rna8834, rna8834 (mRNA) Nannochloropsis gaditana

Overview
Namerna8834
Unique Namerna8834
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length414
Alignment locationKK037250.1:270378..270650 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100169g4.546.mrna
Orig protein idgnl|cribi|Naga_100169g4.546
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:270378..270650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100169g4gene8564Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8834rna8834-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21855.1cds8804Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8834 ID=rna8834|Name=rna8834|organism=Nannochloropsis gaditana|type=mRNA|length=414bp
ATGCTGGATATGTGCCAAAATTTGGAACAGGACAAAGTAATTTGCATGGG
TGACTTGTGTCAGTGCTGTGGATGGTGGCACCTCAGATATGCTCAAGCTA
TCGAAGCATTACCTATCATAATTCTTTTGGATGCATGTGGCATGTTTTTG
GACTTGAGAGATGATCTCTCTGTCGCGCCCCACGGCCGAGCAGTACCACA
CGAGTTGTGCTTTTATGCGGCACATTTTGTGGCACGGAGGTATATAAAGA
GATGTGGACTTTCGAAACAAAAGCGGCCGGGACGCCCTTCTCCAAACAAA
TTGCAAACAGTCAGGTGCATGGCCCACTGTGGCACGGACGTCTTGCGGCA
CTTGAAGCTCGTGTACGTGCATGGTCGCCATGCTGGTCTCGTTTCCTATC
CTGAGCGTATTTAG
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protein sequence of rna8834

>rna8834-protein ID=rna8834-protein|Name=rna8834|organism=Nannochloropsis gaditana|type=polypeptide|length=90bp
MSSAIPGLIPLSSTNLRNWDNDLLPSPCLQRVVWKGWVLLRYPCRQFHTI
LWQVYRGAYTCTADLNVRHAVQRFIYVVTYVMLLYKRNEN
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mRNA from alignment at KK037250.1:270378..270650+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8834 ID=rna8834|Name=rna8834|organism=Nannochloropsis gaditana|type=mRNA|length=273bp|location=Sequence derived from alignment at KK037250.1:270378..270650+ (Nannochloropsis gaditana)
ATGTCATCCGCTATACCCGGCTTGATACCCTTGTCCAGCACCAACTTGAG
GAATTGGGATAACGACCTGCTTCCTTCACCTTGCCTGCAGCGCGTTGTTT
GGAAGGGCTGGGTCCTGCTCCGGTATCCCTGCCGTCAATTTCACACCATA
CTTTGGCAAGTTTACCGGGGTGCATACACGTGCACTGCGGACTTGAACGT
TCGCCATGCAGTTCAGAGGTTCATTTATGTGGTGACATACGTCATGCTTC
TATACAAAAGGAATGAAAATTAA
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Coding sequence (CDS) from alignment at KK037250.1:270378..270650+

>rna8834 ID=rna8834|Name=rna8834|organism=Nannochloropsis gaditana|type=CDS|length=273bp|location=Sequence derived from alignment at KK037250.1:270378..270650+ (Nannochloropsis gaditana)
ATGTCATCCGCTATACCCGGCTTGATACCCTTGTCCAGCACCAACTTGAG
GAATTGGGATAACGACCTGCTTCCTTCACCTTGCCTGCAGCGCGTTGTTT
GGAAGGGCTGGGTCCTGCTCCGGTATCCCTGCCGTCAATTTCACACCATA
CTTTGGCAAGTTTACCGGGGTGCATACACGTGCACTGCGGACTTGAACGT
TCGCCATGCAGTTCAGAGGTTCATTTATGTGGTGACATACGTCATGCTTC
TATACAAAAGGAATGAAAATTAA
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Synonyms
Publications