rna8841, rna8841 (mRNA) Nannochloropsis gaditana

Overview
Namerna8841
Unique Namerna8841
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2313
Alignment locationKK037250.1:282990..283422 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100169g11.556.mrna
Orig protein idgnl|cribi|Naga_100169g11.556
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:282990..283422 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100169g11gene8571Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8841rna8841-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21865.1cds8811Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8841 ID=rna8841|Name=rna8841|organism=Nannochloropsis gaditana|type=mRNA|length=2313bp
ATGCAGATGAATGGAAAAGATGACAAAATGGTAATAAAGGTACTTTGGAT
TCTCTCTATGCCGCGCCCCGGTCGGCGTTGTCTTTCCAGCATTGCGTTAT
CTTTCAAGGGAGTTGAAGCACGGTATGACAGGAGGTCTGCCATCGCGTCC
TGTGTACCAGCCGGGAAATCGAACATTTTCGGTTGTGGAAGGTTGACAGG
AGATATGGAACAGATGACAAGACAATATGCCACAGTAAAGAATAACTCTG
GTAAGTCAGGTCGCCGCAAGACGCGACCGCTGGAAAAGCTAGCGCCCTCA
GGGAACAAAAAGCCAGCAGGCCAAGACATGCTCGTTTATGAAGAAGAAGA
CACCGAGGACTGGAGCTCGTTTTTGGAAGAGTATGATGCGTTGGAAGCAG
AAGATGGCATGAGGGTCGCGTCGGATGCCTCTGCTTCTCAAGTCTCGGAG
GACGCTAAAATAGTGGAGGAGTATAGGCTTGAAGAGGATGCGGACGGAAA
CCTGCAAGTGATGCCCACAAAAAGAGAAGGGCTTAAATCGAAGATAAAAT
CAGCACACAATCTGCTGCAAAAGGCTCGTCAAGCAGGTGCCATGACGGAA
GATGATTGGTTCGAGTTTTTGCGGCGCACCGGCATGGACCGATCAGAGGA
AAACGATTTTCAGAGTGCCTTTTTCGAGGACGTTGGCGAGGGAGAACCTT
CTATCAAGCATCCCCCTCCTTTGCGAAAAGGCAGACACATGCGCAAGGCC
CCGCCAAAATTTGTGGACCGGATAGGCGTGGCCGTGACCGGAGGTAAGGG
CGGAAAGGGATGCATTAGTTTCGAGAAGATGGCAAACGCCAGAGGAGGGG
CGGTCAAACGTCCCTCGGGGGGCCACGGAGGCCAGGGTGGGGACGTGATT
TTTGTCGCGGATCCGCGCGTGCAGAGCCTGGGGATGGACCGGCACCATTT
CCATGGCAAGGCAGGGGGCTCTGGGGACTCGAACAAGAAACACGGGGCCC
GCGGTGCGCACGCGGTCGTTCGCGTCCCTTGCGGCACGGTGGTCAAGGAG
GTCTTGCGGAGCGGCAGGGGCGGGGGATATGAGCGGGTCCAAGTCTGCGA
CCTAGATCAGCCTTTAAGCTACTACCGGGCTGCCACAGGGGGACGCCCGG
GACTGGGCAACTCCGTGCAGGCGGGGCGAGCCCGTAACTCCGCCTCTGCC
TCCGGCAATTTTCGGTCCCCTGGCCATCAGGGTGAGGAGCGGTTCTATGA
GTTGGAGCTTAAAACGATCGCGGATGTGGGCCTGGTCGGCTACCCAAATG
CAGGAAAGTCCACCCTCTTGGGTGGGCTCTCCCGGGCCCGGCCGGCGGCA
GCCGCTTATGCTTTTACCACCCTCCACCCCACTGTGGGCCGAGTCGAGTA
CACGGATGCGGCCAGCGTGACGGTCGCGGACTTGCCCGGTCTTATCGAAG
GGGCTCACGCCAACAAGGGCTTGGGTCACGAGTTTCTCAGGCACATCGAA
CGGACCAAGGTACTGGTCTACGTGCTCGACGGGGTGGGGAGAGAGGGTGG
GGCGGGCGTGGACGACGGCAGTGTCGTGGAGGAGGCACCGGTGACTGTGT
TTCGGAAGTTAAAGAAAGAGCTGGAGCTGTACTGCCCTGGCTTGTCGCGC
CGCCCATCGTTAGTGTGGCTAAACAAAGCCGACTTGAACGCGGAGTGGGT
CAGCGAGGCCAAGGCGGCTGTGATGGCCGACATGAGCGGAGACGATGCAA
CAGCTGACCGCCCACAGGCATGGGGGGAATCGACGATGGGCCAGCGGGGG
CGGGTCCCGAATGTTCTTTCGGGCAGTGCACGCACGGGGGAAGGGATAGG
TGAGCTTGCGCACGAATTACGACGGGTTGTGGATAGGGTGGCTCAGGAGG
ACGAGAAAGCACAGGGTTACGGCGGAGGAGGAGGACATGGCGGTGGTGAG
GGCGGGAAGCTGTGGGCAAGGGAGACGGGGGGCTCGGATCACGCGCTCCC
GCACCGCCAGGGTGGGATTGAAGGCGTGGGCGGTAGGAATACCACGAAAA
GTGAAGGTTCATTTGTAACAGCTGATGTTGATTCGGCGGCGGATGATAAG
ACCATAAGCCTTGCTGAGGCATACGCAAAGGCCTTGGAGTTGACTCAGAG
ATTCAATGTTGAGTGGATGAATGCAGTGCAATGTGCGAATCAGAATATAC
ACCGTGCGCAATGCTATTCTGCGGCTTTGACAGTAACTTATCGGCAGGAC
TACTGGCTCGCACACGGGATGAGAATGATGAAAGCAGGAGAGCAAACGCG
GAGCGAGAGTTGA
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protein sequence of rna8841

>rna8841-protein ID=rna8841-protein|Name=rna8841|organism=Nannochloropsis gaditana|type=polypeptide|length=93bp
MFHKNCTCTLSGSAVYIMDSDGGNVTNQTRNPRGEESGKQRMPRLQRSSS
LCRKNNNYSFLARQSADLTILAMKNVQGWTQPGEMEQAGKIRG
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mRNA from alignment at KK037250.1:282990..283422-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8841 ID=rna8841|Name=rna8841|organism=Nannochloropsis gaditana|type=mRNA|length=433bp|location=Sequence derived from alignment at KK037250.1:282990..283422- (Nannochloropsis gaditana)
ATGTTTCACAAGTATAGCCGCATCCAATAAAAGTTTTATTTAATATTCAG
TCCTTTTTCTACATCGTGACATCTCCTAATAAAGAAATCCTATGGGGCCG
CCCGTTTCAATCCCAGAGCCTAGGATGGGAGGTTGACAACAATCGTCATC
TGATGCACGTAGGAATTGTACTTGTACATTGAGTGGATCTGCTGTCTATA
TTATGGACTCAGATGGAGGCAATGTGACGAATCAGACGCGGAACCCTAGA
GGAGAAGAAAGTGGGAAGCAGCGAATGCCAAGATTACAACGAAGCAGCTC
TTTATGTCGCAAAAACAACAACTATAGCTTCCTGGCAAGACAGAGCGCCG
ACTTGACGATCCTGGCGATGAAAAATGTGCAAGGTTGGACACAGCCGGGA
GAAATGGAGCAGGCTGGAAAAATCCGAGGATGA
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Coding sequence (CDS) from alignment at KK037250.1:282990..283422-

>rna8841 ID=rna8841|Name=rna8841|organism=Nannochloropsis gaditana|type=CDS|length=564bp|location=Sequence derived from alignment at KK037250.1:282990..283422- (Nannochloropsis gaditana)
GAATTGTACTTGTACATTGAGTGGATCTGCTGTCTATATTATGGACTCAG
ATGGAGGCAATGTGACGAATCAGACGCGGAACCCTAGAGGAGAAGAAAGT
GGGAAGCAGCGAATGCCAAGATTACAACGAAGCAGCTCTTTATGTCGCAA
AAACAACAACTATAGCTTCCTGGCAAGACAGAGCGCCGACTTGACGATCC
TGGCGATGAAAAATGTGCAAGGTTGGACACAGCCGGGAGAAATGGAGCAG
GCTGGAAAAATCCGAGGATGAATGTTTCACAAGAATTGTACTTGTACATT
GAGTGGATCTGCTGTCTATATTATGGACTCAGATGGAGGCAATGTGACGA
ATCAGACGCGGAACCCTAGAGGAGAAGAAAGTGGGAAGCAGCGAATGCCA
AGATTACAACGAAGCAGCTCTTTATGTCGCAAAAACAACAACTATAGCTT
CCTGGCAAGACAGAGCGCCGACTTGACGATCCTGGCGATGAAAAATGTGC
AAGGTTGGACACAGCCGGGAGAAATGGAGCAGGCTGGAAAAATCCGAGGA
TGAATGTTTCACAA
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Synonyms
Publications