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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100070g4.4235.mrna |
| Orig protein id | gnl|cribi|Naga_100070g4.4235 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:141650..143640 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8779 ID=rna8779|Name=rna8779|organism=Nannochloropsis gaditana|type=mRNA|length=1930bp
TTGGACTGCGCGGGTGTCTTTCATGCGTCCGGGGCTCCTGGCTCTCATGC
TCGATCCATCCGTGCGTGCCTTCTGCGTTGATCGCACACTGGGGGTGCGA
TCAGGCGAAGGGGGATACCTTATTGGGTTCGAAAGCAAAGTGCCCTGCTT
CGTGTGGCTCGGTTGGCTAGGGGAGGGCGACATCTTACCCCATTGCTGCT
GCCACTGCCAAATAAGATTGTATGGGGTTACAACGATTCTTTGGCAAGCT
GTGAATAGGTGCTCACTTCTTCTTTTTTCCTCTTTTGGTTTTGCCAAGAA
AAATATATGGATGTAAAGTGTGTTTACATTGCGCGGTCAATTATGTCCGC
AGGACGCACGAGTATCTTGCTATTTCTCACGCTCCAGGCTACTCGTTGAT
AGCCCTCACAGGATCCAAATCATGCTGTTGCAAAAAGGAGTACTGGTGAG
CTGTTTGCTCACTTGCGCAGTTGCCTATGTACCGCCCATGCGTGGTCCTC
GTAGTACGGCAGTATCAAAGTCAGTCAAGTTGCGTCTCTATGCCTCGGGG
CCCGAGGCTCCTGGAGGCTCGCAACTGGTGCCGGAGGACGATGAGGAGAT
GACGGAGGGATTCACTGAGATAGACGGCGTCGTGTTCGAGGGCGATTTTG
AGGATGACTCGGTCAAGCCTTCGTTGACATCCTTGCTAGAGGATGTAGCC
GATGATGGGAGCGAGGCATTCAAGTTGGATTCCGACGACTCCTTCTTCTC
CATCCCCGACTACGTGCCCTCCGAGCTCCCGGACCTGGCAGCTCTCGGAT
CAGGACTGGAGAGCAAGCGGGACATGATGAATGAGTTCGTTGAGGGCGGA
GAATTCGACCCGAATGACGAGAAAATGTATCGGCTGCTTGGCTTGGACGC
GCTCGACGAGAAGAAGACCCGCAAGAGTCCCGAGGACTTCACCCTTCCTG
GTGGCTACCTTCTCGAGCAGGCTCGCCTTGAGGTCGCACAGAAATACCAG
AAGCATGACAAGGATGTGGGCTCATCTGCTGTACAGGTGGCACAATTCAC
ACAGACGATCAGCTACTTGACCAAGCACGTGCAAGTGAATCCCCGAGACT
ACTCCGCCCGACGGGGCCTGATTCGGGCCGTGAACATACGCCGGAAGCTC
TTGAACTACATCTCGAAGAGGAACAAGCCATTTGCACTCAAGCTGGCTGC
TGAACTGGGAATCCGCTTCCGCCCACCTGATGGCGCGCGATCTAAGTTTG
AAATGTATCGTTTCTACAAAAATACGAAGAGCAAGAAGGCCAAGAATATG
CAGTCCATTGCGGACCTGAAGGCAGCTGCCGAGGCTCAGGGTGTGAATGC
ATGAGCAGGAGGTCAGCTGTCATATCCATAAGAAGGACGTCGATACTTCT
ATCACATAACGCGCGTTGTGAAACCATGGTCTCACACGCATACCATATCA
GGTCCTGAGTATTGATTATATGTGAGTGTTCTTCTGTGAGGGCTCTATGC
GTGGCGAGACTATTCGAATGCAAGCTGACGGCAAAAGTCGAGAGAGAGGC
ATGCATGCTACCACCCTCGTCAACACATTCCTCTTGACATGTCATACATA
CACTCATGGGGTTTTTTGCAAACTTCTTGGACGAGGGAAAAAAGAGCGGC
AAGTGGATGACCAGGAGTCCCTGCTGCGCAGTGTGCAAGCAGACACGAAG
AGATTGAAGAAAAAGCAATTAAGCTCACTATTTCATATGTTGTATTGATT
TTTTGGGGCTAATGAATTTCTCGGTCTGAATGGACTAGCAATTATTTCAA
ACATCATCCTCCATTGTTGATTTAGAGCTTGGAGAAGACGAGGAAGTTGA
GTTTGAGAGGCAGCATGAAGAACAGTCGCAGGACGAAGACGTGAATGATG
AAGAAGAGATGGAACGCGCAGTAGAGAGGG back to topprotein sequence of rna8779 >rna8779-protein ID=rna8779-protein|Name=rna8779|organism=Nannochloropsis gaditana|type=polypeptide|length=538bp
MYSTTIMCERKHLAPGRTSLHPLRRHLHRSFDRKKIILDYQKDIAMKIYD
ELSSVVLMATSKPTVLPSDYAVIPIPIPFYPSSCTKLHVQEESGNAQRQH
QMSRSFPPLRNSSFCPTYGPKHSRQAQTTCTPVRVRQRSCLPAELTKSLQ
CFPKPKVPCLGASVRTITTRLTSKDMIKKLSRGGDRKRRRASAIRCHPDP
VPSSECQHAGNFFDTLSHFLLQSEEIQRDRCKFYRADAEKSPSVQSNGKA
DTSCKGVSGSVETISAPEFEAKKSYTYSARERCSLNVSVALKHCEVRELA
TGPGNQVVEISIEGLDPSPRHEAPYEISPCFNSRVRMKHSHHSDVYASSL
HSSGETAAVISKPDAASTERSNDLRSSCIQPSTFVAFPDSISDDLLPTHH
SNSNCYSCEDEHNAKVSTNIIDLSSLRTQHLSHVNFTDSRREKSSLSPGL
KGDKNTVWQAGGTTEPISVKRDSLSSFAQRENSEDGYMTESSGLSLSTAR
SISSSSFTSSSCDCSSCCLSNSTSSSSPSSKSTMEDDV back to topmRNA from alignment at KK037250.1:141650..143640- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8779 ID=rna8779|Name=rna8779|organism=Nannochloropsis gaditana|type=mRNA|length=1991bp|location=Sequence derived from alignment at KK037250.1:141650..143640- (Nannochloropsis gaditana)
ATGTATTCAACGACGATCATGTGCGAGCGCAAACACTTGGCACCGGGACG
AACAAGCCTTCACCCGTTAAGGCGTCACCTTCATAGAAGCTTTGATCGCA
AAAAAATAATTTTAGACTACCAAAAAGATATTGCAATGAAAATTTACGAT
GAGCTTTGTAAATGTATCGTTGCGTCTTCTCCCGACCGATCCCTGAGGCT
CTGGAGGGATCGGAACGCGAAGGGAGAAAACACCGGCGGCCGCGGCTTTT
CGCTAGCAACTTTTGCAATGCGCGGGCCCAAGCCCAATATACAAACCAAA
CATACCTTTCGGCTGTCCCACACTTTTCCTATCTGTATAATCTTTCAATC
TCATGGATTTTTGAAAGCTAACGAGAAGTAAGGGAATTTTTCGTAGCCAC
ATTGTGATGCAACTTGTTTTGCACTTTTCTACTGACTCGTTGGACATGTG
TTTGGCTGCCTTTCCACAAATTTACCCAAACTGGACAGGTACCCATTCAA
GTCTTTTCCGATCCATAAAGGTCATATTTAGCATCAGTAGTGCTCATGGC
GACCTCAAAACCTACTGTTCTGCCGTCAGACTACGCTGTAATACCAATTC
CTATTCCATTCTACCCATCATCATGCACAAAACTTCACGTACAAGAGGAA
TCGGGAAACGCGCAACGACAGCATCAAATGTCGCGATCTTTCCCTCCTCT
CCGTAACTCTTCCTTCTGCCCGACATATGGCCCGAAACACTCCCGACAGG
CACAAACGACATGTACGCCTGTAAGGGTCCGACAGCGATCCTGCCTCCCT
GCGGAACTGACAAAGTCGTTGCAATGCTTTCCTAAACCAAAAGTCCCTTG
CCTGGGCGCTTCTGTCCGAACTATAACTACTCGTTTAACGAGTAAGGACA
TGATCAAGAAATTAAGCAGGGGTGGTGATCGAAAGCGACGACGAGCTTCA
GCCATTCGTTGTCATCCCGACCCAGTGCCTTCATCTGAATGCCAGCATGC
GGGTAATTTTTTCGACACCCTCTCTCATTTTTTACTTCAATCTGAGGAAA
TTCAGCGGGATCGTTGCAAGTTCTACCGCGCTGATGCCGAGAAGTCGCCA
TCGGTGCAATCTAATGGGAAAGCGGACACTTCATGCAAGGGCGTCTCTGG
TAGTGTCGAAACTATATCAGCGCCTGAATTTGAAGCGAAGAAGTCATACA
CATATTCGGCCCGTGAAAGGTGCAGCCTAAACGTATCAGTCGCACTTAAG
CATTGTGAAGTGAGAGAGCTCGCTACGGGGCCAGGAAATCAGGTGGTGGA
GATTTCGATAGAAGGCCTTGATCCTTCTCCCCGACATGAGGCCCCATACG
AAATATCGCCATGCTTTAACTCACGTGTACGCATGAAGCACTCCCACCAC
AGTGATGTCTACGCCTCTTCTCTACACTCGAGTGGAGAAACTGCAGCTGT
GATTAGCAAGCCCGATGCGGCCTCCACCGAGAGATCCAATGATTTGAGAA
GCTCATGCATACAGCCCTCAACTTTTGTGGCTTTTCCTGACTCAATTTCC
GATGATTTATTACCAACGCATCATAGCAATTCTAATTGCTACTCTTGTGA
GGACGAACACAATGCAAAGGTGTCCACAAACATAATAGATTTGTCCTCTC
TTCGCACCCAGCACTTGAGTCATGTCAATTTTACTGACTCACGTCGCGAG
AAGTCATCCCTTTCACCTGGTTTAAAAGGGGACAAGAATACGGTGTGGCA
AGCTGGCGGGACAACAGAACCAATTTCCGTGAAACGCGACTCTTTGAGCA
GTTTTGCTCAAAGAGAGAATAGCGAAGACGGGTACATGACGGAATCAAGT
GGGCTCTCCCTCTCTACTGCGCGTTCCATCTCTTCTTCATCATTCACGTC
TTCGTCCTGCGACTGTTCTTCATGCTGCCTCTCAAACTCAACTTCCTCGT
CTTCTCCAAGCTCTAAATCAACAATGGAGGATGATGTTTGA back to topCoding sequence (CDS) from alignment at KK037250.1:141650..143640- >rna8779 ID=rna8779|Name=rna8779|organism=Nannochloropsis gaditana|type=CDS|length=3234bp|location=Sequence derived from alignment at KK037250.1:141650..143640- (Nannochloropsis gaditana)
CATCAGTAGTGCTCATGGCGACCTCAAAACCTACTGTTCTGCCGTCAGAC
TACGCTGTAATACCAATTCCTATTCCATTCTACCCATCATCATGCACAAA
ACTTCACGTACAAGAGGAATCGGGAAACGCGCAACGACAGCATCAAATGT
CGCGATCTTTCCCTCCTCTCCGTAACTCTTCCTTCTGCCCGACATATGGC
CCGAAACACTCCCGACAGGCACAAACGACATGTACGCCTGTAAGGGTCCG
ACAGCGATCCTGCCTCCCTGCGGAACTGACAAAGTCGTTGCAATGCTTTC
CTAAACCAAAAGTCCCTTGCCTGGGCGCTTCTGTCCGAACTATAACTACT
CGTTTAACGAGTAAGGACATGATCAAGAAATTAAGCAGGGGTGGTGATCG
AAAGCGACGACGAGCTTCAGCCATTCGTTGTCATCCCGACCCAGTGCCTT
CATCTGAATGCCAGCATGCGGGTAATTTTTTCGACACCCTCTCTCATTTT
TTACTTCAATCTGAGGAAATTCAGCGGGATCGTTGCAAGTTCTACCGCGC
TGATGCCGAGAAGTCGCCATCGGTGCAATCTAATGGGAAAGCGGACACTT
CATGCAAGGGCGTCTCTGGTAGTGTCGAAACTATATCAGCGCCTGAATTT
GAAGCGAAGAAGTCATACACATATTCGGCCCGTGAAAGGTGCAGCCTAAA
CGTATCAGTCGCACTTAAGCATTGTGAAGTGAGAGAGCTCGCTACGGGGC
CAGGAAATCAGGTGGTGGAGATTTCGATAGAAGGCCTTGATCCTTCTCCC
CGACATGAGGCCCCATACGAAATATCGCCATGCTTTAACTCACGTGTACG
CATGAAGCACTCCCACCACAGTGATGTCTACGCCTCTTCTCTACACTCGA
GTGGAGAAACTGCAGCTGTGATTAGCAAGCCCGATGCGGCCTCCACCGAG
AGATCCAATGATTTGAGAAGCTCATGCATACAGCCCTCAACTTTTGTGGC
TTTTCCTGACTCAATTTCCGATGATTTATTACCAACGCATCATAGCAATT
CTAATTGCTACTCTTGTGAGGACGAACACAATGCAAAGGTGTCCACAAAC
ATAATAGATTTGTCCTCTCTTCGCACCCAGCACTTGAGTCATGTCAATTT
TACTGACTCACGTCGCGAGAAGTCATCCCTTTCACCTGGTTTAAAAGGGG
ACAAGAATACGGTGTGGCAAGCTGGCGGGACAACAGAACCAATTTCCGTG
AAACGCGACTCTTTGAGCAGTTTTGCTCAAAGAGAGAATAGCGAAGACGG
GTACATGACGGAATCAAGTGGGCTCTCCCTCTCTACTGCGCGTTCCATCT
CTTCTTCATCATTCACGTCTTCGTCCTGCGACTGTTCTTCATGCTGCCTC
TCAAACTCAACTTCCTCGTCTTCTCCAAGCTCTAAATCAACAATGGAGGA
TGATGTTTGAATGTATTCAACGACGATCATGTGCGAGCGCAAACACTTGG
CACCGGGACGAACAAGCCTTCACCCGTTAAGGCGTCACCTTCATAGAAGC
TTTGATCGCAAAAAAATAATTTTAGACTACCAAAAAGATATTGCAATGAA
AATTTACGATGAGCTTTCATCAGTAGTGCTCATGGCGACCTCAAAACCTA
CTGTTCTGCCGTCAGACTACGCTGTAATACCAATTCCTATTCCATTCTAC
CCATCATCATGCACAAAACTTCACGTACAAGAGGAATCGGGAAACGCGCA
ACGACAGCATCAAATGTCGCGATCTTTCCCTCCTCTCCGTAACTCTTCCT
TCTGCCCGACATATGGCCCGAAACACTCCCGACAGGCACAAACGACATGT
ACGCCTGTAAGGGTCCGACAGCGATCCTGCCTCCCTGCGGAACTGACAAA
GTCGTTGCAATGCTTTCCTAAACCAAAAGTCCCTTGCCTGGGCGCTTCTG
TCCGAACTATAACTACTCGTTTAACGAGTAAGGACATGATCAAGAAATTA
AGCAGGGGTGGTGATCGAAAGCGACGACGAGCTTCAGCCATTCGTTGTCA
TCCCGACCCAGTGCCTTCATCTGAATGCCAGCATGCGGGTAATTTTTTCG
ACACCCTCTCTCATTTTTTACTTCAATCTGAGGAAATTCAGCGGGATCGT
TGCAAGTTCTACCGCGCTGATGCCGAGAAGTCGCCATCGGTGCAATCTAA
TGGGAAAGCGGACACTTCATGCAAGGGCGTCTCTGGTAGTGTCGAAACTA
TATCAGCGCCTGAATTTGAAGCGAAGAAGTCATACACATATTCGGCCCGT
GAAAGGTGCAGCCTAAACGTATCAGTCGCACTTAAGCATTGTGAAGTGAG
AGAGCTCGCTACGGGGCCAGGAAATCAGGTGGTGGAGATTTCGATAGAAG
GCCTTGATCCTTCTCCCCGACATGAGGCCCCATACGAAATATCGCCATGC
TTTAACTCACGTGTACGCATGAAGCACTCCCACCACAGTGATGTCTACGC
CTCTTCTCTACACTCGAGTGGAGAAACTGCAGCTGTGATTAGCAAGCCCG
ATGCGGCCTCCACCGAGAGATCCAATGATTTGAGAAGCTCATGCATACAG
CCCTCAACTTTTGTGGCTTTTCCTGACTCAATTTCCGATGATTTATTACC
AACGCATCATAGCAATTCTAATTGCTACTCTTGTGAGGACGAACACAATG
CAAAGGTGTCCACAAACATAATAGATTTGTCCTCTCTTCGCACCCAGCAC
TTGAGTCATGTCAATTTTACTGACTCACGTCGCGAGAAGTCATCCCTTTC
ACCTGGTTTAAAAGGGGACAAGAATACGGTGTGGCAAGCTGGCGGGACAA
CAGAACCAATTTCCGTGAAACGCGACTCTTTGAGCAGTTTTGCTCAAAGA
GAGAATAGCGAAGACGGGTACATGACGGAATCAAGTGGGCTCTCCCTCTC
TACTGCGCGTTCCATCTCTTCTTCATCATTCACGTCTTCGTCCTGCGACT
GTTCTTCATGCTGCCTCTCAAACTCAACTTCCTCGTCTTCTCCAAGCTCT
AAATCAACAATGGAGGATGATGTTTGAATGTATTCAACGACGATCATGTG
CGAGCGCAAACACTTGGCACCGGGACGAACAAGCCTTCACCCGTTAAGGC
GTCACCTTCATAGAAGCTTTGATCGCAAAAAAATAATTTTAGACTACCAA
AAAGATATTGCAATGAAAATTTACGATGAGCTTT back to top
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