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Properties
| Property Name | Value |
|---|
| Product | pyruvate dehydrogenase component x |
| Orig transcript id | gnl|cribi|Naga_100065g5.7392.mrna |
| Orig protein id | gnl|cribi|Naga_100065g5.7392 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:468156..469806 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8915 ID=rna8915|Name=rna8915|organism=Nannochloropsis gaditana|type=mRNA|length=2376bp
ATGGAACAGAAAAATAGGCTAAAGAAAAAAAGAATTTTACATTTTGGAGA
CCTCAGCCTTAGTGAGTCGTCGGGGGTGCGGTGGGTGATCAGTCACGGCA
GCATCATGGCCTTTCCAGGGAGCCCGCCTCAGACAAGTGGAGAGGAGGCC
ACCACTACCTCCTCTCCCGCAGCTACGACAGCAATGACCAACGGCAAAGC
ACGCCGAAGTTTGTCCACTTCTGGGCGTACTTCCAGGGCAGCCGCTACAC
CTACCAGCAGGAGCAATCCCTTTGCCAAATTGCGGCGTCTGTCATCCAGA
AAATCCACCACCACCTCAGCCGCTGATGCACGAAGCACCGGCCCCTCCTC
GGCGCCGGCCTCCTCATCCTCCTCTCACTTCTTCCCACCTGTGACATCGC
AACCTGCGCAGACTGGACCCCCTGCTCCAGTCAAAATAGACCGGCCCTTT
TCCACCGTGGCAGGGCTGCGAGACATGCCCAAGTCTTACGAACGGGGCCA
CGAGGTCCCCATTACCTGGTTCGCTGCCATCACCACCTATTTTGGCTATG
CGGTCCTGATCTTGTTCGGACACATCCGGGATTTCTTCGGGCGTTTGTTT
GGGATGTCTAGGTACTTGGCCACTTCACCCCCCCCCGGGTACGCGCCCCT
GCTCAAGGACTGGGAAAACTTCTACACTCGCCGCCTATACCACCGGATCC
GTGACTGCTGGGAGCGCCCTGTGTGCAGCGCGCCGGGAGGGAGGATCACG
GTGGTGGAGCGGGATTCCCCGGACGGGAACAAGACGATGCTCATGACCAA
GCGCACGCGGGAGTGCCTGAACCTGGGGTCGTACAATTACTTGGGCTTCG
CGGACGACTGGCAGACCTCCTGCAAGTCCCACGTCATGCCCACCCTGGAC
AACTTCAACAGCTGTCTGTGCTCGGCGCGCATGGACCTGGGTACGTCCAG
GGAGCACGTCCGCTTGGAGGAGCTCGTGGCTCGCTATGTGGGGAAGGAGG
CGGCCTTGGTCTACAACATGGGCTTCGGGACCAACTCCACCACCATCCCA
GCCCTGGTGGGCCGGGGGAGCTTGATCATCAGCGACACCATGAACCATTC
CTCCATTGTGGCCGGATCCCGGGCCTCAGGGGCTTTGGTCCGCACCTTTG
TGCACAACGACGCGGCCTCCTTGGAACGGGTCCTGAGGGACGCGATTGCC
CGAGGCATGCCTCGGACCCACCGGCCCTGGCGGAAGATCCTGGTGATGGT
GGAAGGGATCTACAGCATGGAGGGGGAGATCTGCAACCTGAAGGGCATCG
TGGAGGTGGTGAAACGCTACGGGGTCTACCTGTACGTGGACGAGGCGCAT
TCCATCGGGGCCCTGGGTGAGACCGGGCGGGGCATCTGCGAGTACGCGGG
GGTGGACCCGGCCGACGTGGACATCCTGATGGGCACCTTCACCAAGAGCT
TCGGCGGCATGGGCGGGTATATTGCGGGGGACAAGGCCCTTATCCAGTAC
CTGCGGCGGGCCAGCGCCGGGAGCGTCTACCACAACTCGCTTTCCACCCT
GGTGTGCAGCCAGGTTTATCGCGCCCTTCGCGTGATCATGGGCGAGGACG
GCACGGACACGGGCCGGCGGAAGATTGCGGCGCTCAGGAACAATTCCAAC
CACATGCGGCGGGAGCTGATCAAGATGGGGTGCCACGTCTATGGGGACTA
CGACTCGCCCATCATCCCGGTGATGCTTTACAACCCCACCAAGATCGCGG
CCTTCTCCCGTGAGGCCTTTATGCGGGGCCTGGCCGTCGTGGTGGTGGGG
TTTCCGGCGACGCCCATCGTGTTGTCACGGACCAGGATATGCGTGAGCGC
GGGGCATACCCGGAAGGAGATCGAGCGGGCCTTGGAGGTGATCGAGGAGC
TGGTGGACCTGCTGCGCTTGCGGTACGCGAATAACGTGATGGGATGAGGG
GAGAAGCGAGGAAGGAAGAAGGGAGATAAATTGGACGAGAAAAAAGACAG
CGCGAGCGCGCTGAAATGCGAGCAGGGTAGGAAGGAAGGAGGGAGGAAGG
AGGGCAAGGTAGTTTGCACTGTATTTATTGCAGGGTATGTGACAATGTGG
CCTGCGTCGTGTCAATTAGAAGGCCCGCAGCAAGTGGGATTCGATCGAAG
AAAGCGTCGAAGCACGCGGTGGGACAAAAAAGAGAGAAAGAAGAGCATGC
AGTGCTGGCAAGAGGCGAGCCTGGTGGGCGCTATGCCTCGCAAAGGGATC
GGATCGAAAGCAAACCAACCCCCTCAAGAGGAAACCACGGCTGGAAGGAA
GGGAAGCAGAGACACGGGGTAACGACACCTCTGATTGCTTGCTCGCCCAT
TAAAAGCTTCATTGACTTCGCGGTAC back to topprotein sequence of rna8915 >rna8915-protein ID=rna8915-protein|Name=rna8915|organism=Nannochloropsis gaditana|type=polypeptide|length=526bp
MMRQRVISFTRRFALKQAASCGTTPHASVSTSRRRLAHMARPLFFLSCSD
GSRPMLNMGFYAGRKSACLMSRRGFADLPEVSTIVMPALSPTMTHGTISE
WTKKPGDVCEAGDVLCEIETDKAVVAFDVQDECVLAKILEEAKGREIQVG
MPVALSVEDKAAYEAFVEADKAGKIATPSTEALPSPTASSTSPPAPSLPA
SPPPSPPTPTAHLGDFALSPAARHLLHSRQLTLSAEVHGTGKGGRLTKGD
VIQAIANGQAQAAAFAAVPPPPPGLDPAQVGIPTIQAGPGTFSDTKNSNM
RKVIARRLAESKATVPHAYETVDCEIDAVLSFRKQMQRDFEVNVSVNDFI
IRSAALALRDVPEANAFWDGPKGTAVLKEDVDISVAVATPAGLITPIISG
SDRRRLSEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSA
VINPPQAAIMAVGRGAKRVRAPPYLPDQHAGNLKPYTATVMTATLSFDRR
VLDEALAAQFLQAFKSYMSRPELLLL back to topmRNA from alignment at KK037250.1:468156..469806- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8915 ID=rna8915|Name=rna8915|organism=Nannochloropsis gaditana|type=mRNA|length=1651bp|location=Sequence derived from alignment at KK037250.1:468156..469806- (Nannochloropsis gaditana)
ATGATGCGCCAGCGCGTCATCTCTTTCACTCGTCGGTTTGCGCTTAAGCA
GGCGGCTTCTTGCGGAACTACTCCTCATGCCAGCGTCAGTACAAGTAGGA
GGAGGCTTGCGCACATGGCGAGGCCACTTTTTTTTCTTAGTTGCAGCGAT
GGGAGTAGGCCAATGCTTAACATGGGCTTTTACGCGGGTAGGAAGAGCGC
CTGCCTCATGAGCCGCAGAGGGTTTGCGGACCTGCCGGAAGTGAGCACAA
TCGTTATGCCCGCCCTCTCCCCCACCATGACGCATGGAACCATCAGTGAG
TGGACCAAAAAGCCAGGAGATGTATGCGAGGCAGGAGATGTGCTGTGCGA
GATCGAAACGGACAAGGCGGTGGTGGCCTTTGACGTCCAGGATGAATGCG
TGTTGGCCAAGATTCTTGAAGAGGCCAAAGGCCGGGAGATTCAGGTGGGC
ATGCCCGTGGCTCTTTCTGTGGAGGATAAAGCTGCCTATGAGGCATTTGT
GGAGGCAGATAAGGCCGGAAAGATCGCAACGCCCAGTACGGAAGCATTAC
CTTCGCCCACGGCTTCCTCGACGTCTCCACCTGCTCCCTCCCTCCCGGCT
TCCCCTCCTCCTTCCCCCCCCACGCCCACCGCGCATCTCGGTGACTTTGC
CCTCTCGCCTGCGGCACGCCACCTGCTGCACAGCCGGCAACTGACCCTGT
CGGCGGAGGTGCATGGGACCGGGAAGGGGGGCAGGCTCACGAAGGGCGAT
GTGATACAGGCTATCGCCAACGGCCAAGTGACTGCCCAAGCGCCAAGGCA
AGCAGCCCCTGCTTCTACCGCCCCCCCCACCCTCAACGCCACCCAAGGCT
CAGGCTGCTGCGTTCGCGGCAGTGCCTCCCCCGCCCCCTGGTCTAGATCC
GGCCCAAGTCGGAATCCCGACCATCCAGGCGGGCCCCGGAACCTTCTCGG
ACACGAAAAACAGCAACATGCGGAAGGTGATCGCACGCCGGCTGGCAGAA
AGCAAGGCGACGGTGCCCCATGCCTATGAGACGGTGGACTGTGAGATCGA
CGCGGTGCTTTCGTTTCGGAAACAGATGCAACGAGACTTCGAGGTCAATG
TCTCCGTGAACGATTTCATCATCCGCTCGGCGGCCTTGGCCCTCCGGGAC
GTACCAGAAGCCAATGCGTTTTGGGATGGACCGAAAGGGACCGCAGTCCT
TAAAGAAGACGTAGATATCTCGGTGGCTGTAGCCACGCCCGCGGGGTTGA
TAACCCCCATCATTAGCGGATCGGACCGGCGGCGGTTGAGTGAAATCAGC
GCGACCATGAAGGATTTGGCGGGGAGGGCGCGGCAAGGGAAGTTGAAGCC
TGAAGAGTTCCAGGGGGGATCATTCACAATCTCAAACCTTGGCATGTTCG
GCATCGATGAATTTTCGGCGGTGATCAACCCCCCACAAGCCGCCATCATG
GCGGTCGGAAGAGGGGCAAAGCGAGTGCGAGCTCCTCCCTACCTACCGGA
TCAACATGCAGGCAACTTGAAGCCTTATACCGCCACGGTAATGACTGCCA
CCTTGTCCTTTGATCGACGTGTGCTGGATGAGGCTCTGGCGGCGCAGTTT
TTGCAAGCTTTTAAGAGCTACATGTCAAGGCCCGAGCTGCTGTTGCTTTA
G back to topCoding sequence (CDS) from alignment at KK037250.1:468156..469806- >rna8915 ID=rna8915|Name=rna8915|organism=Nannochloropsis gaditana|type=CDS|length=3162bp|location=Sequence derived from alignment at KK037250.1:468156..469806- (Nannochloropsis gaditana)
GCTCAGGCTGCTGCGTTCGCGGCAGTGCCTCCCCCGCCCCCTGGTCTAGA
TCCGGCCCAAGTCGGAATCCCGACCATCCAGGCGGGCCCCGGAACCTTCT
CGGACACGAAAAACAGCAACATGCGGAAGGTGATCGCACGCCGGCTGGCA
GAAAGCAAGGCGACGGTGCCCCATGCCTATGAGACGGTGGACTGTGAGAT
CGACGCGGTGCTTTCGTTTCGGAAACAGATGCAACGAGACTTCGAGGTCA
ATGTCTCCGTGAACGATTTCATCATCCGCTCGGCGGCCTTGGCCCTCCGG
GACGTACCAGAAGCCAATGCGTTTTGGGATGGACCGAAAGGGACCGCAGT
CCTTAAAGAAGACGTAGATATCTCGGTGGCTGTAGCCACGCCCGCGGGGT
TGATAACCCCCATCATTAGCGGATCGGACCGGCGGCGGTTGAGTGAAATC
AGCGCGACCATGAAGGATTTGGCGGGGAGGGCGCGGCAAGGGAAGTTGAA
GCCTGAAGAGTTCCAGGGGGGATCATTCACAATCTCAAACCTTGGCATGT
TCGGCATCGATGAATTTTCGGCGGTGATCAACCCCCCACAAGCCGCCATC
ATGGCGGTCGGAAGAGGGGCAAAGCGAGTGCGAGCTCCTCCCTACCTACC
GGATCAACATGCAGGCAACTTGAAGCCTTATACCGCCACGGTAATGACTG
CCACCTTGTCCTTTGATCGACGTGTGCTGGATGAGGCTCTGGCGGCGCAG
TTTTTGCAAGCTTTTAAGAGCTACATGTCAAGGCCCGAGCTGCTGTTGCT
TTAGATGATGCGCCAGCGCGTCATCTCTTTCACTCGTCGGTTTGCGCTTA
AGCAGGCGGCTTCTTGCGGAACTACTCCTCATGCCAGCGTCAGTACAAGT
AGGAGGAGGCTTGCGCACATGGCGAGGCCACTTTTTTTTCTTAGTTGCAG
CGATGGGAGTAGGCCAATGCTTAACATGGGCTTTTACGCGGGTAGGAAGA
GCGCCTGCCTCATGAGCCGCAGAGGGTTTGCGGACCTGCCGGAAGTGAGC
ACAATCGTTATGCCCGCCCTCTCCCCCACCATGACGCATGGAACCATCAG
TGAGTGGACCAAAAAGCCAGGAGATGTATGCGAGGCAGGAGATGTGCTGT
GCGAGATCGAAACGGACAAGGCGGTGGTGGCCTTTGACGTCCAGGATGAA
TGCGTGTTGGCCAAGATTCTTGAAGAGGCCAAAGGCCGGGAGATTCAGGT
GGGCATGCCCGTGGCTCTTTCTGTGGAGGATAAAGCTGCCTATGAGGCAT
TTGTGGAGGCAGATAAGGCCGGAAAGATCGCAACGCCCAGTACGGAAGCA
TTACCTTCGCCCACGGCTTCCTCGACGTCTCCACCTGCTCCCTCCCTCCC
GGCTTCCCCTCCTCCTTCCCCCCCCACGCCCACCGCGCATCTCGGTGACT
TTGCCCTCTCGCCTGCGGCACGCCACCTGCTGCACAGCCGGCAACTGACC
CTGTCGGCGGAGGTGCATGGGACCGGGAAGGGGGGCAGGCTCACGAAGGG
CGATGTGATACAGGCTATCGCCAACGGCCAAGCTCAGGCTGCTGCGTTCG
CGGCAGTGCCTCCCCCGCCCCCTGGTCTAGATCCGGCCCAAGTCGGAATC
CCGACCATCCAGGCGGGCCCCGGAACCTTCTCGGACACGAAAAACAGCAA
CATGCGGAAGGTGATCGCACGCCGGCTGGCAGAAAGCAAGGCGACGGTGC
CCCATGCCTATGAGACGGTGGACTGTGAGATCGACGCGGTGCTTTCGTTT
CGGAAACAGATGCAACGAGACTTCGAGGTCAATGTCTCCGTGAACGATTT
CATCATCCGCTCGGCGGCCTTGGCCCTCCGGGACGTACCAGAAGCCAATG
CGTTTTGGGATGGACCGAAAGGGACCGCAGTCCTTAAAGAAGACGTAGAT
ATCTCGGTGGCTGTAGCCACGCCCGCGGGGTTGATAACCCCCATCATTAG
CGGATCGGACCGGCGGCGGTTGAGTGAAATCAGCGCGACCATGAAGGATT
TGGCGGGGAGGGCGCGGCAAGGGAAGTTGAAGCCTGAAGAGTTCCAGGGG
GGATCATTCACAATCTCAAACCTTGGCATGTTCGGCATCGATGAATTTTC
GGCGGTGATCAACCCCCCACAAGCCGCCATCATGGCGGTCGGAAGAGGGG
CAAAGCGAGTGCGAGCTCCTCCCTACCTACCGGATCAACATGCAGGCAAC
TTGAAGCCTTATACCGCCACGGTAATGACTGCCACCTTGTCCTTTGATCG
ACGTGTGCTGGATGAGGCTCTGGCGGCGCAGTTTTTGCAAGCTTTTAAGA
GCTACATGTCAAGGCCCGAGCTGCTGTTGCTTTAGATGATGCGCCAGCGC
GTCATCTCTTTCACTCGTCGGTTTGCGCTTAAGCAGGCGGCTTCTTGCGG
AACTACTCCTCATGCCAGCGTCAGTACAAGTAGGAGGAGGCTTGCGCACA
TGGCGAGGCCACTTTTTTTTCTTAGTTGCAGCGATGGGAGTAGGCCAATG
CTTAACATGGGCTTTTACGCGGGTAGGAAGAGCGCCTGCCTCATGAGCCG
CAGAGGGTTTGCGGACCTGCCGGAAGTGAGCACAATCGTTATGCCCGCCC
TCTCCCCCACCATGACGCATGGAACCATCAGTGAGTGGACCAAAAAGCCA
GGAGATGTATGCGAGGCAGGAGATGTGCTGTGCGAGATCGAAACGGACAA
GGCGGTGGTGGCCTTTGACGTCCAGGATGAATGCGTGTTGGCCAAGATTC
TTGAAGAGGCCAAAGGCCGGGAGATTCAGGTGGGCATGCCCGTGGCTCTT
TCTGTGGAGGATAAAGCTGCCTATGAGGCATTTGTGGAGGCAGATAAGGC
CGGAAAGATCGCAACGCCCAGTACGGAAGCATTACCTTCGCCCACGGCTT
CCTCGACGTCTCCACCTGCTCCCTCCCTCCCGGCTTCCCCTCCTCCTTCC
CCCCCCACGCCCACCGCGCATCTCGGTGACTTTGCCCTCTCGCCTGCGGC
ACGCCACCTGCTGCACAGCCGGCAACTGACCCTGTCGGCGGAGGTGCATG
GGACCGGGAAGGGGGGCAGGCTCACGAAGGGCGATGTGATACAGGCTATC
GCCAACGGCCAA back to top
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