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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100051g12.8881.mrna |
| Orig protein id | gnl|cribi|Naga_100051g12.8881 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:325002..327682 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8858 ID=rna8858|Name=rna8858|organism=Nannochloropsis gaditana|type=mRNA|length=927bp
AAGGGAATTGGGCACTCCGTGTTCGCCTACATTTTCAAGGAATATACGCA
CATTTGAGCGCTGACATCACTGTCCACATTGTACTGGTACCACCATACAG
GAATGGGCGGGTTGTTTTCTCGACACGGACGTCACCATGGTGGGAAGTCT
CCTAAAAAGCCCGTCCAAATCACGGACCACGACAGGGCAGTGCTGGACCT
GAAAGTAGCAAAAGACAGGCTGAAGCGTTATCAGATGAAGATGCATAGTG
AGAAGATGCGCTTGACGGAGAAAGCGAAGGAATTGGTGACTGCGGGACGA
AAGGATCGGGCGTTGCTCGTGCTAAAAATGCGACGCCTGAGGGAAGATGA
GCAGGCCAAGGCGGCGGGGCAGCTACTGAATGTTGAGCAGCTCATCACAC
AAATTGAATGGGAGAGAGAACAGCTCCAGGTTTTCGACGCTTTGAAGAGC
GGAAATCAGGCTTTAGAAGCCATTCACAAAATTGTATCTCTGGAGGAAGT
AGACAAGCTCATGGCGGACACGGCGGACTCCATCGCGTACGAGCAAGAAA
TATCCCGCCTCCTCTCCAACAACTTGTCCGCGGGCGCAGAAGAAGAGGTA
CTTAGGGAGTTCGATGAGCTGCAAGCGCTAATAGAAGCCCCGGAGCACAC
TCCTGTGGAAGCTGCTCCTGGAGCTCCGACCGTTGTTAGTGCGGACATGG
CTTCGAAAGATGCCAGCGAGCAAGCCGAGATAACCGAGGCTACAGAAGCA
GGATCTAGTCTGCCCGACCTCCCCGAGGTACCAAAGCATGAGATTCTTAC
CAAAACAAATGTTGATGTGAGAAGGGATAAAATCTCGAAAGAGACTACGT
CTGGAAACGCCCGAGGGGCTGGAACAGAGGAAGTGCACGTACAAGAAAAG
AAGGCCAAGGTGGCGGTCAGCGGATAA back to topprotein sequence of rna8858 >rna8858-protein ID=rna8858-protein|Name=rna8858|organism=Nannochloropsis gaditana|type=polypeptide|length=593bp
MECLSISSPLLENARSIAGILLSSHIFKVVAGLLLSSWLLCEIAFYFYLR
YIVLPELNRLTTPVEGAHTPWDEFHKIIDVVSQLKESYAFERFFSGWFLG
APIKDIRRGNVREMLAWALYSKAQSTLTVRQKACVEDVLYWLKMRFQIDC
PEGYNPQVRPMLLTLDKITYMHRPLVFYASLTVIQVLGHSVLTLLGFRRH
EVNGIAYWYRSRVRDVRPGEEASLPMVFFHGISPGLNLYLLVIHTLSRGR
KMVLMEVPHIAMCLNFKAKRLGDMVKTVEIIAKRHRMPYFSVVGHSFGSL
CAAWVSKHLKHNVRQLVLLDPVSLLLGLPDVCYNFLHKKPKTVMEHLLHY
GGSMEITIHHTLRRQFWWYEGQLFLDEIKCPVYVGLSGNDEIVPSAILKL
YIEDHLAKTHAEEHHRHLIRARRSSSRGVGNGSSHSQPHNQDSTCKTFEK
ETASVSSGKGQVAGPELVSGSGGLSTAPCHLNHTPGDERGCILQRIQYVY
WEGWSHGEILFRFPQLKALDMALREQEKLFRSPDVSAAIDMSRKGGAHRQ
SSLDHSRAVMSSHRDTRKLSTSTVVGVNENGGAGLSSSIKFKS back to topmRNA from alignment at KK037250.1:325002..327682+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8858 ID=rna8858|Name=rna8858|organism=Nannochloropsis gaditana|type=mRNA|length=2681bp|location=Sequence derived from alignment at KK037250.1:325002..327682+ (Nannochloropsis gaditana)
TTACATTTTCCACCGCGCACGTAGGAGTGAGGAgacaggacaaggaaggg
cggaggctAAGTCGGGCGTCGAAGGTGTTATTTGTGTGGAACCAGGCAGT
CTCTGTCATTGGAGGCACAGCAACATCATATTCTCAACGCTGCTATCGGC
TCGCTGAGTCCTGGAGGCACATCTCCTGTTTCTTTTCTCCAATCCAGGTC
AGTCGTGGGATTATACTGACACAAGAGGGGTGTCGGACCTGGGTATGGTC
ACATGGCAAAACCAGCTCATTCAGTGCACGACAATGCGCGACTGCTGATC
ACGTAGCGCTTTGGTAGAAACTCGTTTAAAAATTGTACGGATTTATTTTC
AGGTGTCCAACGAACTGAGATTGGGGCAATCTCATGTCATGCGATACTTT
CAAGCCCGTCCCCCACCATGCGTTTCTGGCCTCGTTGACGTTGCTCCGTG
TCCCTATTCCCCATAGGAAAGCAAGATCCATGGAATGCCtctcgatctcc
tcccccttgcttGAAAATGCCAGGAGCATTGCCGGGATTCTGCTCTCTTC
CCATATATTCAAAGTAGTTGCTGGGCTGCTCCTGAGCAGCTGGCTGCTAT
GCGAAATAGCTTTTTATTTTTACTTGCGATACATCGTCCTACCCGAGCTC
AATCGACTTACAACTCCTGTGGAGGGTGCTCACACGCCCTGGGACGAATT
TCACAAAATTATTGACGTGGTATCGCAGCTTAAGGTGCGCACCCTTCTCT
CTCGTCATCCTTGTCTGACTACCCGAGGGCCTCCTTCGTCGCTTTACCTT
ACAACACTTGATATCACTAATGGCCCCTTTCAGAATTTGTAAATATCCAG
ACATCAAATATCGATTTGTTAATTTTTTTTTGCATTCCCTCACCCTGACA
GGAGTCTTACGCCTTCGAGCGCTTCTTTTCAGGTTGGTTCTTGGGCGCAC
CAATCAAAGATATCCGTCGCGGAAACGTACGAGAAATGCTGGCATGGGCC
CTGTACAGCAAGGCTCAATCCACGCTAACGGTTCGACAAAAGGCTTGCGT
CGAGGATGTGAGTTTTGgggcgaagagaggaagaaaatgacgCTTGTCCA
TTTTCATGACTTTCAGTGTTAAATTCGGCCTTCCCCCTATTTTCGCTCAA
GACGATCTCAATATGGCCACCGTTTGACTTGATCACTCGTCTCTGGTGTT
CTCACTCCTCGCACAGGTCCTGTATTGGCTGAAGATGCGCTTCCAGATCG
ATTGCCCAGAGGGGTACAATCCCCAGGTACGGCCCATGCTCCTTACCCTC
GACAAGATCACGTACATGCATCGGCCGTTGGTCTTCTATGCCTCCTTAAC
GGTAATACAGGTCTTGGGTCACAGTGTGCTGACTTTGCTGGGCTTTCGAC
GGCACGAGGTGAACGGCATCGCCTATTGGTATCGGTCTCGGGTCAGGGAT
GTGCgccccggggaggaggcgagtcTGCCCATGGTCTTTTTCCATGGGAT
TTCGCCAGGGCTTAATTTATACTTGTTGGTAATTCACACGTTGTCGCGGG
GCCGCAAAATGGTGCTTATGGAGGTACCACACATCGCCATGTGCCTGAAC
TTCAAAGCGAAGCGCCTGGGTGATATGGTCAAAACGGTCGAGATCATCGC
GAAGCGGCATCGCATGCCTTATTTCTCGGTCGTCGGGCATTCATTCGGAA
GCTTGTGCGCGGCCTGGGTCTCCAAGCACCTGAAACACAACGTTCGTCAG
CTCGTGCTCTTGGACCccgtgtccctcctccttggcctcccgGACGTCTG
CTACAACTTCCTCCACAAGAAACCCAAGACCGTCATGGAGCACTTGCTCC
ACTACGGGGGCTCAATGGAGATCACGATCCATCACACGCTACGCAGGCAA
TTCTGGTGGTACGAAGGCCAGCTATTCTTGGATGAAATCAAGTGTCCCGT
GTACGTTGGCTTGAGCGGGAACGACGAGATCGTGCCTTCGGCCATCCTCA
AACTCTACATCGAAGATCACCTGGCCAAGACACACGCCGAGGAGCATCAT
CGGCATCTTATCCGAGCGCGACGGAGCAGCAGCCGTGGGGTTGGGAACGG
AAGCAGCCACAGCCAGCCGCACAACCAGGATTCCACCTGTAAGACCTTCG
AAAAGGAGACAGCTTCGGTCAGCAGTGGCAAGGGGCAAGTGGCTGGCCCT
GAACTGGTTTCAGGCAGCGGGGGGCTGTCAACCGCGCCCTGTCACTTGAA
CCATACGCCAGGAGACGAACGCGGGTGCATTTTGCAGAGAATACAGTACG
TGTACTGGGAAGGGTGGTCTCACGGGGAGATACTTTTCCGTTTTCCACAG
TTGAAAGCTCTAGATATGGCGCTACGAGAGCAAGAGAAGCTTTTTCGCTC
CCCCGATGTGAGCGCAGCCATAGATATGTCgcgcaaaggaggggcacATC
GACAGAGCAGCCTCGATCACTCTCGAGCGGTAATGAGCAGCCATAGGGAC
ACGAGAAAATTGAGCACGAGTACTGTCGTGGGGGTAAATGAGAATGGGGG
CGCGGGACTTAGTAGCAGCATAAAATTCAAATCTTAGCACGTAAATGACG
ACTTCCTCGATGAAATGGCGCGTGTCCCATTCGTCCTGAAGGTAAAACAT
TGAGAAATAATTCAAATTGTAGAGGTAATCA back to topCoding sequence (CDS) from alignment at KK037250.1:325002..327682+ >rna8858 ID=rna8858|Name=rna8858|organism=Nannochloropsis gaditana|type=CDS|length=5346bp|location=Sequence derived from alignment at KK037250.1:325002..327682+ (Nannochloropsis gaditana)
ATGGAATGCCtctcgatctcctcccccttgcttGAAAATGCCAGGAGCAT
TGCCGGGATTCTGCTCTCTTCCCATATATTCAAAGTAGTTGCTGGGCTGC
TCCTGAGCAGCTGGCTGCTATGCGAAATAGCTTTTTATTTTTACTTGCGA
TACATCGTCCTACCCGAGCTCAATCGACTTACAACTCCTGTGGAGGGTGC
TCACACGCCCTGGGACGAATTTCACAAAATTATTGACGTGGTATCGCAGC
TTAAGGAGTCTTACGCCTTCGAGCGCTTCTTTTCAGGTTGGTTCTTGGGC
GCACCAATCAAAGATATCCGTCGCGGAAACGTACGAGAAATGCTGGCATG
GGCCCTGTACAGCAAGGCTCAATCCACGCTAACGGTTCGACAAAAGGCTT
GCGTCGAGGATGTCCTGTATTGGCTGAAGATGCGCTTCCAGATCGATTGC
CCAGAGGGGTACAATCCCCAGGTACGGCCCATGCTCCTTACCCTCGACAA
GATCACGTACATGCATCGGCCGTTGGTCTTCTATGCCTCCTTAACGGTAA
TACAGGTCTTGGGTCACAGTGTGCTGACTTTGCTGGGCTTTCGACGGCAC
GAGGTGAACGGCATCGCCTATTGGTATCGGTCTCGGGTCAGGGATGTGCg
ccccggggaggaggcgagtcTGCCCATGGTCTTTTTCCATGGGATTTCGC
CAGGGCTTAATTTATACTTGTTGGTAATTCACACGTTGTCGCGGGGCCGC
AAAATGGTGCTTATGGAGGTACCACACATCGCCATGTGCCTGAACTTCAA
AGCGAAGCGCCTGGGTGATATGGTCAAAACGGTCGAGATCATCGCGAAGC
GGCATCGCATGCCTTATTTCTCGGTCGTCGGGCATTCATTCGGAAGCTTG
TGCGCGGCCTGGGTCTCCAAGCACCTGAAACACAACGTTCGTCAGCTCGT
GCTCTTGGACCccgtgtccctcctccttggcctcccgGACGTCTGCTACA
ACTTCCTCCACAAGAAACCCAAGACCGTCATGGAGCACTTGCTCCACTAC
GGGGGCTCAATGGAGATCACGATCCATCACACGCTACGCAGGCAATTCTG
GTGGTACGAAGGCCAGCTATTCTTGGATGAAATCAAGTGTCCCGTGTACG
TTGGCTTGAGCGGGAACGACGAGATCGTGCCTTCGGCCATCCTCAAACTC
TACATCGAAGATCACCTGGCCAAGACACACGCCGAGGAGCATCATCGGCA
TCTTATCCGAGCGCGACGGAGCAGCAGCCGTGGGGTTGGGAACGGAAGCA
GCCACAGCCAGCCGCACAACCAGGATTCCACCTGTAAGACCTTCGAAAAG
GAGACAGCTTCGGTCAGCAGTGGCAAGGGGCAAGTGGCTGGCCCTGAACT
GGTTTCAGGCAGCGGGGGGCTGTCAACCGCGCCCTGTCACTTGAACCATA
CGCCAGGAGACGAACGCGGGTGCATTTTGCAGAGAATACAGTACGTGTAC
TGGGAAGGGTGGTCTCACGGGGAGATACTTTTCCGTTTTCCACAGTTGAA
AGCTCTAGATATGGCGCTACGAGAGCAAGAGAAGCTTTTTCGCTCCCCCG
ATGTGAGCGCAGCCATAGATATGTCgcgcaaaggaggggcacATCGACAG
AGCAGCCTCGATCACTCTCGAGCGGTAATGAGCAGCCATAGGGACACGAG
AAAATTGAGCACGAGTACTGTCGTGGGGGTAAATGAGAATGGGGGCGCGG
GACTTAGTAGCAGCATAAAATTCAAATCTTAGATGGAATGCCtctcgatc
tcctcccccttgcttGAAAATGCCAGGAGCATTGCCGGGATTCTGCTCTC
TTCCCATATATTCAAAGTAGTTGCTGGGCTGCTCCTGAGCAGCTGGCTGC
TATGCGAAATAGCTTTTTATTTTTACTTGCGATACATCGTCCTACCCGAG
CTCAATCGACTTACAACTCCTGTGGAGGGTGCTCACACGCCCTGGGACGA
ATTTCACAAAATTATTGACGTGGTATCGCAGCTTAAGGAGTCTTACGCCT
TCGAGCGCTTCTTTTCAGGTTGGTTCTTGGGCGCACCAATCAAAGATATC
CGTCGCGGAAACGTACGAGAAATGCTGGCATGGGCCCTGTACAGCAAGGC
TCAATCCACGCTAACGGTTCGACAAAAGGCTTGCGTCGAGGATGTCCTGT
ATTGGCTGAAGATGCGCTTCCAGATCGATTGCCCAGAGGGGTACAATCCC
CAGGTACGGCCCATGCTCCTTACCCTCGACAAGATCACGTACATGCATCG
GCCGTTGGTCTTCTATGCCTCCTTAACGGTAATACAGGTCTTGGGTCACA
GTGTGCTGACTTTGCTGGGCTTTCGACGGCACGAGGTGAACGGCATCGCC
TATTGGTATCGGTCTCGGGTCAGGGATGTGCgccccggggaggaggcgag
tcTGCCCATGGTCTTTTTCCATGGGATTTCGCCAGGGCTTAATTTATACT
TGTTGGTAATTCACACGTTGTCGCGGGGCCGCAAAATGGTGCTTATGGAG
GTACCACACATCGCCATGTGCCTGAACTTCAAAGCGAAGCGCCTGGGTGA
TATGGTCAAAACGGTCGAGATCATCGCGAAGCGGCATCGCATGCCTTATT
TCTCGGTCGTCGGGCATTCATTCGGAAGCTTGTGCGCGGCCTGGGTCTCC
AAGCACCTGAAACACAACGTTCGTCAGCTCGTGCTCTTGGACCccgtgtc
cctcctccttggcctcccgGACGTCTGCTACAACTTCCTCCACAAGAAAC
CCAAGACCGTCATGGAGCACTTGCTCCACTACGGGGGCTCAATGGAGATC
ACGATCCATCACACGCTACGCAGGCAATTCTGGTGGTACGAAGGCCAGCT
ATTCTTGGATGAAATCAAGTGTCCCGTGTACGTTGGCTTGAGCGGGAACG
ACGAGATCGTGCCTTCGGCCATCCTCAAACTCTACATCGAAGATCACCTG
GCCAAGACACACGCCGAGGAGCATCATCGGCATCTTATCCGAGCGCGACG
GAGCAGCAGCCGTGGGGTTGGGAACGGAAGCAGCCACAGCCAGCCGCACA
ACCAGGATTCCACCTGTAAGACCTTCGAAAAGGAGACAGCTTCGGTCAGC
AGTGGCAAGGGGCAAGTGGCTGGCCCTGAACTGGTTTCAGGCAGCGGGGG
GCTGTCAACCGCGCCCTGTCACTTGAACCATACGCCAGGAGACGAACGCG
GGTGCATTTTGCAGAGAATACAGTACGTGTACTGGGAAGGGTGGTCTCAC
GGGGAGATACTTTTCCGTTTTCCACAGTTGAAAGCTCTAGATATGGCGCT
ACGAGAGCAAGAGAAGCTTTTTCGCTCCCCCGATGTGAGCGCAGCCATAG
ATATGTCgcgcaaaggaggggcacATCGACAGAGCAGCCTCGATCACTCT
CGAGCGGTAATGAGCAGCCATAGGGACACGAGAAAATTGAGCACGAGTAC
TGTCGTGGGGGTAAATGAGAATGGGGGCGCGGGACTTAGTAGCAGCATAA
AATTCAAATCTTAGATGGAATGCCtctcgatctcctcccccttgcttGAA
AATGCCAGGAGCATTGCCGGGATTCTGCTCTCTTCCCATATATTCAAAGT
AGTTGCTGGGCTGCTCCTGAGCAGCTGGCTGCTATGCGAAATAGCTTTTT
ATTTTTACTTGCGATACATCGTCCTACCCGAGCTCAATCGACTTACAACT
CCTGTGGAGGGTGCTCACACGCCCTGGGACGAATTTCACAAAATTATTGA
CGTGGTATCGCAGCTTAAGGAGTCTTACGCCTTCGAGCGCTTCTTTTCAG
GTTGGTTCTTGGGCGCACCAATCAAAGATATCCGTCGCGGAAACGTACGA
GAAATGCTGGCATGGGCCCTGTACAGCAAGGCTCAATCCACGCTAACGGT
TCGACAAAAGGCTTGCGTCGAGGATGTCCTGTATTGGCTGAAGATGCGCT
TCCAGATCGATTGCCCAGAGGGGTACAATCCCCAGGTACGGCCCATGCTC
CTTACCCTCGACAAGATCACGTACATGCATCGGCCGTTGGTCTTCTATGC
CTCCTTAACGGTAATACAGGTCTTGGGTCACAGTGTGCTGACTTTGCTGG
GCTTTCGACGGCACGAGGTGAACGGCATCGCCTATTGGTATCGGTCTCGG
GTCAGGGATGTGCgccccggggaggaggcgagtcTGCCCATGGTCTTTTT
CCATGGGATTTCGCCAGGGCTTAATTTATACTTGTTGGTAATTCACACGT
TGTCGCGGGGCCGCAAAATGGTGCTTATGGAGGTACCACACATCGCCATG
TGCCTGAACTTCAAAGCGAAGCGCCTGGGTGATATGGTCAAAACGGTCGA
GATCATCGCGAAGCGGCATCGCATGCCTTATTTCTCGGTCGTCGGGCATT
CATTCGGAAGCTTGTGCGCGGCCTGGGTCTCCAAGCACCTGAAACACAAC
GTTCGTCAGCTCGTGCTCTTGGACCccgtgtccctcctccttggcctccc
gGACGTCTGCTACAACTTCCTCCACAAGAAACCCAAGACCGTCATGGAGC
ACTTGCTCCACTACGGGGGCTCAATGGAGATCACGATCCATCACACGCTA
CGCAGGCAATTCTGGTGGTACGAAGGCCAGCTATTCTTGGATGAAATCAA
GTGTCCCGTGTACGTTGGCTTGAGCGGGAACGACGAGATCGTGCCTTCGG
CCATCCTCAAACTCTACATCGAAGATCACCTGGCCAAGACACACGCCGAG
GAGCATCATCGGCATCTTATCCGAGCGCGACGGAGCAGCAGCCGTGGGGT
TGGGAACGGAAGCAGCCACAGCCAGCCGCACAACCAGGATTCCACCTGTA
AGACCTTCGAAAAGGAGACAGCTTCGGTCAGCAGTGGCAAGGGGCAAGTG
GCTGGCCCTGAACTGGTTTCAGGCAGCGGGGGGCTGTCAACCGCGCCCTG
TCACTTGAACCATACGCCAGGAGACGAACGCGGGTGCATTTTGCAGAGAA
TACAGTACGTGTACTGGGAAGGGTGGTCTCACGGGGAGATACTTTTCCGT
TTTCCACAGTTGAAAGCTCTAGATATGGCGCTACGAGAGCAAGAGAAGCT
TTTTCGCTCCCCCGATGTGAGCGCAGCCATAGATATGTCgcgcaaaggag
gggcacATCGACAGAGCAGCCTCGATCACTCTCGAGCGGTAATGAGCAGC
CATAGGGACACGAGAAAATTGAGCACGAGTACTGTCGTGGGGGTAAATGA
GAATGGGGGCGCGGGACTTAGTAGCAGCATAAAATTCAAATCTTAG back to top
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