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Properties
Property Name | Value |
Product | xylulose kinase-like protein |
Orig transcript id | gnl|cribi|Naga_100051g9.8891.mrna |
Orig protein id | gnl|cribi|Naga_100051g9.8891 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037250.1 | supercontig | KK037250.1:315354..317984 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8855 ID=rna8855|Name=rna8855|organism=Nannochloropsis gaditana|type=mRNA|length=612bp ATGGACCTTGTTGGCTTGCGGAATGGAGGGGGGAGGCGACCTTCTACGCG CCTGAATGAAGGGGATACCCAGTCCAGGCGTTCCGGGAGCGGGCGAGGGG AAAGAAGTGACTTACAGCCTCGACTGGAGCCCTTAGTGATTTCGGAAAAA CTCTCGTCTTCCTCCGCCGGGAATGGTTCTCAAAGCACCAGCACGGGTAG CAAAGCCTCCCCAATGGATTGCACGATTTTGCCCTCTCTCAACACTAGTC GAGGGAGTGTCAGTTTTCCTACTCCGGCGAGCAACAGCCAGGGAAACGGC CTCTCACGCAGCCTGAGCAGCGCAAGCATCATGTCCTCGCCTTTGCCGCC TCTCGTGCAGACCCCCCACAGTAATGGGGCCGTGTCCGCGTCCTTCTTCA CGGAGGACGAGGAGGACTCCGAGGAGGAGACCAGTCCGCACGCTAAGGAA GTCATGGTGGCACTGTCACGGTCCAAGACTAAAGACACGAATCTGCCGTT GCTGGTTCCTTCTCTCGGAAAGGGCTCTCGAGGAGCAGATACTGACATCC CCTCAAACCAGAAAACATCATCAGCACTATCAGCGGCGCTCCGAACCAGC GAGTCGTCGTGA back to topprotein sequence of rna8855 >rna8855-protein ID=rna8855-protein|Name=rna8855|organism=Nannochloropsis gaditana|type=polypeptide|length=561bp MAAGRGLDEASSHANTGGASTALLLGIDLSTQSVTVVFLDAGTNRIVHID TLNFDRELPQFGTSAGLHVGKNGKVTSPVQMWLVGLDRILRRQERTLMGR VKAVSGSAQQHGSIFWTADGLAALRCMAPADSFSSNLYGGFALEDCPTWA DSSTQMECDAIESATGGPGAMAALTGSRAYCRFTGPQIARVARTEPLVWK HTARVSLVSSFLTSLLVGHPAPVDASDASGMNLMNVRTSEWCEELLEATA PGLAARLGTIVNPWESLGPISPYCAARFGFVTDCLVIPASGDNSCSVVGT GLACDQTASTLMVSLGTSDTLVGLTRSPRPGPEGHVMVSPRGPDEWFAML CYKNGALAREAVRDRVAGGCWKKFDDLVASAPPGNDGNLAMTLVMEEIVP VLPIRGSFRVDAQDEPVAALSEAHEARAVVEARFLSMRVHAGNLGLPTAP SRIIATGGGSMSTSLTQVLADVFNAPVLVADSSEAAAVGAALRAGHGLKC KKQARWVELLASPLKDFKVMATPNAQAAAAYPATLLKRFAAFERGLVAKA QKHPQAQQSRE back to topmRNA from alignment at KK037250.1:315354..317984- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8855 ID=rna8855|Name=rna8855|organism=Nannochloropsis gaditana|type=mRNA|length=2631bp|location=Sequence derived from alignment at KK037250.1:315354..317984- (Nannochloropsis gaditana) ACAACGACAAAAATTCACACTATGGATGATTTGCCAGTGCGTCGTCGTTT
TATTGTATCATTCTCATATGTACCACGCCTGTGGGGCATGGAAGCTGTCT
GCCTGTGTCTTTTTTTTTCGCTGGCCTATCGTCTGGGGCGTTGAGGGATG
CTACTAGTAGTACTACTTCAGGAACAGTATCACGGAGCTGCGGAGCTCAA
TCTAGGAGCATTCCGAGGAACGAGATTGAGAATTGACTCGACCCATCACA
ACCACCAATACAACCAGCATAGTTAGACAGAGCTCCCACACCTTTACGGC
CATGGCTGCGGGACGGGGCTTGGACGAGGCAAGCTCCCATGCTAACACCG
GCGGAGCATCGACTGCTCTCCTGTTAGGAATCGATCTGTCCACGCAATCC
GTCACAGTCGTATTTCTCGACGCGGGTACGAATCGCATCGTCCACATTGA
TACCCTCAATTTCGACCGAGAGTTGCCTCAATTTGGAACGTCCGCGGGAT
TGCACGTTGGTAAAAATGGCAAGGTGACCAGCCCTGTACAGATGTGGTTA
GTCGGTCTCGACAGGATCTTGCGACGTCAAGAACGGACTCTCATGGGTCG
TGTTAAAGCCGTGTCAGGCTCGGCACAGCAGCACGGAAGTATCTTTTGGA
CTGCAGACGGACTGGCAGCCTTGCGGTGCATGGCGCCGGCAGACAGCTTC
TCGTCCAATCTTTATGGCGGCTTTGCCCTGGAGGACTGCCCTACATGGGC
CGACTCCTCCACGCAAATGGAATGCGACGCCATCGAGTCCGCGACAGGTG
GTCCCGGGGCAATGGCGGCCTTGACTGGCTCGCGGGCTTACTGTCGCTTT
ACGGGCCCTCAGATCGCCCGCGTGGCCCGAACGGAGCCTCTCGTTTGGAA
ACACACGGCCCGCGTCTCTCTGGTCTCTTCCTTTTTGACTTCCTTGCTTG
TGGGACACCCTGCGCCTGTGGATGCGTCCGATGCATCTGGCATGAATCTG
ATGAACGTGCGGACCTCGGAGTGGTGCGAGGAGCTGCTGGAGGCCACAGC
TCCGGGGCTGGCGGCCCGGCTTGGGACCATTGTCAACCCCTGGGAGAGCC
TGGGGCCCATCTCTCCGTACTGTGCGGCCCGCTTTGGCTTTGTCACGGAT
TGTTTGGTCATCCCGGCCTCGGGCGACAACTCTTGCTCCGTGGTGGGGAC
GGGTCTGGCCTGCGACCAGACAGCTTCGACGCTGATGGTCAGTCTGGGCA
CCAGCGACACCCTGGTAGGCCTTACGCGCTCGCCCCGCCCGGGCCCCGAG
GGCCATGTCATGGTCTCTCCTCGCGGACCGGACGAGTGGTTCGCGATGCT
CTGTTACAAGAACGGGGCCTTGGCCAGAGAGGCGGTGCGAGACCGCGTGG
CCGGCGGGTGCTGGAAGAAATTTGACGACTTGGTGGCGTCGGCGCCGCCG
GGGAACGATGGGAACCTGGCGATGACGCTGGTAATGGAGGAAATCGTGCC
TGTGCTCCCTATTCGGGGCAGTTTCCGCGTGGACGCACAGGACGAGCCCG
TCGCCGCCTTGAGCGAGGCCCACGAAGCCCGGGCGGTGGTCGAGGCGCGC
TTCCTCTCCATGCGAGTACACGCTGGCAATCTGGGTCTGCCCACTGCCCC
TTCCCGCATCATTGCAACCGGCGGAGGGTCAATGAGCACGTCGCTCACGC
AGGTGCTGGCCGACGTGTTCAATGCCCCGGTCCTGGTGGCTGATTCGTCC
GAGGCGGCGGCGGTGGGGGCCGCCTTGCGAGCGGGACACGGGCTCAAGTG
CAAGAAACAAGCGCGGTGGGTTGAGCTTCTTGCCAGTCCCCTGAAAGACT
TCAAAGTTATGGCAACGCCGAATGCTCAAGCTGCAGCGGCGTATCCTGCC
ACCTTGCTGAAGCGTTTTGCAGCTTTTGAGCGTGGATTAGTTGCAAAAGC
GCAAAAGCATCCCCAAGCGCAGCAATCGAGAGAATAATATACATATGGTC
AATCTGTGCTTTATTTTGCCATTTTATGAGCACCGCGACAAGGATTAGAG
AAGAGGATGGTTTTCGCGGGCAACAAAGGGCCTCCAGGTTCTCGTATATA
TACGAGTTGTGTCCGACTTCTAGGGGTTCCCGTGGCCAAAGCATTACCCT
GTCTCATATTAGAGTTGTGAAATTTGCATACATTTGTACAGAGGAAGAAC
ATGATGGTGTGATCGCTGGGGTCCATGCAGTCAGGAAAGCCAGGCAGAGG
TCGTTAGATCGTGTCCAAGAGAGATAAGCAAGGCGTCGAGCCTCTGGTAT
TCATGGCACTTAATTCCTGCTTCTTTTTCCATGACAATCTGGGACGTTGA
CATAAGTATTGTGATATAATGAAGCAAATATCAGATTTTTATCGCTCCAA
CGCCTTTCACATTAAGTTTTCTTTCTTCCCACTGAGATCTCCCTCGGATA
TGTCCTGGCGCGGGACTAGCTGAATTGCCGCACTACGACATAAAATACTA
AGGCGATCATTTTCCACACCACGCGACATGATAAACAATGTCTACACAAA
GAAAAAGTGAGTAGAGGCATAGATGTCAGTGCAGTCGCTCCTTCTATCAT
GAGGTTTAGGGATGACGCAATGTTTTATCCC back to topCoding sequence (CDS) from alignment at KK037250.1:315354..317984- >rna8855 ID=rna8855|Name=rna8855|organism=Nannochloropsis gaditana|type=CDS|length=1686bp|location=Sequence derived from alignment at KK037250.1:315354..317984- (Nannochloropsis gaditana) ATGGCTGCGGGACGGGGCTTGGACGAGGCAAGCTCCCATGCTAACACCGG CGGAGCATCGACTGCTCTCCTGTTAGGAATCGATCTGTCCACGCAATCCG TCACAGTCGTATTTCTCGACGCGGGTACGAATCGCATCGTCCACATTGAT ACCCTCAATTTCGACCGAGAGTTGCCTCAATTTGGAACGTCCGCGGGATT GCACGTTGGTAAAAATGGCAAGGTGACCAGCCCTGTACAGATGTGGTTAG TCGGTCTCGACAGGATCTTGCGACGTCAAGAACGGACTCTCATGGGTCGT GTTAAAGCCGTGTCAGGCTCGGCACAGCAGCACGGAAGTATCTTTTGGAC TGCAGACGGACTGGCAGCCTTGCGGTGCATGGCGCCGGCAGACAGCTTCT CGTCCAATCTTTATGGCGGCTTTGCCCTGGAGGACTGCCCTACATGGGCC GACTCCTCCACGCAAATGGAATGCGACGCCATCGAGTCCGCGACAGGTGG TCCCGGGGCAATGGCGGCCTTGACTGGCTCGCGGGCTTACTGTCGCTTTA CGGGCCCTCAGATCGCCCGCGTGGCCCGAACGGAGCCTCTCGTTTGGAAA CACACGGCCCGCGTCTCTCTGGTCTCTTCCTTTTTGACTTCCTTGCTTGT GGGACACCCTGCGCCTGTGGATGCGTCCGATGCATCTGGCATGAATCTGA TGAACGTGCGGACCTCGGAGTGGTGCGAGGAGCTGCTGGAGGCCACAGCT CCGGGGCTGGCGGCCCGGCTTGGGACCATTGTCAACCCCTGGGAGAGCCT GGGGCCCATCTCTCCGTACTGTGCGGCCCGCTTTGGCTTTGTCACGGATT GTTTGGTCATCCCGGCCTCGGGCGACAACTCTTGCTCCGTGGTGGGGACG GGTCTGGCCTGCGACCAGACAGCTTCGACGCTGATGGTCAGTCTGGGCAC CAGCGACACCCTGGTAGGCCTTACGCGCTCGCCCCGCCCGGGCCCCGAGG GCCATGTCATGGTCTCTCCTCGCGGACCGGACGAGTGGTTCGCGATGCTC TGTTACAAGAACGGGGCCTTGGCCAGAGAGGCGGTGCGAGACCGCGTGGC CGGCGGGTGCTGGAAGAAATTTGACGACTTGGTGGCGTCGGCGCCGCCGG GGAACGATGGGAACCTGGCGATGACGCTGGTAATGGAGGAAATCGTGCCT GTGCTCCCTATTCGGGGCAGTTTCCGCGTGGACGCACAGGACGAGCCCGT CGCCGCCTTGAGCGAGGCCCACGAAGCCCGGGCGGTGGTCGAGGCGCGCT TCCTCTCCATGCGAGTACACGCTGGCAATCTGGGTCTGCCCACTGCCCCT TCCCGCATCATTGCAACCGGCGGAGGGTCAATGAGCACGTCGCTCACGCA GGTGCTGGCCGACGTGTTCAATGCCCCGGTCCTGGTGGCTGATTCGTCCG AGGCGGCGGCGGTGGGGGCCGCCTTGCGAGCGGGACACGGGCTCAAGTGC AAGAAACAAGCGCGGTGGGTTGAGCTTCTTGCCAGTCCCCTGAAAGACTT CAAAGTTATGGCAACGCCGAATGCTCAAGCTGCAGCGGCGTATCCTGCCA CCTTGCTGAAGCGTTTTGCAGCTTTTGAGCGTGGATTAGTTGCAAAAGCG CAAAAGCATCCCCAAGCGCAGCAATCGAGAGAATAA back to top
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