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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100022g3.820.mrna |
| Orig protein id | gnl|cribi|Naga_100022g3.820 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:663172..664073 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna894 ID=rna894|Name=rna894|organism=Nannochloropsis gaditana|type=mRNA|length=219bp
ATGTCCGAGTCCGTCCGTCACCCGACGTCCTTCTTGTTGTCCAAGAACAT
TGCACACTGCGTCAGGACACACTCAACAGTCAAATCACATGTTCGTTACA
ATAAGACAATATTCTATTATGGCAAGGTGTGTATGCTGCGACGCAAAGAA
CACAATGCATTAAGAGGAATGCACCGCTTGTCATATCTTTTTGAGAGACA
GCTCACTAGCATGTGTTAA back to topprotein sequence of rna894 >rna894-protein ID=rna894-protein|Name=rna894|organism=Nannochloropsis gaditana|type=polypeptide|length=229bp
MRMRLTWRAHEMFAVFVSISFIHNEIVDSIISVSLGTACHIFLRDSSLAC
VKWALSLGLWRAPLDVSFVVERVQAAGTTDACQATLNSKVTCSLLLNNNV
AITYITFHLFYEAVARKYFNAFPRQYLDLTRFLGRKNIFIRWVCDKKTLK
PVQASCHSMENHSIPILPNRSLIVVASDWDLLHTTPVPQPAHAQQVKVGG
LRVTALQLSISKNRCDIRRLQLHEIIRKL back to topmRNA from alignment at CM002456.1:663172..664073+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna894 ID=rna894|Name=rna894|organism=Nannochloropsis gaditana|type=mRNA|length=902bp|location=Sequence derived from alignment at CM002456.1:663172..664073+ (Nannochloropsis gaditana)
ATGAGAATGCGACTAACTTGGAGGGCTCATGAAATGTTTGCTGTTTTTGT
ATCCATCTCTTTCATTCACAATGAGATTGTCGATTCTATAATATCTGTAA
GTCTTGGCACCGCTTGTCATATCTTTTTGAGAGACAGCTCACTAGCATGT
GTTAAATGGGCGCTAAGTCTTGGTCTTTGGAGAGCACCGCTCGACGTGAG
GTAACTACAGGGTAAGAAATCCGATTGAACTGCCTCTGGCGACTTCTTCA
GCAGCTTTGTAGTCGAAAGAGTCCAAGCTGGTAAGTGGAAGGGCTAGGGT
TTGTACAAGACCGCCTGTGGTCTTCTTTCACATTAGTTGAAAGGGAAGAA
CTGAGCTGGTACAACCGATGCATGTCAGGCCACACTCAACAGTAAAGTCA
CATGTTCGCTACTATTAAATAATAACGTTGCAATAACGTACATCACTTTC
CACCTGTTTTATGAGGCTGTGGCCAGAAAGTACTTCAATGCTTTCCCACG
GCAATATCTCGATCTGACTCGATTCCTCGGCAGAAAAAACATATTTATTC
GCTGGGTTTGTGATAAAAAAACACTGAAGCCTGTACAAGCTTCATGTCAC
AGTATGGAAAATCACAGTATTCCGATCTTGCCGAATCGAAGCTTGATTGT
GGTGGCTTCGGATTGGGACTTACTCCATACAACACCTGTACCACAGCCTG
CCCAGTATGTTTCCTGGTCCTGGACCAGTTGCAAATTTTATGACGAAAGA
GTCTGTGCTATAGTTGATGTGACGGATGTCAATGCAGCGCACAACAggtg
aaggtgggaggaTTGAGAGTTACAGCACTGCAGTTATCCATTTCCAAAAA
CAGGTGCGATATTCGCAGACTTCAGTTACATGAAATAATCAGAAAACTCT
AA back to topCoding sequence (CDS) from alignment at CM002456.1:663172..664073+ >rna894 ID=rna894|Name=rna894|organism=Nannochloropsis gaditana|type=CDS|length=2760bp|location=Sequence derived from alignment at CM002456.1:663172..664073+ (Nannochloropsis gaditana)
ATGAGAATGCGACTAACTTGGAGGGCTCATGAAATGTTTGCTGTTTTTGT
ATCCATCTCTTTCATTCACAATGAGATTGTCGATTCTATAATATCTGTAA
GTCTTGGCACCGCTTGTCATATCTTTTTGAGAGACAGCTCACTAGCATGT
GTTAAATGGGCGCTAAGTCTTGGTCTTTGGAGAGCACCGCTCGACGTGAG
CTTTGTAGTCGAAAGAGTCCAAGCTGCTGGTACAACCGATGCATGTCAGG
CCACACTCAACAGTAAAGTCACATGTTCGCTACTATTAAATAATAACGTT
GCAATAACGTACATCACTTTCCACCTGTTTTATGAGGCTGTGGCCAGAAA
GTACTTCAATGCTTTCCCACGGCAATATCTCGATCTGACTCGATTCCTCG
GCAGAAAAAACATATTTATTCGCTGGGTTTGTGATAAAAAAACACTGAAG
CCTGTACAAGCTTCATGTCACAGTATGGAAAATCACAGTATTCCGATCTT
GCCGAATCGAAGCTTGATTGTGGTGGCTTCGGATTGGGACTTACTCCATA
CAACACCTGTACCACAGCCTGCCCACGCACAACAggtgaaggtgggagga
TTGAGAGTTACAGCACTGCAGTTATCCATTTCCAAAAACAGGTGCGATAT
TCGCAGACTTCAGTTACATGAAATAATCAGAAAACTCTAAATGAGAATGC
GACTAACTTGGAGGGCTCATGAAATGTTTGCTGTTTTTGTATCCATCTCT
TTCATTCACAATGAGATTGTCGATTCTATAATATCTGTAAGTCTTGGCAC
CGCTTGTCATATCTTTTTGAGAGACAGCTCACTAGCATGTGTTAAATGGG
CGCTAAGTCTTGGTCTTTGGAGAGCACCGCTCGACGTGAGCTTTGTAGTC
GAAAGAGTCCAAGCTGCTGGTACAACCGATGCATGTCAGGCCACACTCAA
CAGTAAAGTCACATGTTCGCTACTATTAAATAATAACGTTGCAATAACGT
ACATCACTTTCCACCTGTTTTATGAGGCTGTGGCCAGAAAGTACTTCAAT
GCTTTCCCACGGCAATATCTCGATCTGACTCGATTCCTCGGCAGAAAAAA
CATATTTATTCGCTGGGTTTGTGATAAAAAAACACTGAAGCCTGTACAAG
CTTCATGTCACAGTATGGAAAATCACAGTATTCCGATCTTGCCGAATCGA
AGCTTGATTGTGGTGGCTTCGGATTGGGACTTACTCCATACAACACCTGT
ACCACAGCCTGCCCACGCACAACAggtgaaggtgggaggaTTGAGAGTTA
CAGCACTGCAGTTATCCATTTCCAAAAACAGGTGCGATATTCGCAGACTT
CAGTTACATGAAATAATCAGAAAACTCTAAATGAGAATGCGACTAACTTG
GAGGGCTCATGAAATGTTTGCTGTTTTTGTATCCATCTCTTTCATTCACA
ATGAGATTGTCGATTCTATAATATCTGTAAGTCTTGGCACCGCTTGTCAT
ATCTTTTTGAGAGACAGCTCACTAGCATGTGTTAAATGGGCGCTAAGTCT
TGGTCTTTGGAGAGCACCGCTCGACGTGAGCTTTGTAGTCGAAAGAGTCC
AAGCTGCTGGTACAACCGATGCATGTCAGGCCACACTCAACAGTAAAGTC
ACATGTTCGCTACTATTAAATAATAACGTTGCAATAACGTACATCACTTT
CCACCTGTTTTATGAGGCTGTGGCCAGAAAGTACTTCAATGCTTTCCCAC
GGCAATATCTCGATCTGACTCGATTCCTCGGCAGAAAAAACATATTTATT
CGCTGGGTTTGTGATAAAAAAACACTGAAGCCTGTACAAGCTTCATGTCA
CAGTATGGAAAATCACAGTATTCCGATCTTGCCGAATCGAAGCTTGATTG
TGGTGGCTTCGGATTGGGACTTACTCCATACAACACCTGTACCACAGCCT
GCCCACGCACAACAggtgaaggtgggaggaTTGAGAGTTACAGCACTGCA
GTTATCCATTTCCAAAAACAGGTGCGATATTCGCAGACTTCAGTTACATG
AAATAATCAGAAAACTCTAAATGAGAATGCGACTAACTTGGAGGGCTCAT
GAAATGTTTGCTGTTTTTGTATCCATCTCTTTCATTCACAATGAGATTGT
CGATTCTATAATATCTGTAAGTCTTGGCACCGCTTGTCATATCTTTTTGA
GAGACAGCTCACTAGCATGTGTTAAATGGGCGCTAAGTCTTGGTCTTTGG
AGAGCACCGCTCGACGTGAGCTTTGTAGTCGAAAGAGTCCAAGCTGCTGG
TACAACCGATGCATGTCAGGCCACACTCAACAGTAAAGTCACATGTTCGC
TACTATTAAATAATAACGTTGCAATAACGTACATCACTTTCCACCTGTTT
TATGAGGCTGTGGCCAGAAAGTACTTCAATGCTTTCCCACGGCAATATCT
CGATCTGACTCGATTCCTCGGCAGAAAAAACATATTTATTCGCTGGGTTT
GTGATAAAAAAACACTGAAGCCTGTACAAGCTTCATGTCACAGTATGGAA
AATCACAGTATTCCGATCTTGCCGAATCGAAGCTTGATTGTGGTGGCTTC
GGATTGGGACTTACTCCATACAACACCTGTACCACAGCCTGCCCACGCAC
AACAggtgaaggtgggaggaTTGAGAGTTACAGCACTGCAGTTATCCATT
TCCAAAAACAGGTGCGATATTCGCAGACTTCAGTTACATGAAATAATCAG
AAAACTCTAA back to top
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