rna89, rna89 (mRNA) Nannochloropsis gaditana

Overview
Namerna89
Unique Namerna89
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2919
Alignment locationCM002455.1:243518..243853 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100033g14.8418.mrna
Orig protein idgnl|cribi|Naga_100033g14.8418
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:243518..243853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100033g14gene87Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna89rna89-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30579.1cds89Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna89 ID=rna89|Name=rna89|organism=Nannochloropsis gaditana|type=mRNA|length=2919bp
ATGAGACAGTGTTCGCGATTGGGCGTTGTCGGCAGAACCAAATGTAGAAA
GCGGCTGTTGCCCTCGGCATGGAAAGGGAGAGCAAGACCATCATTACCAT
CCGTGCCACATCCATCGCTGGGGTTTCTACGACCTTTTCACGCCAATCCT
GTGCATCTCTTGGTGGCCGCGCCGATCGCTTCGAAAGTTTTGACCACAAG
TTATGGTTCAGACGCGGAGGATGATCGGGCAAAGAAAGACTTTCTGGCAT
TTATAGAGCCAGAGGACCAAGACGTTGCAATTATGGTAATGCGTGATGCG
TATAACGCGGCGGCCAAAGGGCAAGAGACGGTAAATAAGGACGCGAAAAC
ACCCGGAGAGGACGCCCTTGAACCATTCATCTTGCGTTCGCTGCCTTCGT
CTTCCTCTCTGGAATTTTTTTCGTCTTCACGTTCTTCAGCTCTCGCCACT
TTCTGTAACGCCCTGCTGTGCGGGTTAGCGCGGGCTAACGACCCCGCCCT
TCTGGACAAAGCGTTTGCGTACCTGGGAAAGATGCGAACCCGTCTCCCTC
AAGAATTTGCCGAAAGGGCTTTGCCGTCAAATGCGGCCCGGAGTCACATG
ATACGGACGTGCGCCATATTAGTTCGAGGCGCAGGGCTTTTCCGACACTC
CGACACGGGTGAACGACTCGCTGCACCCTCTCCTTCGGAAGGTCCGTCTT
TCAATTCTCCCGTCAAAGCAGCATCCGGAGGCAGTAAATATATCAGGTTG
AGCGAAATGCTCTTTGAAGAATACTTGCACTCCTCCATGGAAGCCGTACG
TCGCGAGCCCAACAACAAGGCCCTTTTTTCCGAATATCTCTACCATACTC
CCCGACTACTAAGCTCCATGATATACATCTATTGTCAAGCCCGGGAAAAT
CGGAAGGCTGTGGCTCTCTTCAACCGGTTGCGGGACCAGACGTTCCCATG
TTCGATCGTCCCGGATGGCTTGGCCGTCGCTGGTGTCATCCGGGCGCAAG
CTGTCTCCCAGGGGCCGCTCGAGGCCTGGGAGCACCTGCAAGAGTTAAGG
AGAGGAAACCCGCCCATTGACGTGGCTACGTTCTTTGGGTTGTACAAAAC
CTTTGCCTTCTGCATCCTCAGCCATGCGCCCTCGGGGGGACGGCCCGGGG
ACGCGCTTCACGCATTGGCCCATCGGGTCGTGGAGGACATGCGGGCCCAT
GGGATCAGGCCGTCGGCGACGCAGTGGCACATATTCATGAAGGTCGAGAC
GCTGTTCGCGGACTGGGAGCGTATACAGCAGTACATGGCGTGGATGAAGG
AGGACGGCTGGTCGTACGGAAGTTACGAGTATGGCATGTTGATCGAGGCG
TTGGGAGTGCGGAAGCAACTGGGATTGATTGCGCAGGTCCGGGCCAAGAT
GGAGAAAGAAGGGATACCCGTCACGTACGTGGTGTACCTGAGCATCATTC
AAGCATATCGGAGAGCCTACGACGTGCGGAGCGCGGAAGCTGCTTTCAGG
GATTGGCAGAGGGAGCCCTGGCGGGATGAGGAGGAAGTCAAGCATCGCGC
CGAGCCCGTGGAGATCGTCACCACGATGATGAAAATATATGCAAAGGGAG
GCCTGCCCGAGAAAGCGTGGGCGCTGTTCGTGCAGTACCGGGAGGGAGAC
GCCATCGGCGGCGAGGAGCCCGGGGAGGGGAAAAAAAAGCGGCGCCCGGA
CCACGTGATGTATTCGGTGGCCGTGCGTGTGGCGTCACTGTTGGGGGGGA
TTCCGATGGTGGAAAAGGTGTACGAGGAGTACCAACAAGATAAAGCTCGC
GGTTTCCATGGGGGGGGTGGGGAGCTGGGCCAGGGCGGGGCGGGGAGCCT
GGGGAGGGAGGGAGGCCTAGGGGTAAAGAAGGAGCAGTCTTCAGGCCAAC
GAGCAGGGGCGGACCGAGGGCTGCAAAGCCGACGGAAGCTCAAAGACAAC
ATGTCGCTCAGCATGCTCGCCGCCTACGTGGACGCCAAAGAATGGGGGAG
GGCCTATGAGTTCTTTGACACGCTACAGGCCGCGGATGAAAAGGAGGGCA
CCTTTGCACCCATACGCGCGTACAATGTCATGATTTATGGTTTGAAACGG
GCAAACCGTCACGAGGAAGCACGGACGCTGGCCGAACAAGCCAAGGCGAA
AGGTATCGCCTTCGATAGGGCCACGCAGAAGATATTGGCGAGCACGGCGG
GGGCGGAGGACTTGTGGGCGCCCCCTCCACATGTTTACGTGCTGGGGGGA
GAGAAGTACAGGCAGGAAAGGAAAATAAAGAGTGTACAGGGAAACATCGA
AGGACGGCGAGACCTGCCGGTGGGCGCAGTAGTGTTGGACCTGCACGGGC
TGAGCGTCGATGAAGCCCGGACCTTGCTAGCTAGGGAGTTCGAGGCCATG
CGGGAGAAATTCGATGCGGAAATGAAAGAAGGCGGGGAAGAAGCGGGAGA
AAATGAGAAGTGTGCACGTGTGAATGAAGGAAATCCTGAAGAAGGGAGGG
ATTACGCGAAAGGGTCCGAGGATACTGTGCGCGTCCACGACGCTCATCGG
GACGGTTTGCAAGACCTACTTCTCATCACCGGGTTTCGGCGACGGATCGG
TCCCGGGCAGGGGGCGGTCCTCCTGGCAAATGAAGATATGCCTATCTACC
AAAAAGGGGAAGGAGACAACGTGAACGCTTTACAAGAAACTGCCCGGGAC
TTTCTGGGTGACCGCGGAATCTACTGGTCTTCCGTGCCCTCGAATCCGGG
CCGTCTGCTTGTACAAAGCGACTCCCTTCGACAATATTTCGAAAGGCAAC
GTAGGGAGGAATCCAAGGTGAAGTTCTTGCGCTTGACTTTGTTGAGGTAC
ATTCCTGTGACATCACTGTTGGCATTGCTATTTGTAGTGCCCAAGGACAT
AGCAGGGGTACCATTGTAA
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protein sequence of rna89

>rna89-protein ID=rna89-protein|Name=rna89|organism=Nannochloropsis gaditana|type=polypeptide|length=88bp
MMRHPLQTISLIRGHRSEPCISLFLKSNNIASRPSNRFVSLTKLCVCELQ
DNDFERKTWGNTGTTFVCLLFPVSFHGELNPQDLPWHV
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mRNA from alignment at CM002455.1:243518..243853-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna89 ID=rna89|Name=rna89|organism=Nannochloropsis gaditana|type=mRNA|length=336bp|location=Sequence derived from alignment at CM002455.1:243518..243853- (Nannochloropsis gaditana)
ATGATGCGCCACCCTCTTCAAACGATTTCTTTAATACGCGGACGTTGACA
ATGATGTAGCTAAGCGATACGATCGTGTTCGTGTACGATAGTAGTAGTTT
AAGCCCATTAAGATCGGTCTGAGCCATGCATTTCTTTATTTTTGAAGTCA
AACAACATCGCAAGCCGTCCATCGAACAGATTCGTGAGTTTGACGAAACT
ATGCGTGTGTGAGTTGCAAGACAATGATTTCGAGAGAAAAACTTGGGGAA
ATACCGGGACAACTTTTGTATGCCTTCTATTCCCAGTATCTTTCCATGGC
GAGTTAAACCCGCAGGACCTTCCATGGCATGTTTAA
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Coding sequence (CDS) from alignment at CM002455.1:243518..243853-

>rna89 ID=rna89|Name=rna89|organism=Nannochloropsis gaditana|type=CDS|length=534bp|location=Sequence derived from alignment at CM002455.1:243518..243853- (Nannochloropsis gaditana)
ATCGGTCTGAGCCATGCATTTCTTTATTTTTGAAGTCAAACAACATCGCA
AGCCGTCCATCGAACAGATTCGTGAGTTTGACGAAACTATGCGTGTGTGA
GTTGCAAGACAATGATTTCGAGAGAAAAACTTGGGGAAATACCGGGACAA
CTTTTGTATGCCTTCTATTCCCAGTATCTTTCCATGGCGAGTTAAACCCG
CAGGACCTTCCATGGCATGTTTAAATGATGCGCCACCCTCTTCAAACGAT
TTCTTTAATACGCGGACATCGGTCTGAGCCATGCATTTCTTTATTTTTGA
AGTCAAACAACATCGCAAGCCGTCCATCGAACAGATTCGTGAGTTTGACG
AAACTATGCGTGTGTGAGTTGCAAGACAATGATTTCGAGAGAAAAACTTG
GGGAAATACCGGGACAACTTTTGTATGCCTTCTATTCCCAGTATCTTTCC
ATGGCGAGTTAAACCCGCAGGACCTTCCATGGCATGTTTAAATGATGCGC
CACCCTCTTCAAACGATTTCTTTAATACGCGGAC
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Synonyms
Publications