rna8815, rna8815 (mRNA) Nannochloropsis gaditana

Overview
Namerna8815
Unique Namerna8815
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length917
Alignment locationKK037250.1:231492..232889 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100231g1.10119.mrna
Orig protein idgnl|cribi|Naga_100231g1.10119
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:231492..232889 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100231g1gene8546Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21888.1cds8785Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8815rna8815-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8815 ID=rna8815|Name=rna8815|organism=Nannochloropsis gaditana|type=mRNA|length=917bp
TACGCTGCCCTGCATCAAATATGTGCCATATGACCAAGAAAAGATTGGGA
TGATGTTGGTTTCGGGAGCATCGGTGGTACACGGGTGGTGAGACAGACTA
GGAGCGCGGGCGACAGCGAGGTTGCAGCTCCGCTTCTCCAGTACTTTTAC
GGAATCCCCCCAACCTCTTTCACCCACGACCACAGAGCGATACCAGAAAC
GCACAATTGTCCAGCTCCAATCGCATCAGGGTAGAATCTTGACACGTGGC
TCGTCCAAATGGCTATCACGCTGGTGGAGCCGCCATCTCCTTACTTTCTA
CCCCTCCTGATCTTCATTGTCCTGTTTGAGGTTGCCCTGCTTTTGGGCAA
GAGGCAACAATGCAAGTCCCTTACACTTGAGATAAAATCTCTAACTCTTC
GCAAGTTTGAGCTCGCGTTGGCTATGAAAAGCCTGGGCATTCCCACAGAT
TTTGTAAAAAAGAGCAAGCTGGAGCGAGAGCTCATTCAGGTAGAGAAAGA
CCTGGCCCCTCGGAGGGAGCAGGTCCTTGCTCGTGCCAAGGATTACGATG
CACTGGCCAGTAGACTACAATACGGCGTATATGCCTTGCTGGTGATCGTC
TTTTGGCGCACGCGTCTGGTCGTCATGTCGCCGGCAGCGACCTGGCCCTT
GTCCTCTTTCTTCGGCTTCCCGCGACTGGGGCTCGGAGCGGTGGGTGTAT
CGGCGGTGATCTCCATGGCCAAGGCTGTGATCAAGCCTTTCACGCCCTTG
CTGTCATCTGTATAGGAAGGAAAAGTCAGCACAATAACATGAACGGGGCA
AGCCCGTCAGAAAGCATGAAGGAGTACAAGTAAAATCTCAGCCAACCGGC
GCCTTTCGCGACATGACTTTGAATTTTTGGCAAGCTAATCTGTAGAATTC
TTTATCGCTTTTCTCCT
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protein sequence of rna8815

>rna8815-protein ID=rna8815-protein|Name=rna8815|organism=Nannochloropsis gaditana|type=polypeptide|length=427bp
ALPPRTPPFLAPLQPSVHLLSVPAPSVLVWPPPPSTRPENAWEEAVGAGT
QTSAPSTGPAAEEEKLLVALRALWELELVDEAVKLTGHLEALAALPETRA
RYEKAKAEDELEEAILIREEVRRLAKMVCDEEQVGVWKNAVVGESKKSGD
GKQASQQGGAVALKQLQARVAAVDAGRGEAFAATFVIGHPSLVEQAARGR
EGRREAVRRSRQARRCCALLEGMDASGRWVAHPGHWLAVLEAAQKHVREA
VKTCNQVVAATAEKENGLVREVLTSTRVLGMVEAAFEMVRVARLVLASAS
DALLGLVLAEEEAVEACMRDLGVALDRMGLTAYFASRLPPSTEAMRLVVA
DCVDSDAGEIQPSEHCNLCLLPLACASQLGVTVTYNSEHAYFCVCLNFWI
NAVSRDLPRPQVTAREATESEGVCGRA
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mRNA from alignment at KK037250.1:231492..232889-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8815 ID=rna8815|Name=rna8815|organism=Nannochloropsis gaditana|type=mRNA|length=1398bp|location=Sequence derived from alignment at KK037250.1:231492..232889- (Nannochloropsis gaditana)
GCTCTCCCCCCCCGCACCCCCCCGTTCCTCGCTCCTCTCCAGCCATCAGT CCACCTCCTCTCTGTTCCTGCCCCCTCCGTCCTCGTGTGGCCCCCGCCGC CCTCCACGCGTCCTGAGAATGCCTGGGAGGAGGCTGTCGGCGCCGGGACG CAGACGTCGGCCCCGTCCACCGGGCCTGCGGCGGAAGAAGAAAAACTCTT GGTTGCGCTTCGAGCCTTGTGGGAGCTGGAGTTAGTGGACGAAGCGGTCA AATTGACAGGGCACCTGGAGGCCCTGGCTGCTCTACCTGAGACTCGGGCC CGCTACGAGAAGGCGAAGGCCGAAGATGAGCTGGAGGAGGCGATATTGAT TCGAGAGGAGGTGAGGAGGCTGGCGAAGATGGTCTGTGACGAGGAGCAGG TCGGAGTATGGAAGAATGCCGTCGTGGGAGAGAGCAAGAAAAGCGGAGAT GGAAAGCAAGCGAGCCAACAGGGAGGTGCAGTCGCCTTAAAGCAGCTGCA AGCACGAGTTGCGGCAGTGGACGCGGGGAGAGGGGAAGCCTTCGCGGCAA CCTTCGTCATTGGCCATCCCTCCTTAGTCGAGCAGGCAGCCCGTGGGCGG GAGGGACGACGGGAAGCGGTTCGTCGAAGCCGACAAGCGCGGCGATGCTG CGCCCTATTGGAGGGGATGGACGCGTCCGGGCGCTGGGTAGCCCACCCGG GGCACTGGCTAGCCGTCCTGGAGGCGGCGCAGAAGCACGTCCGCGAGGCA GTAAAGACCTGCAACCAGGTGGTGGCTGCGACGGCTGAGAAGGAGAACGG TCTCGTGCGAGAAGTCCTGACATCGACGCGCGTCCTGGGCATGGTGGAGG CGGCTTTCGAGATGGTGCGAGTGGCCCGCCTCGTCCTGGCCTCTGCCTCG GATGCCTTGCTGGGTCTGGTGCTGGCGGAGGAGGAAGCGGTGGAGGCCTG CATGCGGGACCTGGGGGTCGCCCTGGATCGCATGGGCCTGACGGCGTATT TCGCGTCCCGCCTGCCTCCCAGCACCGAGGCCATGCGGCTGGTGGTGGCC GACTGCGTGGACTCCGACGCCGGAGAGATCCAGCCCTCGGAACACTGCAA CCTGTGCCTCCTGCCCCTAGCTTGTGCCAGTCAACTGGGCGTCACTGTCA CATATAACTCCGAGCATGCATACTTCTGCGTGTGTCTGAACTTCTGGATC AACGCCGTGTCAAGGGACCTCCCGCGGCCTCAAGTGACGGCGAGGGAGGC CACCGAGTCTGAGGGGGTTTGTGGACGAGCGTGAGGACTGAGGCCCTGCA CTCCCACACAAAGATTTCAGTCATGCACACTAGGAGAAAAGCGATAAAGA ATTCTACAGATTAGCTTGCCAAAAATTCAAAGTCATGTCGCGAAAGGC
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Coding sequence (CDS) from alignment at KK037250.1:231492..232889-

>rna8815 ID=rna8815|Name=rna8815|organism=Nannochloropsis gaditana|type=CDS|length=1284bp|location=Sequence derived from alignment at KK037250.1:231492..232889- (Nannochloropsis gaditana)
GCTCTCCCCCCCCGCACCCCCCCGTTCCTCGCTCCTCTCCAGCCATCAGT
CCACCTCCTCTCTGTTCCTGCCCCCTCCGTCCTCGTGTGGCCCCCGCCGC
CCTCCACGCGTCCTGAGAATGCCTGGGAGGAGGCTGTCGGCGCCGGGACG
CAGACGTCGGCCCCGTCCACCGGGCCTGCGGCGGAAGAAGAAAAACTCTT
GGTTGCGCTTCGAGCCTTGTGGGAGCTGGAGTTAGTGGACGAAGCGGTCA
AATTGACAGGGCACCTGGAGGCCCTGGCTGCTCTACCTGAGACTCGGGCC
CGCTACGAGAAGGCGAAGGCCGAAGATGAGCTGGAGGAGGCGATATTGAT
TCGAGAGGAGGTGAGGAGGCTGGCGAAGATGGTCTGTGACGAGGAGCAGG
TCGGAGTATGGAAGAATGCCGTCGTGGGAGAGAGCAAGAAAAGCGGAGAT
GGAAAGCAAGCGAGCCAACAGGGAGGTGCAGTCGCCTTAAAGCAGCTGCA
AGCACGAGTTGCGGCAGTGGACGCGGGGAGAGGGGAAGCCTTCGCGGCAA
CCTTCGTCATTGGCCATCCCTCCTTAGTCGAGCAGGCAGCCCGTGGGCGG
GAGGGACGACGGGAAGCGGTTCGTCGAAGCCGACAAGCGCGGCGATGCTG
CGCCCTATTGGAGGGGATGGACGCGTCCGGGCGCTGGGTAGCCCACCCGG
GGCACTGGCTAGCCGTCCTGGAGGCGGCGCAGAAGCACGTCCGCGAGGCA
GTAAAGACCTGCAACCAGGTGGTGGCTGCGACGGCTGAGAAGGAGAACGG
TCTCGTGCGAGAAGTCCTGACATCGACGCGCGTCCTGGGCATGGTGGAGG
CGGCTTTCGAGATGGTGCGAGTGGCCCGCCTCGTCCTGGCCTCTGCCTCG
GATGCCTTGCTGGGTCTGGTGCTGGCGGAGGAGGAAGCGGTGGAGGCCTG
CATGCGGGACCTGGGGGTCGCCCTGGATCGCATGGGCCTGACGGCGTATT
TCGCGTCCCGCCTGCCTCCCAGCACCGAGGCCATGCGGCTGGTGGTGGCC
GACTGCGTGGACTCCGACGCCGGAGAGATCCAGCCCTCGGAACACTGCAA
CCTGTGCCTCCTGCCCCTAGCTTGTGCCAGTCAACTGGGCGTCACTGTCA
CATATAACTCCGAGCATGCATACTTCTGCGTGTGTCTGAACTTCTGGATC
AACGCCGTGTCAAGGGACCTCCCGCGGCCTCAAGTGACGGCGAGGGAGGC
CACCGAGTCTGAGGGGGTTTGTGGACGAGCGTGA
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Synonyms
Publications