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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100188g8.2461.mrna |
| Orig protein id | gnl|cribi|Naga_100188g8.2461 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:502092..504012 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8927 ID=rna8927|Name=rna8927|organism=Nannochloropsis gaditana|type=mRNA|length=3110bp
ACTGGCAGGCTCATCTATTTTCCAGGGCCCTTTGCACTTCATTACATGGA
GCAGTAGTGCCAATTTGCGGTGGGACTGGCGTCAGGTCTCCTCGCCCCAA
AACTCCTGACAACGATTCACGCCTCGAACTCCACTATGGCAACAGCACCG
TTGACTCGGGGAGAAGGACAGCACGAGCCAGACGGCTATCCGTATCAGTT
GCATAACTTTGAAGATACTGTACAGAAGGCCGTATTTTGTATCAAAGATG
GACTGGATCGATTAATTCGATTTCATCCCGTAGTTGGAAGTCCATGGGCC
AACTGGGCTCATAGGCAACGTCTTCGTACGGTAGGATATATCCTGCCGTG
GCTGGCGATATGGACTCTTATATTATTAACCTTTATCGAGACACCAATGT
GGTGCTTGCGGGATCCAAGCACGTGCGATCCCAGAAGCTCGCAAAGCGAA
CTCTACCCGCGAGTCACGTCTCGTTTCGTAGGACGAGCCCCTGCTTTGAC
GACCGAATTCATCGCCCTGAGCGTATTAGCCGTGGACTACATTTTGCAAA
TAATAGCTGAGGGACTCTTAGTTGTCACATGTCGTCCTTGGGCACGTGGG
TTCTGGCATCAGATGTTGTTGGGTGCCTCTTTTTTGAGCCTTGTAATTTC
TGCCTTGTTTCCCTCCCCATGGACCTTCCGAGTAGCACCGTTTTTGCGAA
TACTATTCCTCGCCACCTACTCCCGCCGCCTCCGACAAGAGATGCAACTG
ATTGTACGAATACTGCCTCAGTTCGGGAAGGCACTTGTGTTGCTCTTATC
CTTCTTCTTAGTCTACGCCATTCTCGGGCTATCTCTTTTTTCATCCACGT
CCAAAAACAAGGCCGACGCGCAAGAAGCAGCCCTATACTTCCCCAACTTT
CGCGGTGCTATCACTAGTGTTTGGAATCTCTTTTTGTACTGGACGTTTCC
GAACATGATGGTCCTTCGGGATCCCGAAACAGGGAAATACTTGCCACCTA
ACGTCGTTCTGACCCTGTGGGTCTTTTCCTTCATGATCATCGTCATATAC
TTCGTTCTCAATTTGGCGCTGGCGATCGTCGTCGACGTGTATAATGAGCA
GAATAGAGAGAGAGAAAAGCGAAGAAAAATGGACAGGCAGGTGAGCATGG
CCCAGGCCTTCTCCCTCCTGGCGGTGCCTTCGGGGTTGCCGCCGCATGGA
AGTTCCGGTCAAGTGGAGGCGTGGGCCGCAGTGGAAGATAGCTTGATGAT
GCCGGCAACAAACGATCCCTTCTTCCGGCCCTTGGCCTCGGTTGCACGCT
CATCTTTCGTTGGGGCATCGGCCTCCATGTCAACGCCTACAGCCGTCTCC
TCTCCTGCTTTGCCTTCCTCCACGGCCCCCGTCCAAGCCGTCCCAGGCCA
CGTCATGCGCCAAGCCCTCCTTCTGCTCTCCACCTTCTCCTCCGTTCCTC
GACTGACCGCGCATACCCTCGACCTCCTCCTCGGCAACCTCACAAAGGGC
GATGACGGCTGGGTACGCAAAGCATCATTCATGCGACTGCCCGACCTTTT
GGCTGCCGTGTCCCGCAAGCAGAACCACCGACAGCCTGGAATGCATCGCC
ACCACTACCATCGACGGCAGCAGAAGCACCATGGGGAGAGAACAATAGCA
CAAGGCGCTTATGTACATGCGGGAGCCGGAGGGGAAGAGGGAGGGGAGGA
CGAGGAGGAGGATGGAGGCGGGGAGGAAGACGAGGGGGAAGGCAGGATGC
GTTTCGTCGACCTGTGGTGCCCGCGGCTGGCATCTTCGCGGATATTTGCG
TACGTCAGTGTCTTCGTGCAAAGCGCCTTCCTGGAGTACTTTATCGACGC
CGTCATCATCGCCAACCTGGCCCTGGCGATTGCGGCCAACGGGAATGGCG
CCCCTCCGTCCAGCCCGGGACCCACGCCTGCTCCCGATCTCACTTCGACG
ACGGTGAGGACGTTGTTCACTATGGGGGCAGAATTTCACGGAGCAGTAGA
GGAGGGAGCTGCGTCCAAAGAAACGCTTTTGTCCCACAGGGATTTCAGTT
TTATGGCCGCGGGCATATTTACCCTCGAAGCCGTGGCGAAGCTCTTTGTG
TACGGTTGGAAGCAATATGTGGCTTCTTACATGAACCTGTTCGATGCCAC
TTTGACCCTTTTGACCGTTGGGGGCGCGATATACGAGGTGGTGGGGAGCT
GCGGGGGCACCGGCCATCAAGGCTCTCAATTCCACCAACCCTTTCTCGTG
TTTGAGCTGCTCCGAATCCTCCGGCTCTTTCGCGCCCTAATGGCCATCCC
ACAGTTTCGGTCCACAGGTCATGCCTTCTTGAAAATCCTTCCCTCCGCCT
CTTCCCTCTTCCTTAACCTTTTCGCGGTGACCTTCCTGTTTGCGGCTTGC
GGCCTGGAAATCTACGGAGGCCTGGTGAACACCGACCCCGCCCGCCCCCA
ACTATCGGTGCTAACTCCAACTTACTACTATGAAAATGGTCTCTTTCTAT
TTAATTTCAACGATCTAGGCGGGGGTTTCATTATTCTGGTTGAGATCCTT
ATCGATTCCTCTTTAATCCAGCCATTCTATGAGGCTTTTGGAGCCTTGGT
AGAGGGAAATGGGGCAGGAGCGCGCGTGGGTACGCTCATATTCTTTGTAC
TGTACTACTGCATTGGACAGCTCGTGGTGCTCAACATTGTCGTCGCCTTT
ATCTTGGATGCATTTATGTATGAATCTGAGAAAGAAGAGGAGGGATTGGA
AGAAAACAGAGCTTCAAGACGGGCGATGAGGCGCCAACCAGAAGGTGGGG
AATTAAGTCGTGAGAAGGGGTCGCTCTAGCATTCGTCAGAAGAAAACGTA
GACGGGAAGGAAGACATGAGATTCTGGCGCGCCTTAGCTTTAGAGCAGGA
AAACTCCTTCAAGTAATTCTTATGTCTATATAAAAGTGGCGACAGTTCTA
GCGTCACGCCAAAATCACGCGTCATCATAGGCTGAATAGCTCGCATTGCC
TTGAGTATGAGGGATCATATTGGGAAAATTTGAAAAGAGTAAATGATGCA
GCTTTGAATGGTCATGTACAGCGCATAAATGAATAAATGAAAAGAAATGG
CAGACATACT back to topprotein sequence of rna8927 >rna8927-protein ID=rna8927-protein|Name=rna8927|organism=Nannochloropsis gaditana|type=polypeptide|length=467bp
MYGYRYKRLKQSRSGKIIRACLLFVALSCRVASSPSKQTTLRHFSASPPL
PATQTITLTPCMPLPVLSNCSAVPMAVQGNLNSCIHISFQSGGFGQNART
AHLSFVFAGEEEEEGHLHDLSHTPTSDLKPAETGELADAKELRTEQEGYL
DIVPAAGATRAARGDGIDFLSPQDGEKIHAKSEKLPASIRRAEKRMTGMK
SNLSGGNPSLTMVLLVGSIFYFPTQAAMYEFMQPKVVAAMREKGFYDPLE
DGPCRPSEDDRDDADANNGSSHSIAGRRDILKDLTSVDRKLQKVRGARQP
LPQTRPEVLQGESESLLNCANVVDVFNHQGGDESSYARLYTCNITSSDPG
GTIPAVHHLSVEGLLPDLFPYTYWVFLNMDPLNPDEPQAPPPPLRALPKG
YQTIRYEATFAPPYAPPPAALGGPLFWILVLITVLYFILSSRYVSSPILD
WLSTTRWGKRQLRGRDG back to topmRNA from alignment at KK037250.1:502092..504012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8927 ID=rna8927|Name=rna8927|organism=Nannochloropsis gaditana|type=mRNA|length=1921bp|location=Sequence derived from alignment at KK037250.1:502092..504012- (Nannochloropsis gaditana)
CGGCTCTTGGGCACGGCAAGGCCCATATCGATTACTCTTTACCTTTCATC
TTATCCCCGCTATTTACCTCTACCTTCCAAAAAACAAATAGAATGTACGG
CTACAGATACAAGAGGTTGAAACAGTCACGATCGGGAAAAATTATACGTG
CATGTCTTCTTTTTGTAGCTTTATCTTGCCGCGTGGCATCATCGCCATCG
AAACAGACAACGCTCCGTCACTTTTCAGCCTCTCCACCATTGCCAGCGAC
CCAAACAATCACATTGACGCCTTGCATGCCATTGCCTGTCTTGAGCAACT
GCTCGGCGGTGCCCATGGCCGTGCAAGGCAATCTTAATTCATGCATCCAT
ATTTCCTTCCAGTCTGGGGGCTTCGGACAAAACGCCAGGACAGCACACCT
AAGCTTTGTCTTTGCGGGAGAAGAGGAAGAAGAAGGTCATCTTCATGATT
TGTCCCATACTCCAACATCAGACTTGAAGCCAGCAGAAACAGGAGAACTT
GCAGATGCTAAGGAACTCAGGACGGAGCAAGAAGGGTATCTTGACATAGT
TCCCGCGGCAGGGGCGACGCGTGCGGCTCGAGGCGACGGCATTGACTTTC
TCAGCCCTCAAGACGGCGAGAAAATCCATGCAAAGAGTGAGAAGCTACCC
GCGAGTATTAGAAGAGCCGAAAAGAGGATGACGGGAATGAAATCGAACCT
CAGCGGTGGCAATCCCTCCCTAACCATGGTCCTGTTGGTCGGTTCAATCT
TCTACTTCCCGACTCAAGCGGCCATGTATGAATTTATGCAGGTATGACGA
CCGAGGGCACAAAGTTAGATAATGCATGAGGAATTCAGTATTCTACCTCT
GTGAAACTCACACTCTTCACCTACGTTCCTCACAGCCGAAAGTGGTCGCT
GCCATGCGGGAAAAAGGTTTCTACGACCCATTGGAGGATGGGCCCTGTCG
GCCCAGTGAGGATGACCGCGACGATGCTGATGCCAATAATGGAAGCAGTC
ATAGCATAGCCGGCAGAAGAGACATTCTCAAGGATCTCACGTCGGTTGAC
AGGAAGCTGCAAAAAGTACGCGGGGCACGACAGCCGCTGCCACAAACGCG
ACCGGAGGTACTGCAGGGGGAGAGCGAATCTCTCCTAAATTGCGCGAACG
TTGTCGATGTCTTCAACCATCAGGGCGGAGATGAGTCCTCGTACGCGCGC
TTGTACACATGCAACATCACCTCCAGCGACCCGGGAGGGACAATCCCCGC
AGTCCACCATTTGTCGGTCGAGGGGCTCCTCCCCGACCTCTTCCCCTACA
CCTACTGGGTCTTCCTCAACATGGATCCCTTGAATCCTGACGAGCCACAA
GCCCCTCCTCCGCCCCTCCGGGCTCTCCCGAAAGGATATCAAACCATCCG
CTATGAAGCCACATTCGCGCCACCTTACGCTCCTCCACCGGCGGCCCTGG
GCGGACCCCTCTTTTGGATATTGGTTTTGATCACCGTGCTCTACTTCATC
CTGTCCTCTCGGTATGTTTCAAGCCCCATTTTGGATTGGCTTAGCACAAC
TAGGTGGGGCAAGCGACAGTTGCGGGGAAGAGACGGCTGAATGGAAGGGA
GACAGATGGCGGGTCTCATTTTAGTTCATATCAGTCCTATTATGGGGGCA
GTTTTTGTGTGTGCGGCGAGTGGAGCAAGGATTGATGGGTGAATGAAAAA
AGCTGCCTCTGCATCAATTTAACTTGAGTGAGGAAAGGAGATATGTGGAT
TTCCTGTTTGTATGTGTGGAGGACAAAGGAGACCATATATATTGCCGGCA
AAACGCCTTGATTCGAAAGAAGTTGGCTGAGCTTTGTAATTGAGTATGGA
ATGTCCGGTCACACAGCGTGTAATATCTATCCACGTGCAAGTGTGAAACA
ATAAATAATCTGACACAGACA back to topCoding sequence (CDS) from alignment at KK037250.1:502092..504012- >rna8927 ID=rna8927|Name=rna8927|organism=Nannochloropsis gaditana|type=CDS|length=2808bp|location=Sequence derived from alignment at KK037250.1:502092..504012- (Nannochloropsis gaditana)
CCGAAAGTGGTCGCTGCCATGCGGGAAAAAGGTTTCTACGACCCATTGGA
GGATGGGCCCTGTCGGCCCAGTGAGGATGACCGCGACGATGCTGATGCCA
ATAATGGAAGCAGTCATAGCATAGCCGGCAGAAGAGACATTCTCAAGGAT
CTCACGTCGGTTGACAGGAAGCTGCAAAAAGTACGCGGGGCACGACAGCC
GCTGCCACAAACGCGACCGGAGGTACTGCAGGGGGAGAGCGAATCTCTCC
TAAATTGCGCGAACGTTGTCGATGTCTTCAACCATCAGGGCGGAGATGAG
TCCTCGTACGCGCGCTTGTACACATGCAACATCACCTCCAGCGACCCGGG
AGGGACAATCCCCGCAGTCCACCATTTGTCGGTCGAGGGGCTCCTCCCCG
ACCTCTTCCCCTACACCTACTGGGTCTTCCTCAACATGGATCCCTTGAAT
CCTGACGAGCCACAAGCCCCTCCTCCGCCCCTCCGGGCTCTCCCGAAAGG
ATATCAAACCATCCGCTATGAAGCCACATTCGCGCCACCTTACGCTCCTC
CACCGGCGGCCCTGGGCGGACCCCTCTTTTGGATATTGGTTTTGATCACC
GTGCTCTACTTCATCCTGTCCTCTCGGTATGTTTCAAGCCCCATTTTGGA
TTGGCTTAGCACAACTAGGTGGGGCAAGCGACAGTTGCGGGGAAGAGACG
GCTGAATGTACGGCTACAGATACAAGAGGTTGAAACAGTCACGATCGGGA
AAAATTATACGTGCATGTCTTCTTTTTGTAGCTTTATCTTGCCGCGTGGC
ATCATCGCCATCGAAACAGACAACGCTCCGTCACTTTTCAGCCTCTCCAC
CATTGCCAGCGACCCAAACAATCACATTGACGCCTTGCATGCCATTGCCT
GTCTTGAGCAACTGCTCGGCGGTGCCCATGGCCGTGCAAGGCAATCTTAA
TTCATGCATCCATATTTCCTTCCAGTCTGGGGGCTTCGGACAAAACGCCA
GGACAGCACACCTAAGCTTTGTCTTTGCGGGAGAAGAGGAAGAAGAAGGT
CATCTTCATGATTTGTCCCATACTCCAACATCAGACTTGAAGCCAGCAGA
AACAGGAGAACTTGCAGATGCTAAGGAACTCAGGACGGAGCAAGAAGGGT
ATCTTGACATAGTTCCCGCGGCAGGGGCGACGCGTGCGGCTCGAGGCGAC
GGCATTGACTTTCTCAGCCCTCAAGACGGCGAGAAAATCCATGCAAAGAG
TGAGAAGCTACCCGCGAGTATTAGAAGAGCCGAAAAGAGGATGACGGGAA
TGAAATCGAACCTCAGCGGTGGCAATCCCTCCCTAACCATGGTCCTGTTG
GTCGGTTCAATCTTCTACTTCCCGACTCAAGCGGCCATGTATGAATTTAT
GCAGCCGAAAGTGGTCGCTGCCATGCGGGAAAAAGGTTTCTACGACCCAT
TGGAGGATGGGCCCTGTCGGCCCAGTGAGGATGACCGCGACGATGCTGAT
GCCAATAATGGAAGCAGTCATAGCATAGCCGGCAGAAGAGACATTCTCAA
GGATCTCACGTCGGTTGACAGGAAGCTGCAAAAAGTACGCGGGGCACGAC
AGCCGCTGCCACAAACGCGACCGGAGGTACTGCAGGGGGAGAGCGAATCT
CTCCTAAATTGCGCGAACGTTGTCGATGTCTTCAACCATCAGGGCGGAGA
TGAGTCCTCGTACGCGCGCTTGTACACATGCAACATCACCTCCAGCGACC
CGGGAGGGACAATCCCCGCAGTCCACCATTTGTCGGTCGAGGGGCTCCTC
CCCGACCTCTTCCCCTACACCTACTGGGTCTTCCTCAACATGGATCCCTT
GAATCCTGACGAGCCACAAGCCCCTCCTCCGCCCCTCCGGGCTCTCCCGA
AAGGATATCAAACCATCCGCTATGAAGCCACATTCGCGCCACCTTACGCT
CCTCCACCGGCGGCCCTGGGCGGACCCCTCTTTTGGATATTGGTTTTGAT
CACCGTGCTCTACTTCATCCTGTCCTCTCGGTATGTTTCAAGCCCCATTT
TGGATTGGCTTAGCACAACTAGGTGGGGCAAGCGACAGTTGCGGGGAAGA
GACGGCTGAATGTACGGCTACAGATACAAGAGGTTGAAACAGTCACGATC
GGGAAAAATTATACGTGCATGTCTTCTTTTTGTAGCTTTATCTTGCCGCG
TGGCATCATCGCCATCGAAACAGACAACGCTCCGTCACTTTTCAGCCTCT
CCACCATTGCCAGCGACCCAAACAATCACATTGACGCCTTGCATGCCATT
GCCTGTCTTGAGCAACTGCTCGGCGGTGCCCATGGCCGTGCAAGGCAATC
TTAATTCATGCATCCATATTTCCTTCCAGTCTGGGGGCTTCGGACAAAAC
GCCAGGACAGCACACCTAAGCTTTGTCTTTGCGGGAGAAGAGGAAGAAGA
AGGTCATCTTCATGATTTGTCCCATACTCCAACATCAGACTTGAAGCCAG
CAGAAACAGGAGAACTTGCAGATGCTAAGGAACTCAGGACGGAGCAAGAA
GGGTATCTTGACATAGTTCCCGCGGCAGGGGCGACGCGTGCGGCTCGAGG
CGACGGCATTGACTTTCTCAGCCCTCAAGACGGCGAGAAAATCCATGCAA
AGAGTGAGAAGCTACCCGCGAGTATTAGAAGAGCCGAAAAGAGGATGACG
GGAATGAAATCGAACCTCAGCGGTGGCAATCCCTCCCTAACCATGGTCCT
GTTGGTCGGTTCAATCTTCTACTTCCCGACTCAAGCGGCCATGTATGAAT
TTATGCAG back to top
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