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Properties
| Property Name | Value |
|---|
| Product | protein cereblon |
| Orig transcript id | gnl|cribi|Naga_100070g23.4228.mrna |
| Orig protein id | gnl|cribi|Naga_100070g23.4228 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:192108..194014 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8797 ID=rna8797|Name=rna8797|organism=Nannochloropsis gaditana|type=mRNA|length=1844bp
ACTGCATCCTCCATTAAAGAGCGCCTTCGAGCATTAAGGATGCCGAGGTA
AGCTGGTTGTCCGCGTCGTTGAGAAAAGGCTAAAAGAAGGAGGAGACGTA
CATGGTGCAGCTCCCAGACGCGCAGAGGAAGATTTTCTCCGGGAAAGAGC
ACTACATGTGGCAAAACTAATATTGGCAGTTCCACTTCCGTATTCGATGG
TAATAACTGGGATCTGGCCAAGCTTTCCATGTTCGCGACACCAAAACATG
CTAGAGTGACAACCATTTCGAAAATTGAGGAGGGAGGTTGAGTTTCCAAA
CCACAAGCCGGAGGCATGGGGCATAGATGTGGAGCCCCTCGCACCAAACC
GTGTAGACACTGTCCATCCATGAAGGTTCAGAGGCAGGCCGTGGAATTGC
CTACGGCCAGAGACTGCGATTGACCACACCTCTGACGTCGGAGCATCGTC
CGCGCAACGATACGCATGCACCAGGCTGGAGAGGCAACTGGGGAGGTCGG
ATCGTGAATCCCGAAGTGTGAGGTATTAAATAGCAGGAATATGTGTTTCT
TTCATTCTACTCCTTCCTCTTTCATTCTACTCCTTCACACAGGCCTGATT
GGGTGGGTGAAGTTGCATGTGGGAGCCTTTACTTGTCTTCTTAATGTTTT
GTAGGAGCTCCCAGGCCTTCACCAACAGGATGCATTCGACCCGTCGTAGC
CCTCTGGGCATTGTTCACACTTTTAGTGGGATGGACATCGATCGAAGCCG
AGTCGAAGCAGAGCTTAAGGAGGCCAGTGCCTTTCAAAACGCCTTGAGAA
GTCATGGAGCGGCATTTGCTTTGTTTCATGGAACATCAGCCCTGGTGATC
ACCGATTCTCCAATGAAATTAGCGTTTCACGATGCTGAAAAGCTTCAAAC
TTTGTATGAGATATCTCTCCAACAATTTGAGCCCTCGTTAACTTGCATCA
GCAATGATGTTGGAAATTCCATTCCTATATATCCATGTATTGCGCTGGGT
GCCTCCGCATCTGGGTGGGCGTTCGCTGTAGACGTATCAAATCGGTCGAG
AAACGAATTTGAGGTCAAGAACGAGGCAGAGGGTAATCTTCGCTTTGAGC
CGGTGCGAGCGCTGCTGGCTACATTGAATCAAAGAGATATCGCGATGGCA
GGGCTAGGGGCATCTACATTAGCTTGGCATCGGCAGCATCAGTTCTGTGG
ACTGTGTGGAAGTCGTATGGTGGCTGTCGAGGCTGGCGGGCGACGGGCGT
GCACGAGCGAGACGTGTCGCAACCGTGCCTACCCTCGCGTGGATCCTGTT
GTAATTGCGCTCGTTCAGGACCCCGTCCGAGACAAGATATTGCTGGGTCG
TCAGAGTGTATACCGCCCTATGATGTACAGTTGTTTGGCTGGATATGTGG
GTCCTTGCGAGAGCTTGGAAGAGGCGGTGCGCCGAGAAGTGAAGGAAGAG
TCCGGAATCGATGTGGGAGAGATGAGTTACCATAGCTCTCAACCATGGCC
GATCGGTCGTGGGGCCTCGTGTCAGATGATGGTAGGCTTCACAGCCACCG
CAACGAGCACCGAGATCCATATCGACACAAACGAACTAGAGGACTGCAGA
TGGTTTTCCCGTGCCGAGGTTGCGGAGGCAGAGGAACTGGTTGTGGCGAG
AAGGCCAGGTCCCTCTGATGAGAGCTCGAAAACGTTAAGTATCCCAGGGC
CTTACGCAATTGCGCATCATCTTATTAAGAACTGGCTCTCCACGACAAAA
GCACCGCTCCAAGCGTCCGGGAGAAATAAATTATAAGAGTCATCAATTAC
ATAATCCTCTCACTCTAAAGAGTGACATTCTTTATGGCTAGCAT back to topprotein sequence of rna8797 >rna8797-protein ID=rna8797-protein|Name=rna8797|organism=Nannochloropsis gaditana|type=polypeptide|length=473bp
MDGQCLHGLVRGAPHLCPMPPACGLETQPPSSIFEMVVTLACFGVANMES
LARSQLLPSNTEVELPILVLPHVVLFPGENLPLRVWELHHVRLLLLLAFS
QRRGQPAYLGILNARRRSLMEDAVVGCTCEMFEVESDWDGSSPLTAKAKG
RQRFRVLDAARGGNMEMRQGIPHVRVLILSDECVSAYPRLPQWQRSKLHQ
CTYWPTTIMGLLSPACLLGKVKQILHSIESWQGVRCATGFELCRIAGFSS
DCLDGEERGREGADEEEGAPVEMRDAVSLSFRLAASLPLDDITRQRLLAM
DSVVYRLQNIILLLKNTAESKLCCAHCEVALVGKGALFSVPGAEGTVGAY
SNPAGVVHQMLTVREVLDEEENVALEGPIETEGSWFEGYAWTIAYCRRCS
LHLGWLFTCCEVNREESTNLPRFWGIRRQALVDELQCNAQRVPDSRQDGA
RPQIDDGEGIVAEEEEMLIRMVE back to topmRNA from alignment at KK037250.1:192108..194014+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8797 ID=rna8797|Name=rna8797|organism=Nannochloropsis gaditana|type=mRNA|length=1907bp|location=Sequence derived from alignment at KK037250.1:192108..194014+ (Nannochloropsis gaditana)
AATGAAAGAAACACATATTCCTGCTATTTAATACCTCACACTTCGGGATT
CACGATCCGACCTCCCCAGTTGCCTCTCCAGCCTGGTGCATGCGTATCGT
TGCGCGGACGATGCTCCGACGTCAGAGGTGTGGTCAATCGCAGTCTCTGG
CCGTAGGCAATTCCACGGCCTGCCTCTGAACCTTCATGGATGGACAGTGT
CTACACGGTTTGGTGCGAGGGGCTCCACATCTATGCCCCATGCCTCCGGC
TTGTGGTTTGGAAactcaacctccctcctcaatTTTCGAAATGGTTGTCA
CTCTAGCATGTTTTGGTGTCGCGAACATGGAAAGCTTGGCCAGATCCCAG
TTATTACCATCGAATACGGAAGTGGAACTGCCAATATTAGTTTTGCCACA
TGTAGTGCTCTTTCCCGGAGAAAATCTTCCTCTGCGCGTCTGGGAGCTGC
ACCATGtacgtctcctccttcttttagCCTTTTCTCAACGACGCGGACAA
CCAGCTTACCTCGGCATCCTTAATGCTCGAAGGCGCTCTTTAATGGAGGA
TGCAGTAGTGGGTTGCACGTGTGAGATGTTCGAGGTCGAATCAGATTGGG
ACGGGTCCTCGCCGCTCACGGCAAAGGCCAAGGGACGTCAACGATTTAGA
GTACTGGACgctgcgaggggggggaacatGGAAATGCGCCAAGGCATTCC
GCATGTGCGTGTTCTTATTCTTTCAGACGAATGTGTAAGTGCATATCCCA
GGTTGCCTCAGTGGCAAAGGAGCAAGTTGCATCAATGTACCTATTGGCCC
ACTACTATAATGGGTCTACTGTCTCCCGCTTGCCTGCTTGGAAAAGTCAA
ACAAATACTTCATTCTATTGAGTCTTGGCAGGGTGTCCGATGTGCTACAG
GCTTTGAACTCTGTCGTATTGCCGGATTCTCTAGTGACTGCttggatgga
gaggagcggGGTCGCGAGGGGGctgacgaagaagagggagctcCAGTGGA
AATGAGGGATGCGGTGTCTTTGTCATTTCGCTTGGCAGCTAGTTTGCCAC
TTGATGACATTACACGTCAGCGTCTCTTAGCGATGGACTCAGTGGTTTAT
CGCCTTCAAAATATCATCCTATTGCTGAAGAATACGGCAGAGAGCAAGCT
CTGCTGCGCTCATTGCGAGGTAGCCTTAGTTGGCAAAGGAGCGCTTTTCA
GTGTTCCTGGCGCAGAGGGGACTGTTGGGGCCTATAGCAATCCGGCAGGT
GTTGTGCATCAGATGCTTACGGTCAGAGAGGTGctcgatgaagaggagaa
cGTAGCTTTGGAGGGACCGATTGAAACGGAGGGCTCATGGTTCGAAGGCT
ACGCATGGACGATTGCTTACTGTAGGCGCTGCAGCCTACATCTGGGATGG
CTGTTCACTTGCTGCGAAGTAAATAGAGAGGAATCGACAAATTTGCCGCG
GTTTTGGGGAATTAGGCGTCAGGCCTTGGTGGATGAGCTGCAGTGCAATG
CTCAGCGCGTCCCCGATAGCCGTCAAGATGGAGCACGGCCTCAGATTGAC
GATGGCGAGGGGATAgtagcggaggaagaagaaatgctAATTCGCATGGT
TGAGTAAAGGGGAGATGTGTCCGGTCACGAAATGGAGGTTGGTGAAGGCG
CAATCGAACATGCCGGAGAACGTGTGTACGATAGTATTTCGAATGTACAA
GGGGGGTGTCGCTGATTGATCACATCAACCTCAATATGAAGACGGAACAT
GTAAAAGTAGAGAGATTATATAACAATTTTTTAAGCGTATACAAGGTACG
AGGTAAAAGTACTCTGACGCCAGATATCTACTTCTTCGACCTCGCTAGGG
CAAATACTCCTTGCGCGGCTTGATAATTCTTTTTACCATGCCGTGAAGAT
GCAGACG back to topCoding sequence (CDS) from alignment at KK037250.1:192108..194014+ >rna8797 ID=rna8797|Name=rna8797|organism=Nannochloropsis gaditana|type=CDS|length=1422bp|location=Sequence derived from alignment at KK037250.1:192108..194014+ (Nannochloropsis gaditana)
ATGGATGGACAGTGTCTACACGGTTTGGTGCGAGGGGCTCCACATCTATG
CCCCATGCCTCCGGCTTGTGGTTTGGAAactcaacctccctcctcaatTT
TCGAAATGGTTGTCACTCTAGCATGTTTTGGTGTCGCGAACATGGAAAGC
TTGGCCAGATCCCAGTTATTACCATCGAATACGGAAGTGGAACTGCCAAT
ATTAGTTTTGCCACATGTAGTGCTCTTTCCCGGAGAAAATCTTCCTCTGC
GCGTCTGGGAGCTGCACCATGtacgtctcctccttcttttagCCTTTTCT
CAACGACGCGGACAACCAGCTTACCTCGGCATCCTTAATGCTCGAAGGCG
CTCTTTAATGGAGGATGCAGTAGTGGGTTGCACGTGTGAGATGTTCGAGG
TCGAATCAGATTGGGACGGGTCCTCGCCGCTCACGGCAAAGGCCAAGGGA
CGTCAACGATTTAGAGTACTGGACgctgcgaggggggggaacatGGAAAT
GCGCCAAGGCATTCCGCATGTGCGTGTTCTTATTCTTTCAGACGAATGTG
TAAGTGCATATCCCAGGTTGCCTCAGTGGCAAAGGAGCAAGTTGCATCAA
TGTACCTATTGGCCCACTACTATAATGGGTCTACTGTCTCCCGCTTGCCT
GCTTGGAAAAGTCAAACAAATACTTCATTCTATTGAGTCTTGGCAGGGTG
TCCGATGTGCTACAGGCTTTGAACTCTGTCGTATTGCCGGATTCTCTAGT
GACTGCttggatggagaggagcggGGTCGCGAGGGGGctgacgaagaaga
gggagctcCAGTGGAAATGAGGGATGCGGTGTCTTTGTCATTTCGCTTGG
CAGCTAGTTTGCCACTTGATGACATTACACGTCAGCGTCTCTTAGCGATG
GACTCAGTGGTTTATCGCCTTCAAAATATCATCCTATTGCTGAAGAATAC
GGCAGAGAGCAAGCTCTGCTGCGCTCATTGCGAGGTAGCCTTAGTTGGCA
AAGGAGCGCTTTTCAGTGTTCCTGGCGCAGAGGGGACTGTTGGGGCCTAT
AGCAATCCGGCAGGTGTTGTGCATCAGATGCTTACGGTCAGAGAGGTGct
cgatgaagaggagaacGTAGCTTTGGAGGGACCGATTGAAACGGAGGGCT
CATGGTTCGAAGGCTACGCATGGACGATTGCTTACTGTAGGCGCTGCAGC
CTACATCTGGGATGGCTGTTCACTTGCTGCGAAGTAAATAGAGAGGAATC
GACAAATTTGCCGCGGTTTTGGGGAATTAGGCGTCAGGCCTTGGTGGATG
AGCTGCAGTGCAATGCTCAGCGCGTCCCCGATAGCCGTCAAGATGGAGCA
CGGCCTCAGATTGACGATGGCGAGGGGATAgtagcggaggaagaagaaat
gctAATTCGCATGGTTGAGTAA back to top
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