|
|
Properties
| Property Name | Value |
|---|
| Product | ribosomal protein l11 methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100051g36.8873.mrna |
| Orig protein id | gnl|cribi|Naga_100051g36.8873 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:380560..382500 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8881 ID=rna8881|Name=rna8881|organism=Nannochloropsis gaditana|type=mRNA|length=2569bp
GTAGCATGCGCCGTTGTTTGTCATGGTATCAAGATTAACAACAGACGGTC
GCCACTGAGTTGCTCTGCTAAATGCCATGGCCCTTGCATGCATCCAACGA
CGTACAGTAATTATTGTGTTCGCTTTTGGTACACGGGGTGACGTGCAACC
AGTTGCATTATTAGCAGAATCCTTGTCCAGTGTTTATGATGATGTATTTT
TCGTCTCTCATGGCCAGCTGGAAAAGACATTAAAAGAGCTCTGGGGAAGC
ACCGCGTGCATCAAATTTATCGCAAGCCCCAGTCCTCCACATGCTGCAGA
CGCAGGATTCGGTCCAGAAGTAGATATAGCAGCCATATTACGTCCAAGAA
ATCACTTACAGATCCTTTGCAGTATAACATTTTGAAAAAGGAAAGCTGGA
GCACGGAGGACAGTGAACGCTCAACGAGTCATACGCAAATAAAATGGGTA
GATATAGAGCATTACTTGTGGCCTATTTTTTTTGATTCTTGGAAGCCCTT
TCGGCGCATGCTCTTCGGAGTTGAGAACGACAAAATTGATGGCATAAATC
TGCCGTGGCTGGCCGGCCGCCCATCAATTCCGCTGCTGTATTTGTACAGC
GAGAGCATTCTCCCCCGACCGCACCATTTTCCACATGCCGTACACGTCGT
AGGCTTCATTTTTGAGGAGAAGAATGCCGGGTCTTTCAAGCCTCCACCTA
TTTTGACGGCTTTCCTCTCAGGGGCAACAGGGCGAGCAGTAGAAAAACGC
GAGTCTCCCTGCGTTCCTTCCCAGGAGACTACGGGGCGCCTCGTGCCGGA
CATCACCAAGAAAGTCGAAAATGCTTCAAGCCAAGTGGGTCAAAAAGAGT
TTTGTCCTGAAGTGGGTCCTGTCTATGTGAGCTTTGGGACCATGGTCTCG
CTCGGCGCCTTGGGTGACCTGGATCGCGCCGCCCGCGCTCTTATCCAGGC
TCTTCTATCGCCCTCTCTGTCATCCGAGGTACCCTCTACTTCTATCCCGA
TCCGGTGTGTGGTCGATGCTGCTCATTCCCCACGATGGGTGAAGGCCTTG
CAGCTGGCCGTGGCGACATGCCAAGTCAGGGAACGAGTCCTCATTCTCGA
AGAGTCAGTGCCTCATTCGTGGCTTCTACCGCAGTGCAGTGCAATCGTGC
ATCACGGGGGAAGCGGCACAACTGCCGCCGCCTTGCGAGCGGGTATTGCA
CAGGTTGTGGTACCGGGCATGATGGATCAGTTCCTCTGGGCGGAGCGAGT
GGCCTCGCTGGGCTTGGGGCCTTCCCCCCCGGGCATTGCGGAGGTGTTCC
CGGAGGGCCCGGCCGAGAACACCGGTGGGGCAACCCCTTGCCAAGTTCTC
TCGGTCGCAATAGCGCAAGCGATGCATCCTTTTGTCCGGCTACGGGCTGC
AGCAATGGGCCGTCGCCTCCGGGCCGAGCCCTCAGGATTGCAACGGTGTG
CGACACTCATTGCTCATTACCTTGAGGAGTGGCAAAGGCTTCCTCTCCCG
CCACCCGTTCGACCTCCCCTACCTTTCTCCTTGCCGTTGGGCTGCGAGCT
CGTTGATTTAGAGGTGCTTGACGACATGGGAAGCAGCGCTCACTGCGATG
TAGGGGGCCAGTGCGATGCTTCCCGTGCGACGTTCTCGGCCCTGACCGTG
GCCGTCTTGGAAGGGAGTGAATCGGAGGTGGCCTTCATTCACCAAGAGAT
TTTCCCCCCCGGTGTGCAGACGCATGGGTGGGGTTATCTTAGACACGGGG
TACATGTAAAGGCAGATGACATTGTTTTGGATGTGGGCGCCAATATCGGA
CTTTTTGCGTTGTATCTCGATCTTCACGTCATGGACCAGCCCGAGCGTGT
CTCCATTCTGGCAGTGGAACCCGGCCCCCGCACGTTCCAAGCCCTTCAAT
ACAATTTGGCAGCTTATGGGGTCAAGCAAATAGCGTGTCTGCAACAAGCT
GTTGGCGCCGAGGTAAATCGTGTCGAGGGGATGGGGGATGCGGCGGACGA
GGAGGCGAAACCCGAAGGAGGACACCACCTCCTACGCTTTTATCCACACG
CTCCAGGTAATAGCACTCTCTTGACTCAGGGACTGAGCCATCTGCAGGGT
AAGAGTGCCTTCAAAGGGGTCAATGCCAAGCTGCGTGCCCACTTGACAGA
AGGGGCAGAGGACTTTCCTGTGAGAGTCACGACTGTCTCGGCCCTGGTGC
GAGACTACGCCCTCCCTCGCGTCAATTTGCTCAAAATCGACGTTGAAGGG
CATGAGGAGGCTGTGCTTCACGGCATCGACGGGAAAACCTGGGATGTCAT
CGAGCAAGTCGCCATGGAGGTGCACGATGTGGATGGCCGCCTGGCCCGCA
TCGAGTGCCTTCTGCGCCGGCAGGGTTTCGGGTCGGTCGTCTCAGAGACA
CCTGTCTGGGCACAGGGTGGATGTGATGGGGAAACTCTGGACAACCGAAT
GGTATACGCACATCGAAACAGGCATCCCTCATGAAGCAAAAGACATCTGT
CAATAGAACTGAAGATCTTCTGACGGAAGCGAAGCGAATACGATAAAAAT
AAGCACGTCCGTATCGAAT back to topprotein sequence of rna8881 >rna8881-protein ID=rna8881-protein|Name=rna8881|organism=Nannochloropsis gaditana|type=polypeptide|length=484bp
MGSDKSTAKGNLDLSKQQQGYQDGRTWNMRTMRLSHAGCALLTMTCAHGF
TRPYFRTTRIDIRRARNEPQSAPLPLSCGCVHLSRSKRLQGHSFKEDEAS
ATIQANNEWTEPWTGAESNDLVRIIFDCYEKDRMLIDPWLLSELLLETGA
YSSQIEDAAKDTRDETPIFGEHGEPACSEKIWNRSLVMADYGLDVDVGSV
LSLIKEAFQLGASYPVRYRLERIVDRDWQKEVQESWKPLLLGDRLLVKFT
WHEEEDVKALLASRTAVEDVKVLALEGGAAFGSGEHPTTVMCCAWLQSHL
AAESAKAGTDGGEGLSVCDYGAGSGILAMAALLFGAGTAFGVEIDVFAIQ
SAYRNAEMNGLQMAFVQPVETRTEGTEGGIACVTYQLVQPDGSVDEEDEE
VQIAPTDVMLANILKRPLIELSKQISSLTKLEGGKVALAGLLEEQAEDVM
AAYRPYFPDIAPADQEGEWVLLVGTRNDVPVVLP back to topmRNA from alignment at KK037250.1:380560..382500- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8881 ID=rna8881|Name=rna8881|organism=Nannochloropsis gaditana|type=mRNA|length=1941bp|location=Sequence derived from alignment at KK037250.1:380560..382500- (Nannochloropsis gaditana)
ATGGGATCTGACAAGGTCGCTGTCCTCGCTGGCTTTCACCACCAGCCAGT
CTGCAACATAATTACTTGAACCTGCCCATATACCATCGTACCCATCGACA
CTCACCCAACCGTGCCCAATTTTTGCCAATCGTTGCCACGGCACATACAC
AGAGTACTGCAAAGGGAAATTTGGACCTGAGCAAGCAACAACAAGGATAC
CAGGACGGGAGGACTTGGAATATGCGTACAATGCGACTCAGCCATGCTGG
CTGTGCGCTTTTAACGATGACATGTGCGCATGGCTTTACGCGTCCATATT
TCCGCACGACAAGGATCGATATTAGACGGGCGCGAAATGAGCCCCAGTCA
GCGCCCTTGCCTTTATCCTGCGGCTGTGTCCATCTCTCGCGCAGTAAGCG
CCTTCAAGGACATAGCTTTAAGGAAGACGAAGCCTCAGCAACCATTCAGG
CCAACAACGAATGGACAGAGCCGTGGACGGGTGCCGAAAGCAATGACCTG
GTCCGCATCATTTTCGACTGCTACGAAAAAGACAGGATGCTCATCGACCC
CTGGCTCCTCTCCGAGCTTTTACTCGAGACCGGCGCGTACAGCAGTCAGA
TTGAGGACGCCGCCAAGGACACGAGGGACGAGACGCCTATCTTTGGGGAG
CACGGGGAGCCTGCCTGCAGCGAGAAAATCTGGAACCGCAGCCTGGTCAT
GGCGGACTATGGCCTTGATGTGGACGTAGGGTCCGTGCTGGTACGTGACG
CGAGGCATGGTGGGGGGCAGAGGACACGAGGCCAATCGTGATCTTGGACC
GCTGCATGTGTTGTAAATCGGGACGCGGAGAGACATTCGGTTTGGACCCC
TCTTGGCGTCGTCGTCGGGCTTGTTGCGCCTTTGACTCGGGTAGTCCCAC
TGGCGATGATTGATATGATGAGGATGGTTGCCAAGCACACTCATAAAGTC
TTTTCATCCTGATCCCACGAATAAAAAGTCGTTGATCAAGGAGGCGTTTC
AACTCGGTGCATCCTACCCTGTGCGGTACCGCCTGGAGAGAATTGTGGAC
CGGGACTGGCAGAAGGAGGTGCAAGAGAGTTGGAAGCCGCTCTTGCTGGG
AGACCGGCTGCTGGTCAAGTTCACGTGGCACGAGGAGGAGGACGTGAAGG
CCCTCTTGGCCTCCCGCACGGCTGTGGAGGACGTGAAAGTGCTGGCATTG
GAAGGTGGCGCGGCCTTTGGGAGTGGCGAACACCCAACGACGGTCATGTG
CTGCGCCTGGTTGCAGAGTCATCTGGCAGCAGAGTCCGCCAAAGCGGGAA
CCGATGGAGGGGAAGGACTCAGTGTGTGTGACTATGGGGCAGGTAGTGGG
ATCTTGGCTATGGCAGCGTTGCTGTTCGGGGCGGGCACGGCTTTTGGCGT
GGAGATCGATGTGTTTGCGATACAGAGCGCCTATCGTAACGCGGAGATGA
ACGGGCTGCAGATGGCATTTGTGCAGCCAGTGGAGACTAGAACTGAGGGC
ACCGAAGGTGGAATTGCATGCGTGACGTATCAACTGGTACAGCCGGATGG
CAGCGTGGACGAGGAGGACGAAGAGGTACAGATTGCACCTACAGACGTGA
TGCTGGCTAACATCTTGAAGCGACCGCTTATAGAGCTCTCGAAGCAAATT
TCGAGCCTGACAAAGCTGGAGGGTGGTAAGGTGGCGCTAGCGGGATTATT
GGAAGAGCAAGCCGAGGATGTCATGGCGGCCTACCGGCCGTACTTCCCAG
ATATCGCGCCGGCAGATCAAGAGGGGGAGTGGGTTTTGCTGGTGGGGACA
AGGAATGACGTGCCCGTCGTACTCCCGTGACGAAAACTGGAGGAGACATC
TCTTCTGAGAAATGCAAAGTACACAGCGAACATTAAATTAGAAAAGGTCA
AGAAAATTTGCAGAAATGAAGCATTCGATACGGACGTGCTT back to topCoding sequence (CDS) from alignment at KK037250.1:380560..382500- >rna8881 ID=rna8881|Name=rna8881|organism=Nannochloropsis gaditana|type=CDS|length=4365bp|location=Sequence derived from alignment at KK037250.1:380560..382500- (Nannochloropsis gaditana)
TCGTTGATCAAGGAGGCGTTTCAACTCGGTGCATCCTACCCTGTGCGGTA
CCGCCTGGAGAGAATTGTGGACCGGGACTGGCAGAAGGAGGTGCAAGAGA
GTTGGAAGCCGCTCTTGCTGGGAGACCGGCTGCTGGTCAAGTTCACGTGG
CACGAGGAGGAGGACGTGAAGGCCCTCTTGGCCTCCCGCACGGCTGTGGA
GGACGTGAAAGTGCTGGCATTGGAAGGTGGCGCGGCCTTTGGGAGTGGCG
AACACCCAACGACGGTCATGTGCTGCGCCTGGTTGCAGAGTCATCTGGCA
GCAGAGTCCGCCAAAGCGGGAACCGATGGAGGGGAAGGACTCAGTGTGTG
TGACTATGGGGCAGGTAGTGGGATCTTGGCTATGGCAGCGTTGCTGTTCG
GGGCGGGCACGGCTTTTGGCGTGGAGATCGATGTGTTTGCGATACAGAGC
GCCTATCGTAACGCGGAGATGAACGGGCTGCAGATGGCATTTGTGCAGCC
AGTGGAGACTAGAACTGAGGGCACCGAAGGTGGAATTGCATGCGTGACGT
ATCAACTGGTACAGCCGGATGGCAGCGTGGACGAGGAGGACGAAGAGGTA
CAGATTGCACCTACAGACGTGATGCTGGCTAACATCTTGAAGCGACCGCT
TATAGAGCTCTCGAAGCAAATTTCGAGCCTGACAAAGCTGGAGGGTGGTA
AGGTGGCGCTAGCGGGATTATTGGAAGAGCAAGCCGAGGATGTCATGGCG
GCCTACCGGCCGTACTTCCCAGATATCGCGCCGGCAGATCAAGAGGGGGA
GTGGGTTTTGCTGGTGGGGACAAGGAATGACGTGCCCGTCGTACTCCCGT
GAAGTACTGCAAAGGGAAATTTGGACCTGAGCAAGCAACAACAAGGATAC
CAGGACGGGAGGACTTGGAATATGCGTACAATGCGACTCAGCCATGCTGG
CTGTGCGCTTTTAACGATGACATGTGCGCATGGCTTTACGCGTCCATATT
TCCGCACGACAAGGATCGATATTAGACGGGCGCGAAATGAGCCCCAGTCA
GCGCCCTTGCCTTTATCCTGCGGCTGTGTCCATCTCTCGCGCAGTAAGCG
CCTTCAAGGACATAGCTTTAAGGAAGACGAAGCCTCAGCAACCATTCAGG
CCAACAACGAATGGACAGAGCCGTGGACGGGTGCCGAAAGCAATGACCTG
GTCCGCATCATTTTCGACTGCTACGAAAAAGACAGGATGCTCATCGACCC
CTGGCTCCTCTCCGAGCTTTTACTCGAGACCGGCGCGTACAGCAGTCAGA
TTGAGGACGCCGCCAAGGACACGAGGGACGAGACGCCTATCTTTGGGGAG
CACGGGGAGCCTGCCTGCAGCGAGAAAATCTGGAACCGCAGCCTGGTCAT
GGCGGACTATGGCCTTGATGTGGACGTAGGGTCCGTGCTGATGGGATCTG
ACAAGTCGTTGATCAAGGAGGCGTTTCAACTCGGTGCATCCTACCCTGTG
CGGTACCGCCTGGAGAGAATTGTGGACCGGGACTGGCAGAAGGAGGTGCA
AGAGAGTTGGAAGCCGCTCTTGCTGGGAGACCGGCTGCTGGTCAAGTTCA
CGTGGCACGAGGAGGAGGACGTGAAGGCCCTCTTGGCCTCCCGCACGGCT
GTGGAGGACGTGAAAGTGCTGGCATTGGAAGGTGGCGCGGCCTTTGGGAG
TGGCGAACACCCAACGACGGTCATGTGCTGCGCCTGGTTGCAGAGTCATC
TGGCAGCAGAGTCCGCCAAAGCGGGAACCGATGGAGGGGAAGGACTCAGT
GTGTGTGACTATGGGGCAGGTAGTGGGATCTTGGCTATGGCAGCGTTGCT
GTTCGGGGCGGGCACGGCTTTTGGCGTGGAGATCGATGTGTTTGCGATAC
AGAGCGCCTATCGTAACGCGGAGATGAACGGGCTGCAGATGGCATTTGTG
CAGCCAGTGGAGACTAGAACTGAGGGCACCGAAGGTGGAATTGCATGCGT
GACGTATCAACTGGTACAGCCGGATGGCAGCGTGGACGAGGAGGACGAAG
AGGTACAGATTGCACCTACAGACGTGATGCTGGCTAACATCTTGAAGCGA
CCGCTTATAGAGCTCTCGAAGCAAATTTCGAGCCTGACAAAGCTGGAGGG
TGGTAAGGTGGCGCTAGCGGGATTATTGGAAGAGCAAGCCGAGGATGTCA
TGGCGGCCTACCGGCCGTACTTCCCAGATATCGCGCCGGCAGATCAAGAG
GGGGAGTGGGTTTTGCTGGTGGGGACAAGGAATGACGTGCCCGTCGTACT
CCCGTGAAGTACTGCAAAGGGAAATTTGGACCTGAGCAAGCAACAACAAG
GATACCAGGACGGGAGGACTTGGAATATGCGTACAATGCGACTCAGCCAT
GCTGGCTGTGCGCTTTTAACGATGACATGTGCGCATGGCTTTACGCGTCC
ATATTTCCGCACGACAAGGATCGATATTAGACGGGCGCGAAATGAGCCCC
AGTCAGCGCCCTTGCCTTTATCCTGCGGCTGTGTCCATCTCTCGCGCAGT
AAGCGCCTTCAAGGACATAGCTTTAAGGAAGACGAAGCCTCAGCAACCAT
TCAGGCCAACAACGAATGGACAGAGCCGTGGACGGGTGCCGAAAGCAATG
ACCTGGTCCGCATCATTTTCGACTGCTACGAAAAAGACAGGATGCTCATC
GACCCCTGGCTCCTCTCCGAGCTTTTACTCGAGACCGGCGCGTACAGCAG
TCAGATTGAGGACGCCGCCAAGGACACGAGGGACGAGACGCCTATCTTTG
GGGAGCACGGGGAGCCTGCCTGCAGCGAGAAAATCTGGAACCGCAGCCTG
GTCATGGCGGACTATGGCCTTGATGTGGACGTAGGGTCCGTGCTGATGGG
ATCTGACAAGTCGTTGATCAAGGAGGCGTTTCAACTCGGTGCATCCTACC
CTGTGCGGTACCGCCTGGAGAGAATTGTGGACCGGGACTGGCAGAAGGAG
GTGCAAGAGAGTTGGAAGCCGCTCTTGCTGGGAGACCGGCTGCTGGTCAA
GTTCACGTGGCACGAGGAGGAGGACGTGAAGGCCCTCTTGGCCTCCCGCA
CGGCTGTGGAGGACGTGAAAGTGCTGGCATTGGAAGGTGGCGCGGCCTTT
GGGAGTGGCGAACACCCAACGACGGTCATGTGCTGCGCCTGGTTGCAGAG
TCATCTGGCAGCAGAGTCCGCCAAAGCGGGAACCGATGGAGGGGAAGGAC
TCAGTGTGTGTGACTATGGGGCAGGTAGTGGGATCTTGGCTATGGCAGCG
TTGCTGTTCGGGGCGGGCACGGCTTTTGGCGTGGAGATCGATGTGTTTGC
GATACAGAGCGCCTATCGTAACGCGGAGATGAACGGGCTGCAGATGGCAT
TTGTGCAGCCAGTGGAGACTAGAACTGAGGGCACCGAAGGTGGAATTGCA
TGCGTGACGTATCAACTGGTACAGCCGGATGGCAGCGTGGACGAGGAGGA
CGAAGAGGTACAGATTGCACCTACAGACGTGATGCTGGCTAACATCTTGA
AGCGACCGCTTATAGAGCTCTCGAAGCAAATTTCGAGCCTGACAAAGCTG
GAGGGTGGTAAGGTGGCGCTAGCGGGATTATTGGAAGAGCAAGCCGAGGA
TGTCATGGCGGCCTACCGGCCGTACTTCCCAGATATCGCGCCGGCAGATC
AAGAGGGGGAGTGGGTTTTGCTGGTGGGGACAAGGAATGACGTGCCCGTC
GTACTCCCGTGAAGTACTGCAAAGGGAAATTTGGACCTGAGCAAGCAACA
ACAAGGATACCAGGACGGGAGGACTTGGAATATGCGTACAATGCGACTCA
GCCATGCTGGCTGTGCGCTTTTAACGATGACATGTGCGCATGGCTTTACG
CGTCCATATTTCCGCACGACAAGGATCGATATTAGACGGGCGCGAAATGA
GCCCCAGTCAGCGCCCTTGCCTTTATCCTGCGGCTGTGTCCATCTCTCGC
GCAGTAAGCGCCTTCAAGGACATAGCTTTAAGGAAGACGAAGCCTCAGCA
ACCATTCAGGCCAACAACGAATGGACAGAGCCGTGGACGGGTGCCGAAAG
CAATGACCTGGTCCGCATCATTTTCGACTGCTACGAAAAAGACAGGATGC
TCATCGACCCCTGGCTCCTCTCCGAGCTTTTACTCGAGACCGGCGCGTAC
AGCAGTCAGATTGAGGACGCCGCCAAGGACACGAGGGACGAGACGCCTAT
CTTTGGGGAGCACGGGGAGCCTGCCTGCAGCGAGAAAATCTGGAACCGCA
GCCTGGTCATGGCGGACTATGGCCTTGATGTGGACGTAGGGTCCGTGCTG
ATGGGATCTGACAAG back to top
|