rna8932, rna8932 (mRNA) Nannochloropsis gaditana

Overview
Namerna8932
Unique Namerna8932
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1161
Alignment locationKK037250.1:515033..515578 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100188g13.2454.mrna
Orig protein idgnl|cribi|Naga_100188g13.2454
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:515033..515578 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100188g13gene8661Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21771.1cds8902Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8932rna8932-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8932 ID=rna8932|Name=rna8932|organism=Nannochloropsis gaditana|type=mRNA|length=1161bp
ATGAGTGTGATCCTGGGATCGAAAAAGGGCGATCATGATGCGCACCGATA
CGACCATAGAAGTGAGCAACCTGCCCATAAACATAGACATATCGCAAATC
TTGACATACTGGGGATAATAAGGCTGGAAGAAGCACACGCAGGATGTAAG
AAAGGGGGTGGCTTGCGACGACGAGACTGGAGGGCAGCGAGCCTAAGGGA
TAGAGGGGGTAAACACCGACCAAAGCAAAGAAGAGGAAGTGGAAATGATA
TGGCTATTTTTCTGTTTGACGACAACTCAAGCATGAACGGTAAAGGTGCT
ACATTAGAAAACACATTTTTCCAGTCCAATGTACCGGGTCGCTACACAAG
TTGGACCGAAGATGGTCACCACGCTGTTTCAGATGGTTTTGAGAAGGGCG
AGGACGAGCAGCCATGGTCTTTTAATGCAGAAGATTGCATCATGGAAATG
CGATGTCCTCCGAACCGACACGGTGATAGATTTGGCTCTAAAACTGGTCC
CAAAGGTGTTTTGGCAGATTATAAAGCCCATGCTAAGGCTATGCAGGACT
TGAAAAGAGAGGAAAACGAGCATCGACAATATGTGCTTTTTCGTATCGCA
GACGGCGGTACCAGCAAATCAAAAACAAGGATAGAGTCCTCGAGCTGGCC
GAACATCTTGGATTCAAAGGATGAAGACAGCCCATCAATCAATGCTGGAG
ATGATGACTTCGTTGAGTTGCAACGCGTGCGCTGGCTGGCAGATATGAAG
CAGCTATCAGTGCAGCAAGCGGCCGTAAGACCCCGTATCCTGTTTGGAGA
GGTCGAAGAAACTTCAGGGACAGATATGGTCGATAAGATTGATGCCCTTT
TGGAATCCTCTCCTACAACAAAGGTTGTCGTGCACGTCTACGAGCCTCAT
CTTCCCGCTTGCCGACTCCTAAATTCCATTCTACCTTATCTGGCTCGAAA
TTATCCTGCCGTTTGTTTTCTGCGCCTCCATCAAGGACTCAATCTTCCCC
GTAGCAATTTACGTTTAGACACCGCAGCACTTCCCATGCTACTGGTATAT
GAGAAGGGGGAAGTACAGGAATGTGTGGCCCAAGTGGATGCGTGTTTGGG
TGCAGCCTTCTTGTGCGAAGACGTGGAGGGCCTGCTGGAGGAGAAAGGTG
TCTTGGGGTGA
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protein sequence of rna8932

>rna8932-protein ID=rna8932-protein|Name=rna8932|organism=Nannochloropsis gaditana|type=polypeptide|length=181bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTRSTSSSTTSTSSSSTTTTTTTTTT
TSTTSTTTTTTATATTASADAGCDRRGWREGRWKGIVFAASTAATSRWWC
WRRGDNHVAYVGCGDCSVFSAYNVLTCMRLS
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mRNA from alignment at KK037250.1:515033..515578-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8932 ID=rna8932|Name=rna8932|organism=Nannochloropsis gaditana|type=mRNA|length=546bp|location=Sequence derived from alignment at KK037250.1:515033..515578- (Nannochloropsis gaditana)
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAAGAAGTACATCATCGTCAACAA
CAAGTACATCATCATCATCAACAACAACAACAACAACAACTACCACTACA
ACAAGCACAACATCAACAACCACAACAACAACAGCAACAGCAACAACGGC
ATCAGCAGATGCTGGCTGCGACAGAAGGGGGTGGAGGGAAGGGAGATGGA
AGGGGATTGTCTTCGCAGCATCCACCGCCGCTACCAGCAGGTGGTGGTGC
TGGCGAAGGGGGGACAATCATGTAGCCTACGTTGGCTGCGGCGACTGTAG
TGTATTTTCAGCATATAATGTGTTGACTTGCATGCGTCTGTCCTGA
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Coding sequence (CDS) from alignment at KK037250.1:515033..515578-

>rna8932 ID=rna8932|Name=rna8932|organism=Nannochloropsis gaditana|type=CDS|length=546bp|location=Sequence derived from alignment at KK037250.1:515033..515578- (Nannochloropsis gaditana)
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAAGAAGTACATCATCGTCAACAA
CAAGTACATCATCATCATCAACAACAACAACAACAACAACTACCACTACA
ACAAGCACAACATCAACAACCACAACAACAACAGCAACAGCAACAACGGC
ATCAGCAGATGCTGGCTGCGACAGAAGGGGGTGGAGGGAAGGGAGATGGA
AGGGGATTGTCTTCGCAGCATCCACCGCCGCTACCAGCAGGTGGTGGTGC
TGGCGAAGGGGGGACAATCATGTAGCCTACGTTGGCTGCGGCGACTGTAG
TGTATTTTCAGCATATAATGTGTTGACTTGCATGCGTCTGTCCTGA
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Synonyms
Publications