rna8862, rna8862 (mRNA) Nannochloropsis gaditana

Overview
Namerna8862
Unique Namerna8862
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length813
Alignment locationKK037250.1:333994..335286 -

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Properties
Property NameValue
ProductNicotinamide N-methyltransferase, putative
Orig transcript idgnl|cribi|Naga_100051g16.8868.mrna
Orig protein idgnl|cribi|Naga_100051g16.8868
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:333994..335286 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100051g16gene8592Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21829.1cds8832Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8862rna8862-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8862 ID=rna8862|Name=rna8862|organism=Nannochloropsis gaditana|type=mRNA|length=813bp
ATGCACCTGGTAACATCCTTCCTGCTGCTGATTCTTGGGCTTTCCTCTGC
CGCTGGTGCGTTCGTTCCTCCTGTGAGCACCATTACTTTGCGATCAGGTC
GCCTCCTGCTCAGCACCTCATCACCCCTGCGCCGAGTGTCGAGGACGATT
CGTGGTTTCAAAATGGCATCATCAGGCAACAACGGATGTCCCAAGCCTAC
CTTGACCTTTGTCACAGGCAATGCCAAGAAGCTTGAAGAAGTCCGAGCAA
TATTGGGGGCCGACGCGAAGACAGGTGCTGTGCTGCCTTTCGATGTCGTA
AGTCAGAAAATAGACCTTCCTGAACTTCAGGGTGAGCCTGAGGACGTGGC
AAGAGAAAAGTGCCTTCTGGCTGTCAAAGAGGTGAAGGGCCCTACAATGG
TGGAGGACACCGCTTTGTGTTTCAATGCATTGGGCGGACTACCAGGAGTG
TACATCAAGTGGTTTTTGGAAAAGCTGGGACATGAGGGCTTGAACAATCT
GCTCGCAGCCTACGAGGACAAAAGTGCGTACGCCCTCTGCACTTTTGCTT
ACTGCCCAGGGGTCGGACAAGAGGTGCTGGTGTTCGACGGGCGCACACCA
GGCAAGATCGTCCCGGCGCGCGGCCCCCACGCTTTTGGTTGGGACCCTGT
CTTCGAGCCTGCCGACGGACAGTCCGGCGGGTCCGAGCCTCCTAAGACGT
ACGCAGAGATGGACAAGGATATGAAAAACAGCATTTCGCACAGGTACAGG
GCGGTGGCGAAATTGCGGGATTTTCTCTTGTCACCGTCTGGAAAGATGGT
GGTGGAGGAGTGA
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protein sequence of rna8862

>rna8862-protein ID=rna8862-protein|Name=rna8862|organism=Nannochloropsis gaditana|type=polypeptide|length=430bp
MPPDDGHSMTTLPDEAGRERAEEHIDSLLLPARRLLRQHAPVREILKEIK
EHVSPLDWASWHVQKCIHRMLLSDPVQDIFPLAPQYRATFIRRLCDELEE
AVRRNEEGEVIEPIFRELNVLLNQPARSFAPGEGATHYVTFECPVCKPVH
SSFIAHDGLDIPSFQKVKHANNRDGQQDEKESNTRILAIRMAPKENAVGL
KLWEACYVLSETLLRNPELCYGRDVVELGAGVGLLGLVAAYCAGAAHVTL
TDVDDKVLLFLRANVEANVTTGALATLASNGHLAPRRAEALVPSIDVAPL
DWTRSREAEALFDPGARRKGHLGMRSRTILAADCVYDRDLIPAFVDTLTI
ALRALPPPHQTLVLVASTLRNPATFACFQGLVATKGLVMEDVTDSLADRN
GNASPFYCPNRAAVRLTRISLPSGSERVHE
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mRNA from alignment at KK037250.1:333994..335286-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8862 ID=rna8862|Name=rna8862|organism=Nannochloropsis gaditana|type=mRNA|length=1293bp|location=Sequence derived from alignment at KK037250.1:333994..335286- (Nannochloropsis gaditana)
ATGCCTCCAGACGACGGGCACAGCATGACGACGTTACCCGACGAGGCTGG CAGGGAGAGGGCGGAGGAGCATATCGACAGTCTACTACTTCCCGCACGAC GATTGCTAAGGCAACACGCCCCGGTACGGGAAATTCTGAAAGAAATTAAG GAGCATGTCTCACCGTTGGATTGGGCGTCGTGGCATGTCCAAAAATGCAT CCACCGCATGCTTCTCTCGGACCCAGTGCAAGACATCTTTCCTCTAGCGC CGCAGTACCGGGCAACCTTCATCCGCCGACTATGCGACGAGCTGGAAGAG GCCGTTCGAAGAAATGAAGAAGGAGAAGTGATAGAACCAATTTTCCGGGA GCTCAACGTCCTCCTTAATCAGCCTGCACGCAGTTTTGCACCTGGAGAGG GTGCTACACACTACGTTACCTTCGAGTGCCCCGTCTGCAAGCCTGTTCAT AGTTCATTTATTGCTCACGATGGACTTGATATACCAAGTTTTCAAAAAGT AAAGCACGCAAACAATAGAGATGGTCAGCAGGATGAAAAAGAGAGCAATA CGCGAATTTTAGCAATACGCATGGCTCCAAAAGAAAACGCGGTGGGACTA AAGCTGTGGGAAGCATGCTATGTCTTGAGCGAGACATTGTTGAGGAATCC AGAACTGTGCTATGGCAGAGACGTGGTTGAGTTGGGAGCTGGAGTGGGCT TGCTTGGTTTGGTGGCGGCCTATTGCGCAGGTGCGGCGCACGTGACACTA ACGGATGTGGACGATAAGGTCCTCCTTTTCCTCCGTGCCAACGTAGAAGC CAATGTCACGACTGGTGCCTTGGCCACTCTCGCTTCTAATGGGCATCTGG CCCCAAGGAGGGCGGAGGCGCTCGTCCCATCTATTGATGTAGCCCCCTTG GACTGGACTAGATCCCGCGAAGCTGAAGCCTTGTTCGACCCGGGTGCCCG GCGAAAGGGTCACTTGGGCATGAGAAGTCGGACCATCCTGGCTGCAGATT GCGTCTACGACCGGGACTTGATTCCCGCCTTCGTCGACACTCTCACGATC GCTCTCAGGGCCTTGCCTCCCCCCCATCAGACCCTCGTCCTGGTTGCCTC TACGCTGCGGAACCCCGCCACGTTCGCATGTTTTCAAGGGTTGGTGGCGA CGAAAGGATTGGTCATGGAGGATGTGACGGATTCATTGGCCGACAGGAAC GGCAACGCTTCGCCCTTCTACTGCCCCAACAGGGCAGCGGTGCGCCTGAC CAGGATTAGCCTTCCATCAGGGTCCGAACGAGTACACGAATGA
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Coding sequence (CDS) from alignment at KK037250.1:333994..335286-

>rna8862 ID=rna8862|Name=rna8862|organism=Nannochloropsis gaditana|type=CDS|length=1293bp|location=Sequence derived from alignment at KK037250.1:333994..335286- (Nannochloropsis gaditana)
ATGCCTCCAGACGACGGGCACAGCATGACGACGTTACCCGACGAGGCTGG
CAGGGAGAGGGCGGAGGAGCATATCGACAGTCTACTACTTCCCGCACGAC
GATTGCTAAGGCAACACGCCCCGGTACGGGAAATTCTGAAAGAAATTAAG
GAGCATGTCTCACCGTTGGATTGGGCGTCGTGGCATGTCCAAAAATGCAT
CCACCGCATGCTTCTCTCGGACCCAGTGCAAGACATCTTTCCTCTAGCGC
CGCAGTACCGGGCAACCTTCATCCGCCGACTATGCGACGAGCTGGAAGAG
GCCGTTCGAAGAAATGAAGAAGGAGAAGTGATAGAACCAATTTTCCGGGA
GCTCAACGTCCTCCTTAATCAGCCTGCACGCAGTTTTGCACCTGGAGAGG
GTGCTACACACTACGTTACCTTCGAGTGCCCCGTCTGCAAGCCTGTTCAT
AGTTCATTTATTGCTCACGATGGACTTGATATACCAAGTTTTCAAAAAGT
AAAGCACGCAAACAATAGAGATGGTCAGCAGGATGAAAAAGAGAGCAATA
CGCGAATTTTAGCAATACGCATGGCTCCAAAAGAAAACGCGGTGGGACTA
AAGCTGTGGGAAGCATGCTATGTCTTGAGCGAGACATTGTTGAGGAATCC
AGAACTGTGCTATGGCAGAGACGTGGTTGAGTTGGGAGCTGGAGTGGGCT
TGCTTGGTTTGGTGGCGGCCTATTGCGCAGGTGCGGCGCACGTGACACTA
ACGGATGTGGACGATAAGGTCCTCCTTTTCCTCCGTGCCAACGTAGAAGC
CAATGTCACGACTGGTGCCTTGGCCACTCTCGCTTCTAATGGGCATCTGG
CCCCAAGGAGGGCGGAGGCGCTCGTCCCATCTATTGATGTAGCCCCCTTG
GACTGGACTAGATCCCGCGAAGCTGAAGCCTTGTTCGACCCGGGTGCCCG
GCGAAAGGGTCACTTGGGCATGAGAAGTCGGACCATCCTGGCTGCAGATT
GCGTCTACGACCGGGACTTGATTCCCGCCTTCGTCGACACTCTCACGATC
GCTCTCAGGGCCTTGCCTCCCCCCCATCAGACCCTCGTCCTGGTTGCCTC
TACGCTGCGGAACCCCGCCACGTTCGCATGTTTTCAAGGGTTGGTGGCGA
CGAAAGGATTGGTCATGGAGGATGTGACGGATTCATTGGCCGACAGGAAC
GGCAACGCTTCGCCCTTCTACTGCCCCAACAGGGCAGCGGTGCGCCTGAC
CAGGATTAGCCTTCCATCAGGGTCCGAACGAGTACACGAATGA
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Synonyms
Publications