGCGGATGTGTGGCCC
GCCTTCGAGGCGGCGGTGTCGGCCTTGGGCCTGGAGAGCGATGCCTACCT
GCGGTGTTTCTCGTACCGGCTCCGACGCCGGGTGGACGTCCGGGCTGGGC
AAAGAAGCAGGGGCATGGCAACGGGGGAGCAGGGAGATGGAGAAGATGGT
AGCAGTTGCACGGATGGGGAGGGAGGGGAAGGACTGGGCGCCCTGGAGGA
CCTCGACGCCGACTACCTCCCTCCCTGGCCGTTGGGAACCGTTTTGCCAC
AGACCACCATCCAAACCTACGTGCGGGTCCACGAATTGTTGCTGCGTGTG
CATTGGTCTTTGCAACAGGTGCAACGGACGCGGGAAAGTGTCCGGGTGGC
GCTCAAGCACATGGGGAGGGGCGAGGAGGCAAAGGGGAAGAGGAGCGCGC
CCCGGCCCTCGGGAGAACAGGGCTCCGTGAGGAAGGAGAAAGGCGTGTTC
GCCCTCCGTTGCGCCCATGTCTTGCTCTATCGCCTCTCCCTGGTCGCATC
CGCTTTCCTTGAGCACATGGCAGCCGTGGTGGATGGGCTGGGATGGCGGG
CCTTGGAAGGGGCCCTGGCAAGGGGTGTCCCCCCCCTCCCTCCTCCCTCC
CCGACGCCGTCGCCTCCCCCCACGAAAGCCTGGGAGGGACCAGAGTCGAG
GGGGATGGGGAGGGAGGGAGGCAGGCGGAGGCAACACACGGCCTGACGGT
GGAGCGGTTGCGGGAGATGCATGCCGCCTACATCCGAGACGTGGCCACCA
GATGTTTTGTGGACCCGGACGGGGGGGTGAAGGGTGAGGGCGACAGGGAG
GGTGGCAAGGCGGGAGGGGAGGACGCAGAGGCCCCGCTGCCGTCATTGCA
GGCAGAGGTAACTTCCTTGATGACGAGCATGGGCCACGCCTGCTCTCAGG
TAGAAGGCCACGTCTTCCGTCTTGTGTGGCACAGGGACAGCCGGGAGCTG
GGGGCTCGAGGGCGCCGACATGC back to topCoding sequence (CDS) from alignment at KK037250.1:526755..528027- >rna8940 ID=rna8940|Name=rna8940|organism=Nannochloropsis gaditana|type=CDS|length=984bp|location=Sequence derived from alignment at KK037250.1:526755..528027- (Nannochloropsis gaditana)
ATGGGCCCTTGGGGTCGGTCAGGAAAAAGGCGCAAAGGGAAGGTTTCGGG
GCGCCGCTTGGACCTGATGAAATTGGAAGCCGTCCTGTCCCATCAATGCG
ACTCGGTGGAGCGGACGGCGGTCGCCTTTTTTTTGGACGAAGGGGCCTTC
CTCGGACACATTCGAGGCCTCCGTCGGCTCTTGCTGGGCGCGGGGTGTGC
CCTGACCTCGGAGTTTGTCTCCCTTTTGCAGACTCGCCAGCAGGAGGAAG
CTGCGCTGGAGGGCCCGCGACCGGCGGATGTGTGGCCCGCCTTCGAGGCG
GCGGTGTCGGCCTTGGGCCTGGAGAGCGATGCCTACCTGCGGTGTTTCTC
GTACCGGCTCCGACGCCGGGTGGACGTCCGGGCTGGGCAAAGAAGCAGGG
GCATGGCAACGGGGGAGCAGGGAGATGGAGAAGATGGTAGCAGTTGCACG
GATGGGGAGGGAGGGGAAGGACTGGGCGCCCTGGAGGACCTCGACGCCGA
CTACCTCCCTCCCTGGCCGTTGGGAACCGTTTTGCCACAGACCACCATCC
AAACCTACGTGCGGGTCCACGAATTGTTGCTGCGTGTGCATTGGTCTTTG
CAACAGGTGCAACGGACGCGGGAAAGTGTCCGGGTGGCGCTCAAGCACAT
GGGGAGGGGCGAGGAGGCAAAGGGGAAGAGGAGCGCGCCCCGGCCCTCGG
GAGAACAGGGCTCCGTGAGGAAGGAGAAAGGCGTGTTCGCCCTCCGTTGC
GCCCATGTCTTGCTCTATCGCCTCTCCCTGGTCGCATCCGCTTTCCTTGA
GCACATGGCAGCCGTGGTGGATGGGCTGGGATGGCGGGCCTTGGAAGGGG
CCCTGGCAAGGGGTGTCCCCCCCCTCCCTCCTCCCTCCCCGACGCCGTCG
CCTCCCCCCACGAAAGCCTGGGAGGGACCAGAGTCGAGGGGGATGGGGAG
GGAGGGAGGCAGGCGGAGGCAACACACGGCCTGA back to top
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