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Properties
| Property Name | Value |
|---|
| Product | rab7 family gtpase |
| Orig transcript id | gnl|cribi|Naga_100051g22.8864.mrna |
| Orig protein id | gnl|cribi|Naga_100051g22.8864 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:345130..346449 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8867 ID=rna8867|Name=rna8867|organism=Nannochloropsis gaditana|type=mRNA|length=2811bp
ATGCCCTGGAAGCAACAAGAAAACGCATCGGGGATAGAATCTTATGAAGG
CAAGACGATGGCTTTGGCAAGGAAAGGAACTAAGCTCGGTTACGCTTGCT
TCGACGAGGACAAAAGCACCATCTGGGTCGATGAGATCCTAGTAAGCACA
GACATTCGGGAGACCGTCCAGGCGTTGAAGATGCACCTGGGTCCTACTTC
CTTTCTCATTGATGCCCACCTCCTTGCTGATGAGGGTTTCTGCAAACTCT
TGGGTAGCTCTGTTTCAGAGGATCGTCCACAATTTCACGTCAGAGTCGCC
AAGGCACGAGACTGGGACACCCGCCGAGCTGTATCTCAGCTTTGCCATTG
CTTGGATGTTCGCCAGCTTGCAAAAGGGCCTCACAGCAGGAATCGTGGGC
ATGCGATTTATCTGAGAAATGAACGACTTGCAACTTCTTCTGAGGCAGCC
TCTTCTCCGTTTTTCATGGATGACAAGGGTTCGGGGCAAGGGCGGGATGA
AGGCTTGGACCCGAGGCGGAATTACGATAGGCTCAGTTGTGTGATTGATT
TTATGAGCGAAAATCTCCTCGTCAAAGCGCTTGGGGCACTCTTAGTCCAC
CTGCAATGCACTACATTCCAACTTGAAATCGGTGGACGGGTTACGGTTCA
AACTTTGGAGAGATTTGATTTAGGAAGTTTCGTGCACTTAGACAGCAATG
CCTTGACAAGTCTGCAAATATTTCACGAAGAGAAGCACCCGAATGTGATA
AGCGGTCGAGGAAAGGCCAAAGAAGGATTTTCTCTTTTTGCTCTGCTCGA
TCAAACACACTCCCTTCCGGGAAGAAAATGCCTGAAAGAGTGGATGCTTC
GGCCTCTGCGGTCCGTGAGGGGGATTCGAGAGCGGCAAAACATGGTGGAG
TTGCTGCTACATCCGGAAGCGATGGAAGTGGTAACCAACGCCGGGATGCT
CTTGGGGAAAGTGGGCGACATTCAGCGGATACTGACACGAATGCGACGTG
CGGGTTCGACAGTAAATGATTGGTTGACACTCGCTAATACGGCGGAGCAC
ATCTTGTTGCTACAGAGCTGTCTAGCTGTCCTCGCCCATCTAACGGCGCG
GCTTTCGAGTGCCTCGGATAAGGGTCCAACAACAGCCGGAGAAGAAGAGC
ATAGAACGAACGAAGGTTCCTATTCATCGGCCATGGCGATGCTTCAAGGC
TTTTTGGACCGAATATCTCGCCAGGCTGTAGGAAGGGTGAGCGAAGCCCT
CACTAAGGTTCTTGACTTGGAAATAACGCGGGAGAGCAAGAGCATGGCGG
TTCGCTTGGGCTGTGATGAGGAATTAGATCGACTACGTGGGGACTACGAC
GGTTTAGAGGAATTTCTGTCCGAAGAGGCTCGTGGGGTTCTTGCTGAACA
GTCCTCGCAGTTGCTCTCAAAGATTTCCGTGCAATTTTTGCCGCAGGTCG
GCTTTCTCGTCATCGTGCAAGCCAATGAACGGATCGCTGTCGAGAACGAC
CCACGTTTCCGTTTTGTTTTCGCGGAGGGCGATGCACTGTACTATAAAAC
CCCCCGTATGGACGTCCTTGACGACAGCATCGGTGACCTGTCGGCGGCAA
TCCAGGACCGAGAGGGGCTTCTCCTGCGACAACTGGCAGAAGAGATTTTG
AAGGAGGAAACCGCTTTGGCAGAGGCAGTGCGGGCGTGTGCTGAGCTGGA
CGTCTTGATGGCCTTTGCGCAGCTCGCCGGGGGGCTTGCTTGGGTGCGAC
CGATGGTCACTGAGGAGAGAGTAGTGGTAGTCAAAGATGGTCGCCACCCT
CTGCAGGAGCTGACTGTAGAAACATTTATACCGAACGATGTGTTCCTGAT
GGGAGGAGATGGAAATGCGGTACATCGTGATGGAGGTGACGAAAAGCATG
CGCAAAAGCAAGGTTTGGAGCATTGCAATCAACACGGGACCCGCGGCGTT
GCTGTAGTGACGGGACCGAATTTCTCTGGGAAGAGTGTATACATAAAAAT
GGTGGGTGTGTTGGTCTATCTCGCGCATCTTGGATGCTTTCTTCCCTGCC
GACAAGCCCTAATTGGAGTGGTGGACTCTATTCGAACGCGGATAGCAAGT
GCGGAGACAGTAACGGTGCAACAGAGCTCCTTCACCATCGACTGCAGTCA
AATGAATGCGGTATTCCAAAACGCATCTCCATCCTCCCTTGTCCTTGTGG
ATGAATTTGGGAAAGGCTCGGCAGAAACCGATGGACTGGCCCTTCTCGTC
GCCTGTTTATCACGACTACAACGACTAGGAGCCCGAGCGCTGGTGACCAC
GCACTTTTTAGAGCTATTCCAGAGAAAAGGTCTTCTCTCACCCCAGCTCG
CTAATGACATCTCCTATCGCATGGATATATTTGTCCCCCCCCTCCCTCCT
CCTACCTCTCCTTCTGTTTCTTCCTCGCCCGCTACAGCAGCCTCCACACC
CAGCGCGGCCAATATTCACACCATTGTACCTCTTTTCAAACTCACCAAGG
GCGTAGCTAGTTCTTCAGATGGATTCTCTTGCGCGGCTCTGGCTGGCTTG
GCTCCCTCCCTCATAAAGCGTGCAGAGCAAATCGCAAAATACCATGTGGA
GGGTTCAATGAAAATCGAGCCTTTGGCACGACCGATAGCTTTTCGTGGTG
GTTCCGAGAATGAGAAAGAAGAGAAAAATCAAGGTCGCGAAGTCTTGCGT
TTCAATTTGCAGGCACAGGAGGCTCTGGAGCTTTTCTTGGGAGTCGAAGA
CTGGTTGCTTAAGAAGGATCAAGACCTACAAGGCTTCATAGAGTTGCTTG
AGCAGGTGTAA back to topprotein sequence of rna8867 >rna8867-protein ID=rna8867-protein|Name=rna8867|organism=Nannochloropsis gaditana|type=polypeptide|length=209bp
MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDV
MIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDMTNPKSFDNLE
HWRTDFLHNASPPDPDNFPFIVLGNKADMEADRKVPKHKALTWTKSKGPK
PLPYFETSAKDATRVEAAFLEAAQLALEQVSQEKDDYFPDTINLSQPATR
RSAEPAGCC back to topmRNA from alignment at KK037250.1:345130..346449- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8867 ID=rna8867|Name=rna8867|organism=Nannochloropsis gaditana|type=mRNA|length=1320bp|location=Sequence derived from alignment at KK037250.1:345130..346449- (Nannochloropsis gaditana)
ATGGCTCACAGGAAAAAGGTTCTTTTCAAGTACATCATCTTGGGTGACAG
CGGGTGGGTTGTCGGGAGGGTAAAGGAGGGGGACACGAGATACTTCTTTG
AACCTGATGGGTATGGGACAGTTTCTGAAGGCGTTCGCAGCCGCATAAAC
ATGTTATATCCATAGTTCATCTCACTACGGATGGCAGGTGTTCGATTTCC
TCACTCCCGAGCTTCTGACCCCAATACCTCTTTTCCCATCGTCCGAGCGC
TCACGTCTCACATCATGTCATGCACAGCGTGGGGAAGACCTGCCTGATGA
ACCAATACGTACAGAAGCGCTTTGACAAGACATATAAAGCGACCATTGGA
GCGGATTTTTTGACCAAGGACGTCATGATCGATGATAAGCTTGTGACACT
TCAGGTGCGTGGGCAGGCTGGAGAAGTGGGCACAAGGTGTTCTACATACT
TCAAGAGAGCAGGGGGAAATCTGTGAAGAAAGAGGCAACTCAAGTACGAT
CTTAAAGAGTGCCTCACAAACTTGGACGACCTACAGATCTGGGACACGGC
CGGGCAGGAGAAGTTTCAATCCCTCGGGCAGGCCTTCTACAGGGGCGCGG
ACGTGTGCATGCTGGTTTATGACATGACCAACCCCAAGGTAGGCAATTCG
CTCCCCAGGAGCCAGGAAAGTCAGCCTGAGAGTGAAATATTGAAAGGGTG
GACTTAGTTTATGGAGATGATAGGCCTCTATCCTCGCGCTCCCTCACTGT
TGTATCTTTCCCTATCCTCACCCCTCTTCCTCTCCATCGCAAGTCCTTCG
ACAACTTGGAGCACTGGCGCACCGATTTCCTCCACAATGCCTCGCCACCA
GACCCGGATAACTTCCCCTTCATTGTCCTGGGGAACAAGGCGGACATGGA
GGCGGACAGGAAGGTCCCGAAGCACAAAGCCCTGACCTGGACCAAGAGTA
AAGGGCCGAAGCCCTTGCCTTACTTCGAGACAAGCGCCAAGGACGCCACC
CGGGTGGAGGCAGCATTTCTGGAGGCGGCACAACTGGCTCTTGAGCAGGT
GTCGCAGGAAAAGGATGAGTGAGTGGGGCAGGAAGGGAAGGTTTCCGGCC
GGGAGGGATTGGAAGTGGGGGGGGAGCAAGGCTTGGAAAATATGTGTATA
TATAATATCGGAGGGTAGGTATCGCAGGTATGCGGGGAGCGCAGAACTAA
GATGTCTTGTTATTCGCGTACTGACCTTTTCTACCATTCACCTACAGTTA
CTTCCCGGATACGATCAATCTCTCGCAGCCCGCGACGCGGAGGAGCGCCG
AGCCTGCGGGCTGCTGTTAG back to topCoding sequence (CDS) from alignment at KK037250.1:345130..346449- >rna8867 ID=rna8867|Name=rna8867|organism=Nannochloropsis gaditana|type=CDS|length=3150bp|location=Sequence derived from alignment at KK037250.1:345130..346449- (Nannochloropsis gaditana)
TTACTTCCCGGATACGATCAATCTCTCGCAGCCCGCGACGCGGAGGAGCG
CCGAGCCTGCGGGCTGCTGTTAGTCCTTCGACAACTTGGAGCACTGGCGC
ACCGATTTCCTCCACAATGCCTCGCCACCAGACCCGGATAACTTCCCCTT
CATTGTCCTGGGGAACAAGGCGGACATGGAGGCGGACAGGAAGGTCCCGA
AGCACAAAGCCCTGACCTGGACCAAGAGTAAAGGGCCGAAGCCCTTGCCT
TACTTCGAGACAAGCGCCAAGGACGCCACCCGGGTGGAGGCAGCATTTCT
GGAGGCGGCACAACTGGCTCTTGAGCAGGTGTCGCAGGAAAAGGATGAAT
CTGGGACACGGCCGGGCAGGAGAAGTTTCAATCCCTCGGGCAGGCCTTCT
ACAGGGGCGCGGACGTGTGCATGCTGGTTTATGACATGACCAACCCCAAG
CGTGGGGAAGACCTGCCTGATGAACCAATACGTACAGAAGCGCTTTGACA
AGACATATAAAGCGACCATTGGAGCGGATTTTTTGACCAAGGACGTCATG
ATCGATGATAAGCTTGTGACACTTCAGATGGCTCACAGGAAAAAGGTTCT
TTTCAAGTACATCATCTTGGGTGACAGCGGTTACTTCCCGGATACGATCA
ATCTCTCGCAGCCCGCGACGCGGAGGAGCGCCGAGCCTGCGGGCTGCTGT
TAGTCCTTCGACAACTTGGAGCACTGGCGCACCGATTTCCTCCACAATGC
CTCGCCACCAGACCCGGATAACTTCCCCTTCATTGTCCTGGGGAACAAGG
CGGACATGGAGGCGGACAGGAAGGTCCCGAAGCACAAAGCCCTGACCTGG
ACCAAGAGTAAAGGGCCGAAGCCCTTGCCTTACTTCGAGACAAGCGCCAA
GGACGCCACCCGGGTGGAGGCAGCATTTCTGGAGGCGGCACAACTGGCTC
TTGAGCAGGTGTCGCAGGAAAAGGATGAATCTGGGACACGGCCGGGCAGG
AGAAGTTTCAATCCCTCGGGCAGGCCTTCTACAGGGGCGCGGACGTGTGC
ATGCTGGTTTATGACATGACCAACCCCAAGCGTGGGGAAGACCTGCCTGA
TGAACCAATACGTACAGAAGCGCTTTGACAAGACATATAAAGCGACCATT
GGAGCGGATTTTTTGACCAAGGACGTCATGATCGATGATAAGCTTGTGAC
ACTTCAGATGGCTCACAGGAAAAAGGTTCTTTTCAAGTACATCATCTTGG
GTGACAGCGGTTACTTCCCGGATACGATCAATCTCTCGCAGCCCGCGACG
CGGAGGAGCGCCGAGCCTGCGGGCTGCTGTTAGTCCTTCGACAACTTGGA
GCACTGGCGCACCGATTTCCTCCACAATGCCTCGCCACCAGACCCGGATA
ACTTCCCCTTCATTGTCCTGGGGAACAAGGCGGACATGGAGGCGGACAGG
AAGGTCCCGAAGCACAAAGCCCTGACCTGGACCAAGAGTAAAGGGCCGAA
GCCCTTGCCTTACTTCGAGACAAGCGCCAAGGACGCCACCCGGGTGGAGG
CAGCATTTCTGGAGGCGGCACAACTGGCTCTTGAGCAGGTGTCGCAGGAA
AAGGATGAATCTGGGACACGGCCGGGCAGGAGAAGTTTCAATCCCTCGGG
CAGGCCTTCTACAGGGGCGCGGACGTGTGCATGCTGGTTTATGACATGAC
CAACCCCAAGCGTGGGGAAGACCTGCCTGATGAACCAATACGTACAGAAG
CGCTTTGACAAGACATATAAAGCGACCATTGGAGCGGATTTTTTGACCAA
GGACGTCATGATCGATGATAAGCTTGTGACACTTCAGATGGCTCACAGGA
AAAAGGTTCTTTTCAAGTACATCATCTTGGGTGACAGCGGTTACTTCCCG
GATACGATCAATCTCTCGCAGCCCGCGACGCGGAGGAGCGCCGAGCCTGC
GGGCTGCTGTTAGTCCTTCGACAACTTGGAGCACTGGCGCACCGATTTCC
TCCACAATGCCTCGCCACCAGACCCGGATAACTTCCCCTTCATTGTCCTG
GGGAACAAGGCGGACATGGAGGCGGACAGGAAGGTCCCGAAGCACAAAGC
CCTGACCTGGACCAAGAGTAAAGGGCCGAAGCCCTTGCCTTACTTCGAGA
CAAGCGCCAAGGACGCCACCCGGGTGGAGGCAGCATTTCTGGAGGCGGCA
CAACTGGCTCTTGAGCAGGTGTCGCAGGAAAAGGATGAATCTGGGACACG
GCCGGGCAGGAGAAGTTTCAATCCCTCGGGCAGGCCTTCTACAGGGGCGC
GGACGTGTGCATGCTGGTTTATGACATGACCAACCCCAAGCGTGGGGAAG
ACCTGCCTGATGAACCAATACGTACAGAAGCGCTTTGACAAGACATATAA
AGCGACCATTGGAGCGGATTTTTTGACCAAGGACGTCATGATCGATGATA
AGCTTGTGACACTTCAGATGGCTCACAGGAAAAAGGTTCTTTTCAAGTAC
ATCATCTTGGGTGACAGCGGTTACTTCCCGGATACGATCAATCTCTCGCA
GCCCGCGACGCGGAGGAGCGCCGAGCCTGCGGGCTGCTGTTAGTCCTTCG
ACAACTTGGAGCACTGGCGCACCGATTTCCTCCACAATGCCTCGCCACCA
GACCCGGATAACTTCCCCTTCATTGTCCTGGGGAACAAGGCGGACATGGA
GGCGGACAGGAAGGTCCCGAAGCACAAAGCCCTGACCTGGACCAAGAGTA
AAGGGCCGAAGCCCTTGCCTTACTTCGAGACAAGCGCCAAGGACGCCACC
CGGGTGGAGGCAGCATTTCTGGAGGCGGCACAACTGGCTCTTGAGCAGGT
GTCGCAGGAAAAGGATGAATCTGGGACACGGCCGGGCAGGAGAAGTTTCA
ATCCCTCGGGCAGGCCTTCTACAGGGGCGCGGACGTGTGCATGCTGGTTT
ATGACATGACCAACCCCAAGCGTGGGGAAGACCTGCCTGATGAACCAATA
CGTACAGAAGCGCTTTGACAAGACATATAAAGCGACCATTGGAGCGGATT
TTTTGACCAAGGACGTCATGATCGATGATAAGCTTGTGACACTTCAGATG
GCTCACAGGAAAAAGGTTCTTTTCAAGTACATCATCTTGGGTGACAGCGG back to top
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