|
|
Properties
| Property Name | Value |
|---|
| Product | Thioredoxin domain protein |
| Orig transcript id | gnl|cribi|Naga_100051g23.8882.mrna |
| Orig protein id | gnl|cribi|Naga_100051g23.8882 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:346894..348967 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8868 ID=rna8868|Name=rna8868|organism=Nannochloropsis gaditana|type=mRNA|length=630bp
ATGGCTCACAGGAAAAAGGTTCTTTTCAAGTACATCATCTTGGGTGACAG
CGGCGTGGGGAAGACCTGCCTGATGAACCAATACGTACAGAAGCGCTTTG
ACAAGACATATAAAGCGACCATTGGAGCGGATTTTTTGACCAAGGACGTC
ATGATCGATGATAAGCTTGTGACACTTCAGATCTGGGACACGGCCGGGCA
GGAGAAGTTTCAATCCCTCGGGCAGGCCTTCTACAGGGGCGCGGACGTGT
GCATGCTGGTTTATGACATGACCAACCCCAAGTCCTTCGACAACTTGGAG
CACTGGCGCACCGATTTCCTCCACAATGCCTCGCCACCAGACCCGGATAA
CTTCCCCTTCATTGTCCTGGGGAACAAGGCGGACATGGAGGCGGACAGGA
AGGTCCCGAAGCACAAAGCCCTGACCTGGACCAAGAGTAAAGGGCCGAAG
CCCTTGCCTTACTTCGAGACAAGCGCCAAGGACGCCACCCGGGTGGAGGC
AGCATTTCTGGAGGCGGCACAACTGGCTCTTGAGCAGGTGTCGCAGGAAA
AGGATGATTACTTCCCGGATACGATCAATCTCTCGCAGCCCGCGACGCGG
AGGAGCGCCGAGCCTGCGGGCTGCTGTTAG back to topprotein sequence of rna8868 >rna8868-protein ID=rna8868-protein|Name=rna8868|organism=Nannochloropsis gaditana|type=polypeptide|length=457bp
MSSKRPSARGMDLYRRVPADLTETSTLGGLFSIVAGVFMVALFIVELISF
MSHRTETMVVLDHSHDQLIQINFNVTMLDLPCRYAVVDVLDVLGTNRMNV
SKNIEKWNLDEAGRRRYFQGRNREERSILHDEHHGALEVLLQNGEHAVPL
AADSFDEYLESNEFTFVSFYAPWCIWCQRLAPTWEAFAEHVEEAQIPVKV
AKIDCVTHAQLCRDQKVHAFPTLRMFNRARPLPPDYNTDRTLVALTSFVT
RKLAVEEKKKSWPERDQEYVEHPGCMLSGHLLVNRVPGNFHIEARSAVHN
LNAAMTNLSHVVNHLSFGPLYDSQVLSRLERFSSEFYVSNALDGRDFVLE
EPHKAHHHYLKVVGTLYEVPMRWGRADMLTYQMLPETSLMTYGLDEVPEA
KFSYEVSPMAVIVKKTGRRWYEFVTSLCGILGGTFTVVGLLDSTLHRLLK
PSSNLQS back to topmRNA from alignment at KK037250.1:346894..348967- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8868 ID=rna8868|Name=rna8868|organism=Nannochloropsis gaditana|type=mRNA|length=2074bp|location=Sequence derived from alignment at KK037250.1:346894..348967- (Nannochloropsis gaditana)
ATGTCATCTAAACGACCATCTGCGAGAGGCATGGATTTGTACCGGCGTGT
GCCGGCTGATCTGACAGAAACAAGCACACTAGGGGGGCTTTTCTCCATCG
TGGCAGGGTAAGTGATGAGGGTGAGATCCCATGAGGGGAAAGCACTGTAT
CGCGGGCGCGTATTTCGCTTTTCAAACCAACATATACAGATGCGGTCAAA
CACTCAAATGCACTCATTCTCCTCTGCCCTAAACAGTGTATTTATGGTCG
CTCTTTTTATCGTGGAGCTCATAAGCTTCATGTCGCACAGGACGGAGACC
ATGGTAGTATTGGATCATAGCCATGATCAACTGGTACGTGCACACACTTC
CCCCCTCGAGCCTTGCCTCTCTCCCGTCCTTGTGGCTACATGCATAACAA
AGCATGAAGTGGGTTTGGTTGACATATGCATGTGAGAAAACGCATAGGGC
TAAGTTCGTGCTGCTGTCTTGCCTGCGTCCCTCCTCCCCCACCAGATTCA
GATAAATTTCAACGTCACCATGCTCGACCTCCCCTGCCGCTACGCCGTCG
TGGACGTGCTCGATGTCCTCGGGACCAACCGTATGAACGTGAGCAAGAAC
ATCGAGAAGTGGAACTTGGACGAGGCGGGCCGGCGCCGGTACTTCCAGGG
CCGGAACCGGGAGGAACGGAGCATTCTCCACGACGAGCACCACGGGGCCT
TGGAGGTCCTGCTGCAAAACGGCGAGCACGCGGTGCCTCTCGCTGCAGAC
TCCTTCGACGAGTATTTGGAGAGCAACGAATTCACCTTCGTCTCGTTCTA
TGCACCCTGGTGCATCTGGTGCCAGCGGCTGGCACCCACCTGGGAGGCCT
TCGCCGAGCACGTCGAGGAGGCGCAGATCCCTGTAAAGGTCGCCAAGATT
GACTGCGTGACCCACGCCCAGCTCTGCCGCGACCAGAAGGTGCACGCTTT
TCCCACGCTCCGGATGTTCAACCGGGCGAGGCCGCTCCCTCCAGACTACA
ACACGGACCGCACCCTCGTCGCCCTAACTTCCTTCGTGACGCGCAAACTG
GCGGTGGAGGAGAAGAAGAAGAGTTGGCCGGAGCGGGACCAGGAGTACGT
TGAGCATCCAGGATGCATGGTGCGTCAAACGGGTTGGGGGTGGGAGGAAG
TGAGGGAGTGAGGGACGCAGAAAAGAGAGGAGTGGCTGGTTGGAGAGTTG
CGAGCAAAAGCGCCCTGCAATGTCCTCCGATGTCTCAACGCCTTATATCA
TCGTTTTTTCCTCTTCTACCCCCTCCTACAGCTTTCCGGTCACCTGCTGG
TCAATCGCGTTCCCGGCAATTTCCACATCGAGGCTCGGAGCGCGGTCCAC
AACCTGAATGCCGCCATGACGAATCTCTCCCACGTAGTCAACCACCTGTC
CTTCGGCCCCCTCTACGACTCCCAAGTACTCTCCCGCCTGGAGCGCTTCT
CCTCCGAGTTCTACGTCTCCAACGCCTTGGACGGCCGGGACTTCGTCCTC
GAGGAGCCGCACAAGGCCCACCACCACTACCTCAAGGTGGTCGGGACTCT
GTACGAGGTTCCTATGCGGTGGGGAAGGGCGGACATGCTCACCTACCAGA
TGCTCCCTGAGGTGAGTCTGGGGAGTTGAGGATTGCGGGAAGGCGGGATG
TAAAGGTGGCGGGACGGACGCCTGAGGTAGCGAGTCACCTAGAAGTATCT
CTTCGGACGCGAGTTCGCGATGCCTGACAGGGGCGTGGAAGACTTTGTCG
GGTAGTACTGCACCTTTCTGGGTGTCACTTACCAGGGAGAGTAGCAAGAT
TGGATGCGACGTTCCCTTTAATGTATCAAAAACCAATCGCTATCCCACTA
TTTCATAGACCTCTCTCATGACTTACGGCCTGGACGAAGTGCCTGAGGCG
AAGTTCTCCTACGAGGTGTCACCGATGGCTGTTATTGTGAAGAAAACAGG
CCGACGGTGGTATGAGTTCGTCACCTCTCTTTGTGGTATTCTCGGAGGGA
CATTCACTGTCGTGGGTCTGCTGGATTCCACCTTGCACCGTCTCTTAAAG
CCGTCATCGAACTTGCAGTCTTGA back to topCoding sequence (CDS) from alignment at KK037250.1:346894..348967- >rna8868 ID=rna8868|Name=rna8868|organism=Nannochloropsis gaditana|type=CDS|length=6870bp|location=Sequence derived from alignment at KK037250.1:346894..348967- (Nannochloropsis gaditana)
ACCTCTCTCATGACTTACGGCCTGGACGAAGTGCCTGAGGCGAAGTTCTC
CTACGAGGTGTCACCGATGGCTGTTATTGTGAAGAAAACAGGCCGACGGT
GGTATGAGTTCGTCACCTCTCTTTGTGGTATTCTCGGAGGGACATTCACT
GTCGTGGGTCTGCTGGATTCCACCTTGCACCGTCTCTTAAAGCCGTCATC
GAACTTGCAGTCTTGACTTTCCGGTCACCTGCTGGTCAATCGCGTTCCCG
GCAATTTCCACATCGAGGCTCGGAGCGCGGTCCACAACCTGAATGCCGCC
ATGACGAATCTCTCCCACGTAGTCAACCACCTGTCCTTCGGCCCCCTCTA
CGACTCCCAAGTACTCTCCCGCCTGGAGCGCTTCTCCTCCGAGTTCTACG
TCTCCAACGCCTTGGACGGCCGGGACTTCGTCCTCGAGGAGCCGCACAAG
GCCCACCACCACTACCTCAAGGTGGTCGGGACTCTGTACGAGGTTCCTAT
GCGGTGGGGAAGGGCGGACATGCTCACCTACCAGATGCTCCCTGAGATTC
AGATAAATTTCAACGTCACCATGCTCGACCTCCCCTGCCGCTACGCCGTC
GTGGACGTGCTCGATGTCCTCGGGACCAACCGTATGAACGTGAGCAAGAA
CATCGAGAAGTGGAACTTGGACGAGGCGGGCCGGCGCCGGTACTTCCAGG
GCCGGAACCGGGAGGAACGGAGCATTCTCCACGACGAGCACCACGGGGCC
TTGGAGGTCCTGCTGCAAAACGGCGAGCACGCGGTGCCTCTCGCTGCAGA
CTCCTTCGACGAGTATTTGGAGAGCAACGAATTCACCTTCGTCTCGTTCT
ATGCACCCTGGTGCATCTGGTGCCAGCGGCTGGCACCCACCTGGGAGGCC
TTCGCCGAGCACGTCGAGGAGGCGCAGATCCCTGTAAAGGTCGCCAAGAT
TGACTGCGTGACCCACGCCCAGCTCTGCCGCGACCAGAAGGTGCACGCTT
TTCCCACGCTCCGGATGTTCAACCGGGCGAGGCCGCTCCCTCCAGACTAC
AACACGGACCGCACCCTCGTCGCCCTAACTTCCTTCGTGACGCGCAAACT
GGCGGTGGAGGAGAAGAAGAAGAGTTGGCCGGAGCGGGACCAGGAGTACG
TTGAGCATCCAGGATGCATGTGTATTTATGGTCGCTCTTTTTATCGTGGA
GCTCATAAGCTTCATGTCGCACAGGACGGAGACCATGGTAGTATTGGATC
ATAGCCATGATCAACTGATGTCATCTAAACGACCATCTGCGAGAGGCATG
GATTTGTACCGGCGTGTGCCGGCTGATCTGACAGAAACAAGCACACTAGG
GGGGCTTTTCTCCATCGTGGCAGGACCTCTCTCATGACTTACGGCCTGGA
CGAAGTGCCTGAGGCGAAGTTCTCCTACGAGGTGTCACCGATGGCTGTTA
TTGTGAAGAAAACAGGCCGACGGTGGTATGAGTTCGTCACCTCTCTTTGT
GGTATTCTCGGAGGGACATTCACTGTCGTGGGTCTGCTGGATTCCACCTT
GCACCGTCTCTTAAAGCCGTCATCGAACTTGCAGTCTTGACTTTCCGGTC
ACCTGCTGGTCAATCGCGTTCCCGGCAATTTCCACATCGAGGCTCGGAGC
GCGGTCCACAACCTGAATGCCGCCATGACGAATCTCTCCCACGTAGTCAA
CCACCTGTCCTTCGGCCCCCTCTACGACTCCCAAGTACTCTCCCGCCTGG
AGCGCTTCTCCTCCGAGTTCTACGTCTCCAACGCCTTGGACGGCCGGGAC
TTCGTCCTCGAGGAGCCGCACAAGGCCCACCACCACTACCTCAAGGTGGT
CGGGACTCTGTACGAGGTTCCTATGCGGTGGGGAAGGGCGGACATGCTCA
CCTACCAGATGCTCCCTGAGATTCAGATAAATTTCAACGTCACCATGCTC
GACCTCCCCTGCCGCTACGCCGTCGTGGACGTGCTCGATGTCCTCGGGAC
CAACCGTATGAACGTGAGCAAGAACATCGAGAAGTGGAACTTGGACGAGG
CGGGCCGGCGCCGGTACTTCCAGGGCCGGAACCGGGAGGAACGGAGCATT
CTCCACGACGAGCACCACGGGGCCTTGGAGGTCCTGCTGCAAAACGGCGA
GCACGCGGTGCCTCTCGCTGCAGACTCCTTCGACGAGTATTTGGAGAGCA
ACGAATTCACCTTCGTCTCGTTCTATGCACCCTGGTGCATCTGGTGCCAG
CGGCTGGCACCCACCTGGGAGGCCTTCGCCGAGCACGTCGAGGAGGCGCA
GATCCCTGTAAAGGTCGCCAAGATTGACTGCGTGACCCACGCCCAGCTCT
GCCGCGACCAGAAGGTGCACGCTTTTCCCACGCTCCGGATGTTCAACCGG
GCGAGGCCGCTCCCTCCAGACTACAACACGGACCGCACCCTCGTCGCCCT
AACTTCCTTCGTGACGCGCAAACTGGCGGTGGAGGAGAAGAAGAAGAGTT
GGCCGGAGCGGGACCAGGAGTACGTTGAGCATCCAGGATGCATGTGTATT
TATGGTCGCTCTTTTTATCGTGGAGCTCATAAGCTTCATGTCGCACAGGA
CGGAGACCATGGTAGTATTGGATCATAGCCATGATCAACTGATGTCATCT
AAACGACCATCTGCGAGAGGCATGGATTTGTACCGGCGTGTGCCGGCTGA
TCTGACAGAAACAAGCACACTAGGGGGGCTTTTCTCCATCGTGGCAGGAC
CTCTCTCATGACTTACGGCCTGGACGAAGTGCCTGAGGCGAAGTTCTCCT
ACGAGGTGTCACCGATGGCTGTTATTGTGAAGAAAACAGGCCGACGGTGG
TATGAGTTCGTCACCTCTCTTTGTGGTATTCTCGGAGGGACATTCACTGT
CGTGGGTCTGCTGGATTCCACCTTGCACCGTCTCTTAAAGCCGTCATCGA
ACTTGCAGTCTTGACTTTCCGGTCACCTGCTGGTCAATCGCGTTCCCGGC
AATTTCCACATCGAGGCTCGGAGCGCGGTCCACAACCTGAATGCCGCCAT
GACGAATCTCTCCCACGTAGTCAACCACCTGTCCTTCGGCCCCCTCTACG
ACTCCCAAGTACTCTCCCGCCTGGAGCGCTTCTCCTCCGAGTTCTACGTC
TCCAACGCCTTGGACGGCCGGGACTTCGTCCTCGAGGAGCCGCACAAGGC
CCACCACCACTACCTCAAGGTGGTCGGGACTCTGTACGAGGTTCCTATGC
GGTGGGGAAGGGCGGACATGCTCACCTACCAGATGCTCCCTGAGATTCAG
ATAAATTTCAACGTCACCATGCTCGACCTCCCCTGCCGCTACGCCGTCGT
GGACGTGCTCGATGTCCTCGGGACCAACCGTATGAACGTGAGCAAGAACA
TCGAGAAGTGGAACTTGGACGAGGCGGGCCGGCGCCGGTACTTCCAGGGC
CGGAACCGGGAGGAACGGAGCATTCTCCACGACGAGCACCACGGGGCCTT
GGAGGTCCTGCTGCAAAACGGCGAGCACGCGGTGCCTCTCGCTGCAGACT
CCTTCGACGAGTATTTGGAGAGCAACGAATTCACCTTCGTCTCGTTCTAT
GCACCCTGGTGCATCTGGTGCCAGCGGCTGGCACCCACCTGGGAGGCCTT
CGCCGAGCACGTCGAGGAGGCGCAGATCCCTGTAAAGGTCGCCAAGATTG
ACTGCGTGACCCACGCCCAGCTCTGCCGCGACCAGAAGGTGCACGCTTTT
CCCACGCTCCGGATGTTCAACCGGGCGAGGCCGCTCCCTCCAGACTACAA
CACGGACCGCACCCTCGTCGCCCTAACTTCCTTCGTGACGCGCAAACTGG
CGGTGGAGGAGAAGAAGAAGAGTTGGCCGGAGCGGGACCAGGAGTACGTT
GAGCATCCAGGATGCATGTGTATTTATGGTCGCTCTTTTTATCGTGGAGC
TCATAAGCTTCATGTCGCACAGGACGGAGACCATGGTAGTATTGGATCAT
AGCCATGATCAACTGATGTCATCTAAACGACCATCTGCGAGAGGCATGGA
TTTGTACCGGCGTGTGCCGGCTGATCTGACAGAAACAAGCACACTAGGGG
GGCTTTTCTCCATCGTGGCAGGACCTCTCTCATGACTTACGGCCTGGACG
AAGTGCCTGAGGCGAAGTTCTCCTACGAGGTGTCACCGATGGCTGTTATT
GTGAAGAAAACAGGCCGACGGTGGTATGAGTTCGTCACCTCTCTTTGTGG
TATTCTCGGAGGGACATTCACTGTCGTGGGTCTGCTGGATTCCACCTTGC
ACCGTCTCTTAAAGCCGTCATCGAACTTGCAGTCTTGACTTTCCGGTCAC
CTGCTGGTCAATCGCGTTCCCGGCAATTTCCACATCGAGGCTCGGAGCGC
GGTCCACAACCTGAATGCCGCCATGACGAATCTCTCCCACGTAGTCAACC
ACCTGTCCTTCGGCCCCCTCTACGACTCCCAAGTACTCTCCCGCCTGGAG
CGCTTCTCCTCCGAGTTCTACGTCTCCAACGCCTTGGACGGCCGGGACTT
CGTCCTCGAGGAGCCGCACAAGGCCCACCACCACTACCTCAAGGTGGTCG
GGACTCTGTACGAGGTTCCTATGCGGTGGGGAAGGGCGGACATGCTCACC
TACCAGATGCTCCCTGAGATTCAGATAAATTTCAACGTCACCATGCTCGA
CCTCCCCTGCCGCTACGCCGTCGTGGACGTGCTCGATGTCCTCGGGACCA
ACCGTATGAACGTGAGCAAGAACATCGAGAAGTGGAACTTGGACGAGGCG
GGCCGGCGCCGGTACTTCCAGGGCCGGAACCGGGAGGAACGGAGCATTCT
CCACGACGAGCACCACGGGGCCTTGGAGGTCCTGCTGCAAAACGGCGAGC
ACGCGGTGCCTCTCGCTGCAGACTCCTTCGACGAGTATTTGGAGAGCAAC
GAATTCACCTTCGTCTCGTTCTATGCACCCTGGTGCATCTGGTGCCAGCG
GCTGGCACCCACCTGGGAGGCCTTCGCCGAGCACGTCGAGGAGGCGCAGA
TCCCTGTAAAGGTCGCCAAGATTGACTGCGTGACCCACGCCCAGCTCTGC
CGCGACCAGAAGGTGCACGCTTTTCCCACGCTCCGGATGTTCAACCGGGC
GAGGCCGCTCCCTCCAGACTACAACACGGACCGCACCCTCGTCGCCCTAA
CTTCCTTCGTGACGCGCAAACTGGCGGTGGAGGAGAAGAAGAAGAGTTGG
CCGGAGCGGGACCAGGAGTACGTTGAGCATCCAGGATGCATGTGTATTTA
TGGTCGCTCTTTTTATCGTGGAGCTCATAAGCTTCATGTCGCACAGGACG
GAGACCATGGTAGTATTGGATCATAGCCATGATCAACTGATGTCATCTAA
ACGACCATCTGCGAGAGGCATGGATTTGTACCGGCGTGTGCCGGCTGATC
TGACAGAAACAAGCACACTAGGGGGGCTTTTCTCCATCGTGGCAGGACCT
CTCTCATGACTTACGGCCTGGACGAAGTGCCTGAGGCGAAGTTCTCCTAC
GAGGTGTCACCGATGGCTGTTATTGTGAAGAAAACAGGCCGACGGTGGTA
TGAGTTCGTCACCTCTCTTTGTGGTATTCTCGGAGGGACATTCACTGTCG
TGGGTCTGCTGGATTCCACCTTGCACCGTCTCTTAAAGCCGTCATCGAAC
TTGCAGTCTTGACTTTCCGGTCACCTGCTGGTCAATCGCGTTCCCGGCAA
TTTCCACATCGAGGCTCGGAGCGCGGTCCACAACCTGAATGCCGCCATGA
CGAATCTCTCCCACGTAGTCAACCACCTGTCCTTCGGCCCCCTCTACGAC
TCCCAAGTACTCTCCCGCCTGGAGCGCTTCTCCTCCGAGTTCTACGTCTC
CAACGCCTTGGACGGCCGGGACTTCGTCCTCGAGGAGCCGCACAAGGCCC
ACCACCACTACCTCAAGGTGGTCGGGACTCTGTACGAGGTTCCTATGCGG
TGGGGAAGGGCGGACATGCTCACCTACCAGATGCTCCCTGAGATTCAGAT
AAATTTCAACGTCACCATGCTCGACCTCCCCTGCCGCTACGCCGTCGTGG
ACGTGCTCGATGTCCTCGGGACCAACCGTATGAACGTGAGCAAGAACATC
GAGAAGTGGAACTTGGACGAGGCGGGCCGGCGCCGGTACTTCCAGGGCCG
GAACCGGGAGGAACGGAGCATTCTCCACGACGAGCACCACGGGGCCTTGG
AGGTCCTGCTGCAAAACGGCGAGCACGCGGTGCCTCTCGCTGCAGACTCC
TTCGACGAGTATTTGGAGAGCAACGAATTCACCTTCGTCTCGTTCTATGC
ACCCTGGTGCATCTGGTGCCAGCGGCTGGCACCCACCTGGGAGGCCTTCG
CCGAGCACGTCGAGGAGGCGCAGATCCCTGTAAAGGTCGCCAAGATTGAC
TGCGTGACCCACGCCCAGCTCTGCCGCGACCAGAAGGTGCACGCTTTTCC
CACGCTCCGGATGTTCAACCGGGCGAGGCCGCTCCCTCCAGACTACAACA
CGGACCGCACCCTCGTCGCCCTAACTTCCTTCGTGACGCGCAAACTGGCG
GTGGAGGAGAAGAAGAAGAGTTGGCCGGAGCGGGACCAGGAGTACGTTGA
GCATCCAGGATGCATGTGTATTTATGGTCGCTCTTTTTATCGTGGAGCTC
ATAAGCTTCATGTCGCACAGGACGGAGACCATGGTAGTATTGGATCATAG
CCATGATCAACTGATGTCATCTAAACGACCATCTGCGAGAGGCATGGATT
TGTACCGGCGTGTGCCGGCTGATCTGACAGAAACAAGCACACTAGGGGGG
CTTTTCTCCATCGTGGCAGG back to top
|