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Properties
| Property Name | Value |
|---|
| Product | subtilisin inhibitor |
| Orig transcript id | gnl|cribi|Naga_100159g3.6563.mrna |
| Orig protein id | gnl|cribi|Naga_100159g3.6563 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:260076..262332 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8827 ID=rna8827|Name=rna8827|organism=Nannochloropsis gaditana|type=mRNA|length=2512bp
ATGGCTCACGTGAAAGCAAGAGACAACAAACATTGTAAAGGTAGAAGTCA
ACACACAATTCATACGATTCCATACATTCCTCTCGTCTTTGTTCGCAGAT
TAAGAGAAAAGGACACAAATCAGGCCACTGTCTTATCCGTTTTGCTGCCT
GTGTCAACTTTTTTTCCCCCATCAACGGCAACAGCAATTCTGACACGTAA
GGGTAGGGGCACCAGGAGTAAAGTCGTCGCGAAGGGCATTTTGATGGCTT
CAAAGCGATACTATGCTGCCACATTATTACTCCTAGCACTCTTGCTTTGC
TGCCATGTCACGGCTTTTTTCCCCATTTCGTCGGCGTTGGATTTGAGGCA
CCGCGTGAGCCCCGTTTGCTCATCCGAGATGCTCGAAGCTATCTCACCTA
CGGAGAATTTAGCAAAGGAGGCGATCCAAACGGTGGTTTCTGACAAGACA
AAAAGCAAGGTCCTAGAGCGTCGTACTTTCGCAATTATCTCGCACCCTGA
TTCGGGCAAAACCACTTTGACGGAGAAGCTGCTACTCTACGGAGGAGCCA
TTAACGAAGCGGGCGCTGTTCGCTCTCGGGCATCGCAGCGCAAGACTCAG
TCCGACTTCATGGAGATGGAGAAGCAGCGCGGCATCTCTATCAGTTCCAC
GGTCCTTACATTCGATTACTCAGGCTTTCAAATAAACCTTCTGGACACGC
CGGGCCACGCTGACTTCGGAGAGGACACCTACCGCACCCTCAGCGCTGCC
GACAACGCACTCATGCTCGTGGACGCCGGAAAAGGGCTCGAGGCCCAGAC
CAGGAAGCTATTCGAAGTCTGTCGCCTCCGGGGGCTGCCCATCTATACGT
TCGTCAACAAGATGGACCGACCAGCCAAGGGCCCCGTGGAGCTGGTGGAC
GAGATCGAGAGGGAGATGGGCCTGGAGGTGGTGCCCATGGTCTGGCCGAT
CGGTGACGGGGAGGACTTCAAGGGTGTGTACGACCGGGAGGCCCGGGTCG
TGCACCTGTTCGAGAGGCAGGGCCGCAAGGAGAAGGCCGCCGCCTTGGAC
GCGCTCCCTTTGTCGGACCCGGGCTTGCCCAAGCTGCTGGGCTCGACGCT
CTTCGCGCAGTTGGAGGAGGACGTGGAGCTCTTGGATGCCTTGATGCCAT
CGCTGGATGTGGCGAAGGTGATGCGGGGGGAGCAGACCCCTATGTTTTTC
GGCTCGGCCATGTCCAATTTCGGCGTCGCGCTTTTCCTGAACAAATTTCT
CGCCATCTCCGAGCCTCCCGCGCCGCGAGAGACGACGGCAGGATCGATCG
GGCCCGAGCACCCCGAGTTCACAGGCTTTGTTTTCAAGCTGCAGGCGAAC
CTGAACCCAAAGCACCGGGACCGCGTGGCATACGTGCGGATTTGTTCGGG
CAAATTCGAGAAGGGAATGAAGGTCTCGCACTCCCGCCTCAGGGGCCGGC
AAGTCAACCTCGCCCAGGCGTCCATGCTGTTCGGGCAAGACCGGGAGACC
ATCGAAGAGGCGTATCCTGGGGACGTGGTGGGGCTGAACAACCCCGGTCT
GTTCGCCATCGGCGACTCGATTTACACGGGGCCCAAGACAGTCCGGTTCC
CAGGCATCCCCTCCTTCTCTCCTGAGGTCTTCGCCTACATATTTAATCCA
TCGGCGGGGAAATATAAGAGCTTCAAGAAAGGTATCGACGAACTTCTGGA
AGAGGGGGCGGTGCAGTTGCTGTACGAGAGGAACGACGAGGGGAAGACGT
CGCCGATCCTAGCCGCGGTCGGCCCCCTGCAGCTGGAGGTCGTCTCGTAC
CGAATGAAAGAGGAATATGGCGTCGAGACCCGCCTCGAGCCTCTAACGTT
TACAGCTGCACGATGGTCGGAGGCCACGTGGGAGGACATCGACAGGGCCG
ATGCGGAGGGCTTGATTTTCGGTGCGATGAAGTGTAAGGATCGATGGGGC
AGACCTGTGCTTCTATTCCGGAACGACTGGAAGATCAATCAGGTTGTGGA
TGAGGCACCATATCTAAAGCTGATACCGTGGGCATTTGCGCCTGACGAAG
AAAGATAGAAGCGCAAAAATGATGGATAGATAGGAAGGAACAATGAAGCA
GCTTCTTTTCGGAGGTACCGGTCATATTTTGTTTTGATGCGAATGATAGC
GTGTATAATATGTGAAACACAATCATCCCAACACAAAGAAAAATAAACAC
TTTGGTCTGGGATATATTTGTCAATTTCAGGGTTACGATTACAGGCGAGG
ACTGGAGCAGCTGATGACTGTGTTCTTGGAGGTGAAGAGGCTCTTAAGCC
ATGAAGACGACCCGCAATTCGTCACTTTCGTTTGCTATGTTTGGAGATGT
TGCGATCATAGATCCCCTTATAAAATCTGTATCACGTGCAACGCGACAGA
TTCGGTGAAGATTGCATGGTTTAATCTCCCGAACAACGCCCTTCACGCAA
ATTGCAAACTTACTTGAAGCCATCTTCTTTTAACCGATGGCGCACAATAC
CAAAAACATAGC back to topprotein sequence of rna8827 >rna8827-protein ID=rna8827-protein|Name=rna8827|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
MPYSHFRLYRVLGLLLLCSVACADFPFPSSQGPSSSSSVPATSGSGGVPS
ESMTDKDNKGGGGAFDPKDLAFKMPTQSKDEIFSDKPPKSWPELVGMDGE
DAKKQITADMPGLNVIVLPKNSPCTMDYRLERVRVFVDEEGKVVVAPSQG back to topmRNA from alignment at KK037250.1:260076..262332- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8827 ID=rna8827|Name=rna8827|organism=Nannochloropsis gaditana|type=mRNA|length=2257bp|location=Sequence derived from alignment at KK037250.1:260076..262332- (Nannochloropsis gaditana)
TTCGCGATGCCGCCTAACCTCGTTTCGTGTTCTCTCCCGCAAATTTCGAG
TTGCCATCCAATTTGCGCATGTCGCTCATCACGGCTGGGACAGCCGTTTT
TAAGAGGGGATGATGATGCCCACTAAGCTTTCATACTGCCTCATCCTGCA
CATGCTAGGTGGGGGCTTTCCTTTTGCATGCCGTACTCGCACTTCCGCCT
GTATCGGGTACTCGGACTACTCCTTCTTTGTTCTGTCGCTTGCGCTGATT
TTCCATTTCCAAGCTCGCAAGGCCCCTCTTCTTCATCTTCTGTACCAGGT
AAGCACGAATGTTTGTCACACGACACAATTGGGCCTAACGAGAGGCCGAG
CTCTGGAAGCAAGAGCCCAGGGAAGAGAGTCATTGATAATCACAATTATG
CGCCGGGCGTTATGATGCTTATCTTAGTGTGGAGGAGATGGTGTGGTCTA
TGAAGCTTTACAAAGTAACCTCATTGATAGATTGTGTACTTGGTTGTCGG
AATCCGCCAGTGTAGAAAGTTGGGGGCATATTTTTCATTCGACTCCTCAA
ACGTAGCCCCCTCTCACTGTGTGCCGCATCCCATCGCAGCGACTTCCGGC
AGTGGCGGTGTGCCCTCAGAGAGCATGACCGACAAGGACAACAAGGGAGG
CGGCGGTGCCTTTGACCCGAAGGACCTGGCCTTCAAAATGCCAACCCAGT
CCAAGGACGAAATCTTCTCGGACAAGCCACCTAAAAGTTGGCCTGAGCTC
GTCGGTAAGTCGATCCTGCTATTGCAGAGGACTTTTCGGGCTTGATGGAT
GTGGTCCAACACGTTTGTGATTGTACTCATGCTTGTTGTGCTGAAGGAGA
TTCTCACACGTGCACTGGGACATCATTTTGGTTTTCTCTTGCGAACAGGA
ATGGACGGAGAAGATGCGAAGAAGCAAATCACTGCTGACATGCCGGGCCT
CAACGTGATTGTTCTACCCAAGGTACGTGATCTCGCCTGGAAATAGGATA
AAAACTGGCGCACGAATGGATGGACGCCGAGGACTCGTGCTCCAAAAGCA
TTACTTTGGATGTCGAGGCTAAGCCAACACCTGCCGTTCACGAGTGGTTT
GATTCGTTAAGTCTCTTGAGTATGCTTGATCAGTCATACAAGATGCTTGG
GTGCAATTGTCTTAATCGTGTAGAGCTTAAAGCGGTTCGTTCGACTTGGA
AACGGTCACCCAACATAGAACTCCCCCACAACCCGAGACTACCGGCTAAA
CCGTGTTCGGGTCTTTGTTCACGAAGACAACAAGGTGGCGGTCGTTCCAC
ATCAAGGTTGATGGATGTATTCAACCGCCGTCACCATCTCATTCTTGCCT
CCTTCCACAAAAGTGGTGAGCATATTTTGTTCACGTAATATTTGTCTTGA
TGGCAACTGATGTCATCAACACATTTCACACACATCCAATGACAGAATAG
TCCTTGCACCATGGATTACAGGCTGGAGCGAGTTCGCGTCTTCGTGGACG
AAGAAGGCAAGGTTGTAGTTGCTCCCTCGCAAGGCTAACTCTTGAAGGGA
CATGGAAAACAATCATCGGCTCGAGATTGAGACTCTGTTTATCCACCAAA
AAAAAAAAATTATGTCGACCATTGACTTTGGAGATTTGAGGGAAAGAAAT
TCTCAATGAAGTGCTTTAATGGAGAAGGGAAGGACTTTGCGGAACGAAAG
GGGCATAGATAGACATTGATTGCGAAGTATTTGCGTGCTGCGAATGTGTA
ACTAGACATCAAAGATGGTTGGATGTCGTTGAGATAAGAGAATTCCGGGA
CAGTAAGGCGCCATGAACAAATTTGTAATTTGTGGGTATTTTATTTTTAT
CGGCTATGTTTTTGGTATTGTGCGCCATCGGTTAAAAGAAGATGGCTTCA
AGTAAGTTTGCAATTTGCGTGAAGGGCGTTGTTCGGGAGATTAAACCATG
CAATCTTCACCGAATCTGTCGCGTTGCACGTGATACAGATTTTATAAGGG
GATCTATGATCGCAACATCTCCAAACATAGCAAACGAAAGTGACGAATTG
CGGGTCGTCTTCATGGCTTAAGAGCCTCTTCACCTCCAAGAACACAGTCA
TCAGCTGCTCCAGTCCTCGCCTGTAATCGTAACCCTGAAATTGACAAATA
TATCCCAGACCAAAGTGTTTATTTTTCTTTGTGTTGGGATGATTGTGTTT
CACATATTATACACGCTATCATTCGCATCAAAACAAAATATGACCGGTAC
CTCCGAA back to topCoding sequence (CDS) from alignment at KK037250.1:260076..262332- >rna8827 ID=rna8827|Name=rna8827|organism=Nannochloropsis gaditana|type=CDS|length=1812bp|location=Sequence derived from alignment at KK037250.1:260076..262332- (Nannochloropsis gaditana)
AATAGTCCTTGCACCATGGATTACAGGCTGGAGCGAGTTCGCGTCTTCGT
GGACGAAGAAGGCAAGGTTGTAGTTGCTCCCTCGCAAGGCTAAGAATGGA
CGGAGAAGATGCGAAGAAGCAAATCACTGCTGACATGCCGGGCCTCAACG
TGATTGTTCTACCCAAGCGACTTCCGGCAGTGGCGGTGTGCCCTCAGAGA
GCATGACCGACAAGGACAACAAGGGAGGCGGCGGTGCCTTTGACCCGAAG
GACCTGGCCTTCAAAATGCCAACCCAGTCCAAGGACGAAATCTTCTCGGA
CAAGCCACCTAAAAGTTGGCCTGAGCTCGTCGATGCCGTACTCGCACTTC
CGCCTGTATCGGGTACTCGGACTACTCCTTCTTTGTTCTGTCGCTTGCGC
TGATTTTCCATTTCCAAGCTCGCAAGGCCCCTCTTCTTCATCTTCTGTAC
CAGAATAGTCCTTGCACCATGGATTACAGGCTGGAGCGAGTTCGCGTCTT
CGTGGACGAAGAAGGCAAGGTTGTAGTTGCTCCCTCGCAAGGCTAAGAAT
GGACGGAGAAGATGCGAAGAAGCAAATCACTGCTGACATGCCGGGCCTCA
ACGTGATTGTTCTACCCAAGCGACTTCCGGCAGTGGCGGTGTGCCCTCAG
AGAGCATGACCGACAAGGACAACAAGGGAGGCGGCGGTGCCTTTGACCCG
AAGGACCTGGCCTTCAAAATGCCAACCCAGTCCAAGGACGAAATCTTCTC
GGACAAGCCACCTAAAAGTTGGCCTGAGCTCGTCGATGCCGTACTCGCAC
TTCCGCCTGTATCGGGTACTCGGACTACTCCTTCTTTGTTCTGTCGCTTG
CGCTGATTTTCCATTTCCAAGCTCGCAAGGCCCCTCTTCTTCATCTTCTG
TACCAGAATAGTCCTTGCACCATGGATTACAGGCTGGAGCGAGTTCGCGT
CTTCGTGGACGAAGAAGGCAAGGTTGTAGTTGCTCCCTCGCAAGGCTAAG
AATGGACGGAGAAGATGCGAAGAAGCAAATCACTGCTGACATGCCGGGCC
TCAACGTGATTGTTCTACCCAAGCGACTTCCGGCAGTGGCGGTGTGCCCT
CAGAGAGCATGACCGACAAGGACAACAAGGGAGGCGGCGGTGCCTTTGAC
CCGAAGGACCTGGCCTTCAAAATGCCAACCCAGTCCAAGGACGAAATCTT
CTCGGACAAGCCACCTAAAAGTTGGCCTGAGCTCGTCGATGCCGTACTCG
CACTTCCGCCTGTATCGGGTACTCGGACTACTCCTTCTTTGTTCTGTCGC
TTGCGCTGATTTTCCATTTCCAAGCTCGCAAGGCCCCTCTTCTTCATCTT
CTGTACCAGAATAGTCCTTGCACCATGGATTACAGGCTGGAGCGAGTTCG
CGTCTTCGTGGACGAAGAAGGCAAGGTTGTAGTTGCTCCCTCGCAAGGCT
AAGAATGGACGGAGAAGATGCGAAGAAGCAAATCACTGCTGACATGCCGG
GCCTCAACGTGATTGTTCTACCCAAGCGACTTCCGGCAGTGGCGGTGTGC
CCTCAGAGAGCATGACCGACAAGGACAACAAGGGAGGCGGCGGTGCCTTT
GACCCGAAGGACCTGGCCTTCAAAATGCCAACCCAGTCCAAGGACGAAAT
CTTCTCGGACAAGCCACCTAAAAGTTGGCCTGAGCTCGTCGATGCCGTAC
TCGCACTTCCGCCTGTATCGGGTACTCGGACTACTCCTTCTTTGTTCTGT
CGCTTGCGCTGATTTTCCATTTCCAAGCTCGCAAGGCCCCTCTTCTTCAT
CTTCTGTACCAG back to top
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