|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100051g24.8884.mrna |
| Orig protein id | gnl|cribi|Naga_100051g24.8884 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:349323..352787 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8869 ID=rna8869|Name=rna8869|organism=Nannochloropsis gaditana|type=mRNA|length=1374bp
ATGTCATCTAAACGACCATCTGCGAGAGGCATGGATTTGTACCGGCGTGT
GCCGGCTGATCTGACAGAAACAAGCACACTAGGGGGGCTTTTCTCCATCG
TGGCAGGTGTATTTATGGTCGCTCTTTTTATCGTGGAGCTCATAAGCTTC
ATGTCGCACAGGACGGAGACCATGGTAGTATTGGATCATAGCCATGATCA
ACTGATTCAGATAAATTTCAACGTCACCATGCTCGACCTCCCCTGCCGCT
ACGCCGTCGTGGACGTGCTCGATGTCCTCGGGACCAACCGTATGAACGTG
AGCAAGAACATCGAGAAGTGGAACTTGGACGAGGCGGGCCGGCGCCGGTA
CTTCCAGGGCCGGAACCGGGAGGAACGGAGCATTCTCCACGACGAGCACC
ACGGGGCCTTGGAGGTCCTGCTGCAAAACGGCGAGCACGCGGTGCCTCTC
GCTGCAGACTCCTTCGACGAGTATTTGGAGAGCAACGAATTCACCTTCGT
CTCGTTCTATGCACCCTGGTGCATCTGGTGCCAGCGGCTGGCACCCACCT
GGGAGGCCTTCGCCGAGCACGTCGAGGAGGCGCAGATCCCTGTAAAGGTC
GCCAAGATTGACTGCGTGACCCACGCCCAGCTCTGCCGCGACCAGAAGGT
GCACGCTTTTCCCACGCTCCGGATGTTCAACCGGGCGAGGCCGCTCCCTC
CAGACTACAACACGGACCGCACCCTCGTCGCCCTAACTTCCTTCGTGACG
CGCAAACTGGCGGTGGAGGAGAAGAAGAAGAGTTGGCCGGAGCGGGACCA
GGAGTACGTTGAGCATCCAGGATGCATGCTTTCCGGTCACCTGCTGGTCA
ATCGCGTTCCCGGCAATTTCCACATCGAGGCTCGGAGCGCGGTCCACAAC
CTGAATGCCGCCATGACGAATCTCTCCCACGTAGTCAACCACCTGTCCTT
CGGCCCCCTCTACGACTCCCAAGTACTCTCCCGCCTGGAGCGCTTCTCCT
CCGAGTTCTACGTCTCCAACGCCTTGGACGGCCGGGACTTCGTCCTCGAG
GAGCCGCACAAGGCCCACCACCACTACCTCAAGGTGGTCGGGACTCTGTA
CGAGGTTCCTATGCGGTGGGGAAGGGCGGACATGCTCACCTACCAGATGC
TCCCTGAGACCTCTCTCATGACTTACGGCCTGGACGAAGTGCCTGAGGCG
AAGTTCTCCTACGAGGTGTCACCGATGGCTGTTATTGTGAAGAAAACAGG
CCGACGGTGGTATGAGTTCGTCACCTCTCTTTGTGGTATTCTCGGAGGGA
CATTCACTGTCGTGGGTCTGCTGGATTCCACCTTGCACCGTCTCTTAAAG
CCGTCATCGAACTTGCAGTCTTGA back to topprotein sequence of rna8869 >rna8869-protein ID=rna8869-protein|Name=rna8869|organism=Nannochloropsis gaditana|type=polypeptide|length=848bp
MALEWLTLQRLGSDEGAGAMPPGAAYEEVYTCLKAGLLVRDEDGSNAEKL
LAWVFEAGHAKTEPRARLLSFQLLPAVVEHSHPFVLSASLEKLTQLLRSA
MSTASPLSCRLLAIQTVEILLVKALGPGAGTALRQQCQQECLPRLAGSLL
ECCAPITSSSCVAPSAANSLADAHEDTPGLGLSGPVRGSPLPVTIAAFRA
LAIGAQNAGTSFKSFAGKLEAASYAALDSVWGRDPGLRGAAVACLAGLPS
TFTDSGRWTAMLKALLSEAARTLKQVWPEARVPSTLLSGPGGGRKGIDSS
FPGTGSGGSVHKPGWAPLPARPGKGGAGALKKYAWAARARIQSSLEAATA
LLNHGHSPGTSPVLLPSSAILAMCEVLLALTPRGHSNLGTTPAALPPTAH
HALQPTLLALGMDLLAAYLAAAKTSALGHLRGIARLVLRLLSGPDTAPVR
AQLLALFTQVVLVMGASAAPLLVEPALPEMTRLAYQYLRASTPFVVEERA
AASASVFSSPATGERTFGRDATALAGPQTKGKRQAEGMRAPSARDVEEVG
TAMFRALESAVLGCGALLSMDRRMSIDKLVGAGLCDLNRGVPRAGAATTY
FGAEGMSWLRRSGPLRAAFLNFATRTMLVPRQDGAGSALTPLASRVLNVL
VLDRDEDVARAAVLGRTVAESIIHPRAAPLFIPPALLKFDEEEGYTLPSG
ARSISGEHDPRSLRRQSGPEGEEASIAMTNVVSSLEEGKIAAVWSQQTVA
ATSLGAATSESQPKSSATVGSGADPLGTTKRASSSESSVASSHHDRKRSR
SSTAAKIETPTLNSARSKRDKEKEAEEEEEDLPLIVEDGGPDDSEDDR back to topmRNA from alignment at KK037250.1:349323..352787+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8869 ID=rna8869|Name=rna8869|organism=Nannochloropsis gaditana|type=mRNA|length=3465bp|location=Sequence derived from alignment at KK037250.1:349323..352787+ (Nannochloropsis gaditana)
ACGAACAGATCATATCGTCGCTATAAGTCTTACTGTCGGGCTGTTTATGA
ACCAAGGGCCCAACATCGCGCGTTGACGCAAGGTGCGTGGTATGATgacc
tccccatccccctcgctctttcCAGGATAGAGCCATTCCCAAGGCTTTTT
GTCAAGTCCGTGATGCGTCCTGATCTCACACGCATCGGGGGCCGATGCTT
TGGAAGATGCAATCATACAGTGATGATTCGTTTCGAGACTTTCCGCGCGG
ACGGCGCAAATGTGGGGAGGTTTTTGGCTTGCCGAGACGCAATGTTCAAT
TATCTCAGTACTTTGTCGGTGGGAAGCCCCTTCGGTTGGATCGTCATACA
TATACATTGCGTCACTTCGCACAGTATTATTGCCTCCCTCAAATCCCCAA
CCTACCTTTTTGAATGCTTAATTTCTCTCCTTTATGTTCCGGGTTTGCTT
CCCACGAATGGACCCGTTAAGGGGCTTGGTAGGGACTTGCTCTTATGTTG
TCGGACTGCATGATCCTCAACTAACGTAAAGGGCATACTTGTTTGCATAC
TTCTCACTTCTAAGCCTTCCCAACAAGCACAGCGCCTTGGCGCCTGTCCC
CACCATGGCCTTAGAATGGTTGACACTGCAAAGATTGGGTTCCGACGAAG
GAGCTGGGGCAATGCCCCCAGGAGCCGCCTACGAGGAGGTTTATACGTGC
TTAAAAGCAGGCCTGTTGGTACGAGATGAGGACGGCTCTAATGCTGAGAA
GCTCCTGGCTTGGGTCTTCGAGGCCGGGCACGCCAAGACCGAGCCCCGGG
CCCGCCTGTTGTCATTCCAGCTCCTGCCCGCAGTCGTCGAGCACAGCCAT
CCTTTTGTCCTGAGCGCATCATTGGAAAAACTCACGCAGTTGCTTCGATC
TGCCATGAGCACCGCATCCCCTCTTTCATGCCGGCTGCTGGCGATTCAGA
CGGTGGAAATTCTGCTTGTGAAGGCTCTGGGGCCAGGGGCTGGCACGGCC
TTGCGGCAACAGTGCCAGCAGGAATGCCTCCCTCGACTAGCCGGCTCTTT
ACTTGAATGCTGCGCGCCAATAACGTCGTCGTCGTGTGTAGCACCGTCAG
CCGCCAATTCCCTTGCCGACGCCCACGAAGACACCCCGGGGCTGGGGCTC
TCTGGGCCGGTCCGGGGGTCGCCCCTTCCCGTCACGATCGCCGCCTTTCG
CGCCCTGGCAATCGGAGCGCAAAACGCAGGAACGAGCTTCAAAAGCTTTG
CTGGAAAATTGGAAGCGGCGTCTTACGCAGCCTTGGATTCTgtctggggg
agggaccCTGGCCTGCGAGGCGCGGCTGTGGCTTGCTTGGCGGGCCTGCC
CTCTACCTTCACGGACAGCGGACGGTGGACCGCCATGCTCAAAGCCCTCC
TGAGCGAAGCCGCGCGGACACTCAAGCAAGTGTGGCCCGAGGCGAGGGTA
CCGTCGACACTCTTGTcagggcctggtggagggcgaaaAGGCATAGACAG
CAGCTTCCCTGGCACGGGCTCGGGAggctcggtccacaaacCGGGATGGG
cgcctctccccgcccgccctggaAAAGGTGGGGCAGGTGCGCTCAAGAAA
TATGCATGGGCTGCCAGGGCGCGAATCCAATCCTcgctggaggcggcgac
ggccCTGCTTAACCACGGGCACTCGCCAGGCACCagtcctgtcctcctcc
cttcctccgccatctTGGCTATGTGCGAGGTCTTGCTCGCCCTCACCCCG
CGAGGGCATTCCAATCTAGGGACCACGCcggctgcccttcctcccaccgc
gcaccacgccctccaaCCCACGCTCCTGGCCCTTGGGATGGACTTACTGG
CAGCCTACCTCGCCGCGGCCAAGACCTCCGCCTTAGGGCACTTGCGGGGC
ATTGCCCGCCTGGTCCTTCGGCTCTTATCGGGGCCAGACACCGCACCTGT
TCGCGCACAGCTTCTTGCTCTCTTTACTCAGGTGGTTCTCGTTATGGGGG
CATCTGCCGCCCCATTGCTCGTGGAGCCAGCTTTACCGGAAATGACCCGT
CTGGCTTACCAGTACCTGCGCGCCTCTACGCCTtttgtggtggaggagcg
ggcggcgGCCTCTGCTTCTGTCTTTTCTTCGCCCGCCACGGGAGAGAGGA
CCTTCGGTAGAGATGCCACGGCCTTGGCTGGACCGCAGACAAAGGGCAAA
AGGCAAGCGGAGGGGATGCGAGCCCCGTCGGCAAGGGACGTGGAAGAAGT
GGGTACCGCCATGTTCCGTGCGCTCGAGAGTGCAGTCTTGGGTTGTGGCG
CTTTGCTGTCCATGGACAGGCGCATGTCCATCGACAAGCTCGTGGGGGCA
GGCCTATGCGACCTCAACCGTGGAGTCCCACGGGCCGGCGCTGCAACCAC
GTATTTCGGTGCGGAGGGAATGTCGTGGCTGCGCCGGAGTGGCCCTCTCC
GAGCTGCGTTTTTGAATTTCGCGACGCGGACGATGCTTGTGCCCAGACAA
GATGGCGCTGGTTCAGCCCTGACGCCCTTAGCGTCTCGCGTACTGAATGT
CCTTGTTTTGGACAGAGACGAGGACGTTGCACGGGCGGCAGTGCTGGGTC
GAACGGTGGCAGAGAGTATCATCCACCCTCGCGCGGCACCACTCTTCATC
CCGCCAGCTTTGTTGAAgttcgacgaggaggaaggctacACTCTGCCATC
CGGTGCCCGATCTATCTCTGGAGAACATGATCCCCGCAGCCTGAGGCGAC
AAAGCGgcccggagggagaagaggcatcaATCGCCATGACCAATGtggtc
tcctccttggaagagggaaagattGCAGCCGTATGGTCGCAGCAGACTGT
CGCCGCAACTTCTTTGGGCGCAGCAACGTCTGAGAGCCAGCCGAAAAGCT
CCGCTACCGTAGGGTCAGGCGCCGACCCGCTCGGCACGACTAAGCGTGCA
AGTTCATCAGAGTCATCtgttgcttcctcccaccatgACAGAAAGCGATC
GAGGTCTTCGACTGCAGCCAAAATAGAGACTCCGACCCTCAATAGTGCCC
GATCAAAGCGTgacaaagaaaaggaggcggaagaggaggaggaagactta
CCTTTGAtagtggaggacgggggcccGGATGACAGCGAAGATGACAGATA
AAGGCAGGCGATTGTTCTCAAGAAGCAATCGATTCACAGAGCCCACGGCA
ACCTTTTCCCGGAAAAAATATTCTTCCTTACTTTAGCCATAGGATGACAA
GCGTTTATATTCCAATAGACTTCAGATGACCCCGTCTCATCCGACGAATA
TCATTCGCAGTAATGCACGGCCCTCCATTCCGCCTGCATCCACCAGTGCC
CTAGACTTTGTCGTGCGCACCTCTCAGACCTGGTTGCGACTCGACACTGT
TCCTCtcagaccctcctcccttccccacgtcGCTGTCCTTAGGGCATCCG
TCATCACCCCAACCC back to topCoding sequence (CDS) from alignment at KK037250.1:349323..352787+ >rna8869 ID=rna8869|Name=rna8869|organism=Nannochloropsis gaditana|type=CDS|length=2547bp|location=Sequence derived from alignment at KK037250.1:349323..352787+ (Nannochloropsis gaditana)
ATGGCCTTAGAATGGTTGACACTGCAAAGATTGGGTTCCGACGAAGGAGC
TGGGGCAATGCCCCCAGGAGCCGCCTACGAGGAGGTTTATACGTGCTTAA
AAGCAGGCCTGTTGGTACGAGATGAGGACGGCTCTAATGCTGAGAAGCTC
CTGGCTTGGGTCTTCGAGGCCGGGCACGCCAAGACCGAGCCCCGGGCCCG
CCTGTTGTCATTCCAGCTCCTGCCCGCAGTCGTCGAGCACAGCCATCCTT
TTGTCCTGAGCGCATCATTGGAAAAACTCACGCAGTTGCTTCGATCTGCC
ATGAGCACCGCATCCCCTCTTTCATGCCGGCTGCTGGCGATTCAGACGGT
GGAAATTCTGCTTGTGAAGGCTCTGGGGCCAGGGGCTGGCACGGCCTTGC
GGCAACAGTGCCAGCAGGAATGCCTCCCTCGACTAGCCGGCTCTTTACTT
GAATGCTGCGCGCCAATAACGTCGTCGTCGTGTGTAGCACCGTCAGCCGC
CAATTCCCTTGCCGACGCCCACGAAGACACCCCGGGGCTGGGGCTCTCTG
GGCCGGTCCGGGGGTCGCCCCTTCCCGTCACGATCGCCGCCTTTCGCGCC
CTGGCAATCGGAGCGCAAAACGCAGGAACGAGCTTCAAAAGCTTTGCTGG
AAAATTGGAAGCGGCGTCTTACGCAGCCTTGGATTCTgtctgggggaggg
accCTGGCCTGCGAGGCGCGGCTGTGGCTTGCTTGGCGGGCCTGCCCTCT
ACCTTCACGGACAGCGGACGGTGGACCGCCATGCTCAAAGCCCTCCTGAG
CGAAGCCGCGCGGACACTCAAGCAAGTGTGGCCCGAGGCGAGGGTACCGT
CGACACTCTTGTcagggcctggtggagggcgaaaAGGCATAGACAGCAGC
TTCCCTGGCACGGGCTCGGGAggctcggtccacaaacCGGGATGGGcgcc
tctccccgcccgccctggaAAAGGTGGGGCAGGTGCGCTCAAGAAATATG
CATGGGCTGCCAGGGCGCGAATCCAATCCTcgctggaggcggcgacggcc
CTGCTTAACCACGGGCACTCGCCAGGCACCagtcctgtcctcctcccttc
ctccgccatctTGGCTATGTGCGAGGTCTTGCTCGCCCTCACCCCGCGAG
GGCATTCCAATCTAGGGACCACGCcggctgcccttcctcccaccgcgcac
cacgccctccaaCCCACGCTCCTGGCCCTTGGGATGGACTTACTGGCAGC
CTACCTCGCCGCGGCCAAGACCTCCGCCTTAGGGCACTTGCGGGGCATTG
CCCGCCTGGTCCTTCGGCTCTTATCGGGGCCAGACACCGCACCTGTTCGC
GCACAGCTTCTTGCTCTCTTTACTCAGGTGGTTCTCGTTATGGGGGCATC
TGCCGCCCCATTGCTCGTGGAGCCAGCTTTACCGGAAATGACCCGTCTGG
CTTACCAGTACCTGCGCGCCTCTACGCCTtttgtggtggaggagcgggcg
gcgGCCTCTGCTTCTGTCTTTTCTTCGCCCGCCACGGGAGAGAGGACCTT
CGGTAGAGATGCCACGGCCTTGGCTGGACCGCAGACAAAGGGCAAAAGGC
AAGCGGAGGGGATGCGAGCCCCGTCGGCAAGGGACGTGGAAGAAGTGGGT
ACCGCCATGTTCCGTGCGCTCGAGAGTGCAGTCTTGGGTTGTGGCGCTTT
GCTGTCCATGGACAGGCGCATGTCCATCGACAAGCTCGTGGGGGCAGGCC
TATGCGACCTCAACCGTGGAGTCCCACGGGCCGGCGCTGCAACCACGTAT
TTCGGTGCGGAGGGAATGTCGTGGCTGCGCCGGAGTGGCCCTCTCCGAGC
TGCGTTTTTGAATTTCGCGACGCGGACGATGCTTGTGCCCAGACAAGATG
GCGCTGGTTCAGCCCTGACGCCCTTAGCGTCTCGCGTACTGAATGTCCTT
GTTTTGGACAGAGACGAGGACGTTGCACGGGCGGCAGTGCTGGGTCGAAC
GGTGGCAGAGAGTATCATCCACCCTCGCGCGGCACCACTCTTCATCCCGC
CAGCTTTGTTGAAgttcgacgaggaggaaggctacACTCTGCCATCCGGT
GCCCGATCTATCTCTGGAGAACATGATCCCCGCAGCCTGAGGCGACAAAG
CGgcccggagggagaagaggcatcaATCGCCATGACCAATGtggtctcct
ccttggaagagggaaagattGCAGCCGTATGGTCGCAGCAGACTGTCGCC
GCAACTTCTTTGGGCGCAGCAACGTCTGAGAGCCAGCCGAAAAGCTCCGC
TACCGTAGGGTCAGGCGCCGACCCGCTCGGCACGACTAAGCGTGCAAGTT
CATCAGAGTCATCtgttgcttcctcccaccatgACAGAAAGCGATCGAGG
TCTTCGACTGCAGCCAAAATAGAGACTCCGACCCTCAATAGTGCCCGATC
AAAGCGTgacaaagaaaaggaggcggaagaggaggaggaagacttaCCTT
TGAtagtggaggacgggggcccGGATGACAGCGAAGATGACAGATAA back to top
|