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Properties
| Property Name | Value |
|---|
| Product | cytochrome c1 heme protein |
| Orig transcript id | gnl|cribi|Naga_100051g28.8888.mrna |
| Orig protein id | gnl|cribi|Naga_100051g28.8888 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:358915..360751 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8872 ID=rna8872|Name=rna8872|organism=Nannochloropsis gaditana|type=mRNA|length=3412bp
AATCCATGCGCCTGTCGACCTTGCGTTGCCCTTCAACTGCCTCTCGCGCA
GCGACGCTTCGTCACATGCAAATTCCGTTGGGAGCTCAGTTGAAAGTAAA
ATACGCAACGTGTCTCTATATATTTAAGAACTAACATGAGCAAGAAATGA
ATCTTTTATTCTGATTAGAATGTATTGGGTACAGACGTGTGCCTTTCGAC
GTGCCCCACTGCTAATTGTCAAAACCTTTCTTTCTTTTTAGGTTCGTCAG
TGTCTCCTGAGTCGTACTGCGACAGCGCCAGGGTCCAGCTGTAAAAGCGT
CTGAACCATCTGCAGGCGCCTGTATCCTGTGGGACCGTAATACACACTTG
CTGTAATCGATATCTCTCTTCGCAAGATACCTGTGTTCAGGGGGCAGACG
GTCGTGCCACCACAATCTCTTCGTACGGCGTTGAACCTTTGTCGTCCTCT
TCGCTTGCCTGTTTGAGAGCGTCGAACTTGAACTAAAACTTTGCAGAAGT
CCTTTCGTATAAATGCTTGCTCTTGCATTGCAAGCTGGTTCATTGGCCAC
GGGTGCTCCCACCCCGGGAAGGTCCTTGAGTAAACAAGGAAGTATGCCTA
TTGACCTCTCCACCACGTTGCCGCGACGAAACTCCGAGGACGAGGCGTCT
TGGGTAGAGAATACGAGCCCGAGTAGTGATGGAAGTGAGTCCGAAACAGG
GAGCCCATCCATGGGCATCGTTGACAATAGACCTGGTAGCACCAGCGACA
CCTTTGCCACGCATGCCACCAAGAAAGGGAGCGGCCAGGCCTCGCACGTG
GCGCTGGACTTGCGAGTCCCTCCTGCGGTAAAGAAACTCCGGCAAACAGG
ACGGGCGGAACACTCACAAAACTTGGAATTAGCATGGGATTTCTCCTTAT
CTGTGAAAGCAACCAAGCGGGAAGCAAAACTCTCAGGATCCTACAGCAAA
GAAATCTTGAGCAACGTAGCGGGCTCGGTCAAGTCCGGGCAAATGATGGC
AGTCATGGGCTCTTCCGGGGCTGGCAAATCCACCTTTCTGGACTGCGTCT
CCCTCCGAAATCAACAATTCTCCGGGAACGTGTACATCAACGGAAAGCCC
GCGGACGAGAAGTACTATTTCATGACCGGCTTTGTCTATCAGGAGGACTT
GTTCATCCCCACCATGACGGTGCGGGAACACCTCACTTTCCATGCCATGG
TGCGCATGAACTCAGATATTCCAGTCGAGAAGCGTTTGGAGCGTGTGGAG
GACGTGTTGATGGAGGTGGCCATGTCGCACTGCCCCGAGACCATCATCGG
CGGGCCCGGCACGGGTTACAGAGGCATCTCGGGTGGCGAGAAGAAGCGGC
TCGCCTTTGGTACGGAGTTGCTCAACAACCCCTCTATCGTCTTCGCGGAC
GAGCCGACCTCCGGGCTGGACTCCTTCATGACCCGAGGTGTCTGCATGAC
CATGCGTGAGCTCGCCGACGACGGAAAGATCATCATGTGCGTGATCCACC
AGCCGTCCTCGCAGACCTTCGACCTTTTCACCCATCTCCTCCTCCTCGCG
AAGGGCCGCATCGTCTACAACGGTCCCATGGCCACCCTACAATCCTACTT
CTCCTCCTTGGGGGTGATCTGTCCCCACTTCCACAACCCCGCCGACTTCT
TCATCAACCAGATCTCCATCGTGCCCACGGAACAGGAGGCCTCCATGGCC
CGCCTCCAGTCGCTCTGGGATGCCTACGAGAACTCCAACCTGGCTGCAGG
GAACATGGCCTGGAAGGCAGAGATGCCGGCGGAGATACTCAATCTGAAGC
ACAAGGCCGTGAGCATGAAGCACTTTCACGCCTCGACATGGACGCAGTTT
TACTACACGATGAAGAGGAACATCCAGAACGAATTCAGACGAGCCACGGA
CGTCAAAGCCAAGTTCATGAACTCCTTGGTCATGGGCATGATCCTCGGCA
CCATCTATTTCGGGCAGACCGACACCCAGGAGTCGGCTAAGAACATCATG
GGGCTCTTTTTCCTCATCATCATGTTCCAGACCATGGTCTCCATGTTTGG
GGTGCTGCAGGCGTTTCCCTCGGAATGTAAAGTCTTTATCCGCGAGAATC
TCTCGGGAGCGAATCGAGTCAGCTCTTACTTCCTGGCACGAACCCTCTCC
GAGCTCCCCAGCACCATAATTTACCCGTCCATTTTCGCGGCGATCGTCTA
CGGTATGGCCGACCTGCAGCCTACGGCAGGTCGCTTCTATTTTTACATTT
TCACCATCATTCTTGTCGCGAACTGCGCCACTTCGGTCGGCTACATGATC
TCCTCCATGACCTCCCACGAGGCCGTCGCCTACGCCCTGGCCCCTCTCTT
CCTCATGCCCATGGCCCTCTTCGCCGGCCTCCTCCTCGACTTGAACACGA
TCCCGGTCTGGCTCCGCTGGCTGGACTTCTTCTCCATCATCAAGTACGGC
TACCAGCTTCTCATTATCAACCAGTACACCGACCGGGAGCTCTCGTGCGT
GGGGTCCTTGTTCTGCCGGTGGAAGACGGGGACCGCGGTCATGAATTACG
TGGGCACATCCCCGCAAAAGGTGGGAGAGACGATGGGGATCTTGGTCGCC
TTGATTATCATCTTCCGGCTCCTGGCCTTCTTTTTCCTGACCAGGAAGAG
CAACCGGGCGCATTAGGCGGGGCGAGGCAAGTTTGAAGAGGAGAGAGGTC
ATGAGAGCTGTACAATAAAAAGCGTGTGTCTGAGTGGCAGACAAGGCGAG
CATAATTGGATAGAGCGATGGAAAAAATGAAGGTGATGGCAGGTGAAGAA
CCGCCGTCGTATATTCTTGTCACTGAACGGACGGAACAAGAGGTATGAGC
GTGGATATGGGCGCAAAGGCGGGCTTTCCAAGAGAAAAATTTCATAATTC
GAAGATGACAGTTGGACAGGCGGAAGTTGAAGTGGACAGAGTGCGAAAAG
GACCGCCAAAGAGCAGGAAAGTGCGCAAGGCAGGTGCGGCGAAGAGGTGT
TTGAGGGGTGGGACTCGGCGCGAGAACAAGAAGAGACATAAGAGTGAGCT
ATGGAGCCGTCGCGGGGGGAGGGGGAAAAAGGCTCTGTCCTTGTTCTGAG
GGCACAAAGCCTCCCGCTCCAGCTGGGGCCAATGGCGACGTATTGACTTT
TGGGAGAGGCTCTTGCAGCTCTCAGGGGCGGGAGGACGGACAAAATATTG
GAGAAGCTATAGGGTACGGCGCTTGGCACACGTGAGGCGGTGACAGCGAC
CTATGTGCAGTGCATGCGTGGCATCCATTAGTCATAGTTATGGATGGGAA
TGAGCGCATGAAGAACGGAGGGCATGGAGCAGAGCAAGGCCGCACGGAGG
CGTTAAGGGGCCCATCGGAGTGAAAGGAAAAGAAAGAAATTCCTCGAGTC
ACTCTTCTCTCT back to topprotein sequence of rna8872 >rna8872-protein ID=rna8872-protein|Name=rna8872|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
MLTCASILCMHSLWLLTSRVRMFSRAAAAFKRVRFIPPSAQDGKGKLMGA
LVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREV
CASCHALEHTYFRNLVGVTHTEEEVKKIAESYDVVDGPNAEGEMFERPGK
LSDKIPGPYANKEAARAANNGAYPPDLSLITKARPGGVDYIFALLTGYID
PPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDV
ATFLAWAAEPEHDYRKKAGVQWIGALLVALALTGFYKRFRWSPLKTAKFH
YVA back to topmRNA from alignment at KK037250.1:358915..360751- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8872 ID=rna8872|Name=rna8872|organism=Nannochloropsis gaditana|type=mRNA|length=1837bp|location=Sequence derived from alignment at KK037250.1:358915..360751- (Nannochloropsis gaditana)
TCATGCCCTTGGACACCCACTCTGCCGCCGCGCCCACCTCCATTTTCCTC
TATTCTTTCCCTTGCGCCCTGCGACGAGGATTTGTCGATGTTGTGGCGCA
GGGGATGCAGACTGGTGATCCTGAAATGGTGGAGTGTTTCGTCAGGGCGC
CGTCTCTGACGCAGACGCTCCTTCTCGAGGGCGGGGGCCCTCAGGCGACA
ACGCCCGTGTCGGTTTGGTGATAGCATCTCTCGAGAAATGCTCACATGCG
CTTCAATACTTTGCATGCACAGCCTTTGGCTACTTACTTCGCGAGTGAGG
ATGTTTTCTCGAGCGGCTGCGGCCTTCAAGCGGGTGAGGTTCATCCCACC
TAGTGCCCAGGTAATGCCTAGGGGAGGAGACAAGGGGAGGGAGAAAGGTA
TTTGCTGGGACGACGCAATCGCAACGGGGAGCCGATTGCTTTGTTGCTCT
TACGCACTATGACTCACATCCGCAACTCCTTTGGATGCGTAGGATGGCAA
GGGCAAGTTGATGGGCGCGCTCGTAGCGGGCACGGCTGTCGCGGGCGGGG
TTGCAGTTTGCAGCGCCGACCATGTCCCTTCTATTGATTATGGCTGGAAC
CACCACGGTCTTCTGGCGTCCTACGACTACCCTGCGTAAGTGAATGTGTG
GAGGATTGTTGGGCGATTCCGCGTGGTTAAGGCCTAGCGTCGGGCGTTCA
GTTCTGGGGTGGGCATCTCTCGCAGTCTGGGTGGACGAACGAAGGCTATC
CCCAAGCCGCTGACCTGAGCATCCTCATGAATTGCACCATGTTCCACAGT
GTCCGCCGTGGCTTCCAAGTGTACAGGGAGGTGTGCGCCTCGTGCCATGC
CCTTGAACACACCTATTTTCGCAACCTGGTGGGGGTGACCCACACCGAGG
AGGAGGTGAAGAAGATAGCCGAGTCCTACGACGTAGTGGACGGTCCCAAC
GCGGAGGGAGAGATGTTTGAGCGGCCTGGCAAGCTCTCGGACAAAATTCC
AGGGCCATATGCGAACAAGGAAGCGGCGCGTGCCGCCAACAATGGGGCCT
ACCCCCCCGACCTCTCCCTCATCACAAAGGCGCGTCCCGGGGGGGTGGAT
TACATCTTTGCCCTCCTGACTGGCTACATCGACCCACCCGAGGGGAAAGC
CATCCTTTCAGGCCTGAACTACAACCCGTACTTCCCCGGGGGCGCAATCG
CCATGGCGAGGCAGTTGCAGGACGGACAGTTGGAGTACGAAGACGGGACA
CCGGCCACCACGTCGCAGATGAGCAAGGACGTGGCCACCTTTTTGGCCTG
GGCGGCGGAGCCGGAGCACGATTATAGGAAGAAGGCGGGTGTGCAGTGGA
TCGGAGCCCTGCTTGTGGCCTTGGCGCTGACGGGCTTCTACAAGCGGTTC
CGGTGGTCGCCCCTGAAGACGGCGAAATTCCACTACGTGGCGTAGGGCGA
TGGGCCCATGGAAGAGGCCTTGAGCCGTGATGCCTCGAATCTAGTGCCGG
GAAGAGGGTGGAGCAGATGTCTCGGTGCGGGAGCTGTTGGGGGGTGGGTC
AGTGCCGTGGGGGGATCCTGGGAGTGGATGGGCGGTCCTGGTGAGGTCTC
AGCACGCGTATCTTACATTCATGATGAGTAGGAGGTTTAAGTGGCAAGTG
GGTATAGAATGACCATGAAAAGAAGGGAGGATGTACGGAGGAAATTTTGG
TATATACTTGAAGGACGGGGGGAGGGCTGGAGGGGAGGAGACGTCAAGTG
AGTGCTTGAAGGGACACAAAAGAAGCCTGCCTACGATAAAAAGTGGACAA
AGTGGGGTGGAGGAAGTGCCCTCCTTGATCGAAGAGA back to topCoding sequence (CDS) from alignment at KK037250.1:358915..360751- >rna8872 ID=rna8872|Name=rna8872|organism=Nannochloropsis gaditana|type=CDS|length=2736bp|location=Sequence derived from alignment at KK037250.1:358915..360751- (Nannochloropsis gaditana)
TGTCCGCCGTGGCTTCCAAGTGTACAGGGAGGTGTGCGCCTCGTGCCATG
CCCTTGAACACACCTATTTTCGCAACCTGGTGGGGGTGACCCACACCGAG
GAGGAGGTGAAGAAGATAGCCGAGTCCTACGACGTAGTGGACGGTCCCAA
CGCGGAGGGAGAGATGTTTGAGCGGCCTGGCAAGCTCTCGGACAAAATTC
CAGGGCCATATGCGAACAAGGAAGCGGCGCGTGCCGCCAACAATGGGGCC
TACCCCCCCGACCTCTCCCTCATCACAAAGGCGCGTCCCGGGGGGGTGGA
TTACATCTTTGCCCTCCTGACTGGCTACATCGACCCACCCGAGGGGAAAG
CCATCCTTTCAGGCCTGAACTACAACCCGTACTTCCCCGGGGGCGCAATC
GCCATGGCGAGGCAGTTGCAGGACGGACAGTTGGAGTACGAAGACGGGAC
ACCGGCCACCACGTCGCAGATGAGCAAGGACGTGGCCACCTTTTTGGCCT
GGGCGGCGGAGCCGGAGCACGATTATAGGAAGAAGGCGGGTGTGCAGTGG
ATCGGAGCCCTGCTTGTGGCCTTGGCGCTGACGGGCTTCTACAAGCGGTT
CCGGTGGTCGCCCCTGAAGACGGCGAAATTCCACTACGTGGCGTAGGATG
GCAAGGGCAAGTTGATGGGCGCGCTCGTAGCGGGCACGGCTGTCGCGGGC
GGGGTTGCAGTTTGCAGCGCCGACCATGTCCCTTCTATTGATTATGGCTG
GAACCACCACGGTCTTCTGGCGTCCTACGACTACCCTGCATGCTCACATG
CGCTTCAATACTTTGCATGCACAGCCTTTGGCTACTTACTTCGCGAGTGA
GGATGTTTTCTCGAGCGGCTGCGGCCTTCAAGCGGGTGAGGTTCATCCCA
CCTAGTGCCCAGTGTCCGCCGTGGCTTCCAAGTGTACAGGGAGGTGTGCG
CCTCGTGCCATGCCCTTGAACACACCTATTTTCGCAACCTGGTGGGGGTG
ACCCACACCGAGGAGGAGGTGAAGAAGATAGCCGAGTCCTACGACGTAGT
GGACGGTCCCAACGCGGAGGGAGAGATGTTTGAGCGGCCTGGCAAGCTCT
CGGACAAAATTCCAGGGCCATATGCGAACAAGGAAGCGGCGCGTGCCGCC
AACAATGGGGCCTACCCCCCCGACCTCTCCCTCATCACAAAGGCGCGTCC
CGGGGGGGTGGATTACATCTTTGCCCTCCTGACTGGCTACATCGACCCAC
CCGAGGGGAAAGCCATCCTTTCAGGCCTGAACTACAACCCGTACTTCCCC
GGGGGCGCAATCGCCATGGCGAGGCAGTTGCAGGACGGACAGTTGGAGTA
CGAAGACGGGACACCGGCCACCACGTCGCAGATGAGCAAGGACGTGGCCA
CCTTTTTGGCCTGGGCGGCGGAGCCGGAGCACGATTATAGGAAGAAGGCG
GGTGTGCAGTGGATCGGAGCCCTGCTTGTGGCCTTGGCGCTGACGGGCTT
CTACAAGCGGTTCCGGTGGTCGCCCCTGAAGACGGCGAAATTCCACTACG
TGGCGTAGGATGGCAAGGGCAAGTTGATGGGCGCGCTCGTAGCGGGCACG
GCTGTCGCGGGCGGGGTTGCAGTTTGCAGCGCCGACCATGTCCCTTCTAT
TGATTATGGCTGGAACCACCACGGTCTTCTGGCGTCCTACGACTACCCTG
CATGCTCACATGCGCTTCAATACTTTGCATGCACAGCCTTTGGCTACTTA
CTTCGCGAGTGAGGATGTTTTCTCGAGCGGCTGCGGCCTTCAAGCGGGTG
AGGTTCATCCCACCTAGTGCCCAGTGTCCGCCGTGGCTTCCAAGTGTACA
GGGAGGTGTGCGCCTCGTGCCATGCCCTTGAACACACCTATTTTCGCAAC
CTGGTGGGGGTGACCCACACCGAGGAGGAGGTGAAGAAGATAGCCGAGTC
CTACGACGTAGTGGACGGTCCCAACGCGGAGGGAGAGATGTTTGAGCGGC
CTGGCAAGCTCTCGGACAAAATTCCAGGGCCATATGCGAACAAGGAAGCG
GCGCGTGCCGCCAACAATGGGGCCTACCCCCCCGACCTCTCCCTCATCAC
AAAGGCGCGTCCCGGGGGGGTGGATTACATCTTTGCCCTCCTGACTGGCT
ACATCGACCCACCCGAGGGGAAAGCCATCCTTTCAGGCCTGAACTACAAC
CCGTACTTCCCCGGGGGCGCAATCGCCATGGCGAGGCAGTTGCAGGACGG
ACAGTTGGAGTACGAAGACGGGACACCGGCCACCACGTCGCAGATGAGCA
AGGACGTGGCCACCTTTTTGGCCTGGGCGGCGGAGCCGGAGCACGATTAT
AGGAAGAAGGCGGGTGTGCAGTGGATCGGAGCCCTGCTTGTGGCCTTGGC
GCTGACGGGCTTCTACAAGCGGTTCCGGTGGTCGCCCCTGAAGACGGCGA
AATTCCACTACGTGGCGTAGGATGGCAAGGGCAAGTTGATGGGCGCGCTC
GTAGCGGGCACGGCTGTCGCGGGCGGGGTTGCAGTTTGCAGCGCCGACCA
TGTCCCTTCTATTGATTATGGCTGGAACCACCACGGTCTTCTGGCGTCCT
ACGACTACCCTGCATGCTCACATGCGCTTCAATACTTTGCATGCACAGCC
TTTGGCTACTTACTTCGCGAGTGAGGATGTTTTCTCGAGCGGCTGCGGCC
TTCAAGCGGGTGAGGTTCATCCCACCTAGTGCCCAG back to top
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