rna8765, rna8765 (mRNA) Nannochloropsis gaditana

Overview
Namerna8765
Unique Namerna8765
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1379
Alignment locationKK037250.1:114396..115930 -

Link to JBrowse

Properties
Property NameValue
Productenoyl- hydratase domain-containing protein 1
Orig transcript idgnl|cribi|Naga_100220g12.7212.mrna
Orig protein idgnl|cribi|Naga_100220g12.7212
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:114396..115930 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100220g12gene8497Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8765rna8765-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21937.1cds8735Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8765 ID=rna8765|Name=rna8765|organism=Nannochloropsis gaditana|type=mRNA|length=1379bp
ACAAACATACATTGTAGGCGGACACGCTTGAGTGGGCGTGAGCTGCGTCA
CACATTCCTGTGTGGCTACAAGTGGTGGAACGCTATTCGACACCAGCAAC
AGGAGCAGCAGCCACGGTTAAAAGCCTGGGTGACTACAAAACTTCGTTCA
TCTGATGGCAGATCATTCTTCTATAGGAAGCAACCGGTCGCGCTCAAACA
GGCCCTTAGAATTTACTTCGCATCGTCACACTCAAATGGCTGAGGGTGGC
ATGCAGATCTCTTCTCTTGCCCCCCCCCACGCTCCCCTCTCCGGTTCCCA
TCATCTTAAACCCGAACCAGCAACAGCTTTGAGTCAAGGTAAAGACGCAC
ATGGGGTTAACTCCGACACAATCACCGCGGGTTCCCGCATGTCGCGCGCC
CGCCGGACTCCCCTTCCTGTTCAAGACGTCAAGAGAGAGGTCTGCAGCGC
CAGCGAGGGCGTGAGTCTGACGCCAGTAAAAGACAAAGACAAGAGCGGCT
GGCGTGGTGGACATTGCTCTCCTTCCTCGTCCACGTCCCCTCAGTTACAC
AATGGGGCGACGAAGAAGCCGGCAAAGCGCACACAGCATATGTGCGAGGA
CGTGGTTGGGGGCCCAGGAAGAGGGGCGGGGAAAGACGCGGAGGAGGACG
CTGCGTCGATGAGTTTGGATGGAGGTACGGACGTGGGCAAAAGAGGAAAG
GCAGGGCGCTCAGGAGGAAAGCCGGGGAGGCCACGGCACTACGTGCTTGG
AGAGATGAAGGAGGAGGAGGAGGTAGAGGTGGGGGACATGCTGTTTCGAA
GGGAGCTTCTCGCCCGCCGGCTCGAGTCTCTGAGCGCGGGGGGGGCAGGA
GTGGCCGGTGGAGGAGGGGGGAAGTCCACGGTGCCGGGGCGAGGCCCGGA
CGTGCACTGGGACTACCTGCTGAAGGAGATGCAGTGGATGTCGGCAGACT
TCCAGCAGGAACGAGCCTCGCACCTGCGGAAGCGGAAAAAGTGCGCGAAG
GCCGTGGTCGGGTATTTTAAAAGCATGGGCTCCCGGGAAGAGCGACAGGC
GCGGGAGGAGCAGGAGAAACGGCGGCGGTTGGCGGCTCGGATCGGTCGGG
AGGTGAAGTCTTTCTGGAGGAAGGTGAACCAGGTGGTGGCGTTCAAGCAG
AAGCTGGAGGTGGAGGAGGGGCGGAAGCGTGCCATGGACAAGCACTTGGG
CTTCCTGCTCGGACAGACGGAGAGGTACTCGACGATGGTGGCCAGGAACA
TGGTGCTGGGGGCCAGGGGGGGAGGCGGGGGAGGCGGCGGCGGCGGAGGC
GGAAGGCGGCGGTGGCGGCGGTGGGAGGGGCCTCTAGGGCGGGAGAGGAG
ATGGAGGAGGAGGAGGAGGAGGAGGAGGA
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protein sequence of rna8765

>rna8765-protein ID=rna8765-protein|Name=rna8765|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MTPQALHCGLLLGRQVAFKRWCSGLSVATPSASRLRHLSSNAAFSKIVAA
LTPTACGKEENVDITAFQEKLRSAGDSSGYIELKRSDHDDRVLELIIKNP
KSRNSLTGKMMMTLSDISRELNVPMENNKFKDCCALILSSEGTSFCAGAD
FHLASSIATPEEGVLMAELMTDTLTRLRRAPLISVAAIGGPAMGGGAELA
TSTDFRVMSPRAKMQFVQSRMGVSCGWGGTSRLVKLVGRQKTLHVLGTAL
PLDARTAKGMGLVDVVCDEEVDVQHAAWEFLVPFLRHTTESLRAIKYGVA
AEDLTWDRAREVELGAFQTTWGSAANKHALATAKERIAADKKR
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mRNA from alignment at KK037250.1:114396..115930-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8765 ID=rna8765|Name=rna8765|organism=Nannochloropsis gaditana|type=mRNA|length=1535bp|location=Sequence derived from alignment at KK037250.1:114396..115930- (Nannochloropsis gaditana)
ATGACACCTCAAGCCTTGCACTGCGGGCTACTATTGGGACGGCAGGTCGC TTTCAAGCGATGGTGCTCTGGTTTAAGTGTGGCTACCCCTTCTGCAAGCC GACTCCGTCATTTATCCTCTAATGCTGCCTTTTCCAAGATTGTCGCTGCG CTGACTCCGACCGCATGTGGAAAGGAGGAGAACGTAGACATCACAGCTTT TCAGGAGAAATTGCGTTCGGCCGGCGACTCAAGCGGCTATGTAGGTGGGG GAATGCAAGTGACGTAAAAATATGAGTAGGCCGGTCACGTTCTTGACAAA TTTAAATCAACCCCTTCTCATTGATACGAAATAGATCGAACTCAAGCGGA GTGACCACGATGACCGCGTTCTGGAACTCATCATAAAAAATCCCAAGAGC AGGTCTGTTGCCCTAAATCTTAGAACCTGTAGGCACATGTAGGGTCCTCA TGGCTGAGAATCTTCCATCTCTTCCGCCCTCAGAAACAGCCTGACGGGCA AAATGATGATGACCTTAAGTGACATTTCTAGGGAATTGAATGTCCCGATG GAAAACAACAAATTCAAGGATTGCTGCGCACTCATCCTGAGTAGCGAAGG GACCTCATTTTGCGCGGGCGCCGACTTCCACCTGGCATCATCAATTGCTA CCCCCGAGGAGGGCGTGCTGATGGCTGAGCTGATGACTGATACCCTTACA AGACTTCGGTAAGGCATATCGACCACCTGTAGTGACGAATGCGGAGTGCA GTGCCATGTCGTAATCATCCTTATCACCTGCTAGGCGTGCTCCCCTAATA TCTGTAGCAGCCATCGGAGGACCGGCGATGGGTGGAGGTGCGGAGCTAGC TACTAGTACCGATTTTCGAGTCATGTCTCCTAGGGCCAAAATGCAATTTG TGCAAAGTCGAATGGGCGTGAGCTGCGGCTGGGGCGGCACCTCCCGCCTT GTCAAGGTAGGGCGGTGGGAAATGGGCCTCACACGTATTTTGTCGGCTTT TATTTCAAAGTTCTCTTTCCGAGAACCAAAGTAGGTACAGTGTATCATAA TTTCTTGACGGCTTTTCCCTCCGATCGCTGTTCCCATTGCAGTTGGTAGG TCGTCAGAAGACTCTCCATGTCCTGGGGACCGCTTTGCCCTTGGACGCGA GAACCGCCAAGGGCATGGGCTTGGTGGACGTGGTGTGTGACGAGGAGGTG GATGTCCAGCATGCAGCTTGGGAGTTTCTGGTCCCGTTTCTTCGACATAC CACTGGTCCGTTAACCTGCCCGTCTTTCTGTGACACTTCGTTTCATCACA ACCCTTGTCGTAAAACATTGTATGAAAGTCAGGGATCCCTGCCTCCTTTC CCCCCCCAAATAACTGAACAGAGTCCTTACGTGCTATTAAATATGGCGTC GCTGCGGAAGATTTGACTTGGGATCGCGCTCGAGAAGTGGAACTGGGGGC TTTTCAGACAACATGGGGGAGCGCTGCAAACAAGCATGCCCTTGCCACCG CCAAAGAGAGAATAGCCGCAGATAAAAAGCGTTGA
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Coding sequence (CDS) from alignment at KK037250.1:114396..115930-

>rna8765 ID=rna8765|Name=rna8765|organism=Nannochloropsis gaditana|type=CDS|length=6192bp|location=Sequence derived from alignment at KK037250.1:114396..115930- (Nannochloropsis gaditana)
AGTCCTTACGTGCTATTAAATATGGCGTCGCTGCGGAAGATTTGACTTGG
GATCGCGCTCGAGAAGTGGAACTGGGGGCTTTTCAGACAACATGGGGGAG
CGCTGCAAACAAGCATGCCCTTGCCACCGCCAAAGAGAGAATAGCCGCAG
ATAAAAAGCGTTGATTGGTAGGTCGTCAGAAGACTCTCCATGTCCTGGGG
ACCGCTTTGCCCTTGGACGCGAGAACCGCCAAGGGCATGGGCTTGGTGGA
CGTGGTGTGTGACGAGGAGGTGGATGTCCAGCATGCAGCTTGGGAGTTTC
TGGTCCCGTTTCTTCGACATACCACTGGCGTGCTCCCCTAATATCTGTAG
CAGCCATCGGAGGACCGGCGATGGGTGGAGGTGCGGAGCTAGCTACTAGT
ACCGATTTTCGAGTCATGTCTCCTAGGGCCAAAATGCAATTTGTGCAAAG
TCGAATGGGCGTGAGCTGCGGCTGGGGCGGCACCTCCCGCCTTGTCAAGA
AACAGCCTGACGGGCAAAATGATGATGACCTTAAGTGACATTTCTAGGGA
ATTGAATGTCCCGATGGAAAACAACAAATTCAAGGATTGCTGCGCACTCA
TCCTGAGTAGCGAAGGGACCTCATTTTGCGCGGGCGCCGACTTCCACCTG
GCATCATCAATTGCTACCCCCGAGGAGGGCGTGCTGATGGCTGAGCTGAT
GACTGATACCCTTACAAGACTTCGATCGAACTCAAGCGGAGTGACCACGA
TGACCGCGTTCTGGAACTCATCATAAAAAATCCCAAGAGCAGATGACACC
TCAAGCCTTGCACTGCGGGCTACTATTGGGACGGCAGGTCGCTTTCAAGC
GATGGTGCTCTGGTTTAAGTGTGGCTACCCCTTCTGCAAGCCGACTCCGT
CATTTATCCTCTAATGCTGCCTTTTCCAAGATTGTCGCTGCGCTGACTCC
GACCGCATGTGGAAAGGAGGAGAACGTAGACATCACAGCTTTTCAGGAGA
AATTGCGTTCGGCCGGCGACTCAAGCGGCTATAGTCCTTACGTGCTATTA
AATATGGCGTCGCTGCGGAAGATTTGACTTGGGATCGCGCTCGAGAAGTG
GAACTGGGGGCTTTTCAGACAACATGGGGGAGCGCTGCAAACAAGCATGC
CCTTGCCACCGCCAAAGAGAGAATAGCCGCAGATAAAAAGCGTTGATTGG
TAGGTCGTCAGAAGACTCTCCATGTCCTGGGGACCGCTTTGCCCTTGGAC
GCGAGAACCGCCAAGGGCATGGGCTTGGTGGACGTGGTGTGTGACGAGGA
GGTGGATGTCCAGCATGCAGCTTGGGAGTTTCTGGTCCCGTTTCTTCGAC
ATACCACTGGCGTGCTCCCCTAATATCTGTAGCAGCCATCGGAGGACCGG
CGATGGGTGGAGGTGCGGAGCTAGCTACTAGTACCGATTTTCGAGTCATG
TCTCCTAGGGCCAAAATGCAATTTGTGCAAAGTCGAATGGGCGTGAGCTG
CGGCTGGGGCGGCACCTCCCGCCTTGTCAAGAAACAGCCTGACGGGCAAA
ATGATGATGACCTTAAGTGACATTTCTAGGGAATTGAATGTCCCGATGGA
AAACAACAAATTCAAGGATTGCTGCGCACTCATCCTGAGTAGCGAAGGGA
CCTCATTTTGCGCGGGCGCCGACTTCCACCTGGCATCATCAATTGCTACC
CCCGAGGAGGGCGTGCTGATGGCTGAGCTGATGACTGATACCCTTACAAG
ACTTCGATCGAACTCAAGCGGAGTGACCACGATGACCGCGTTCTGGAACT
CATCATAAAAAATCCCAAGAGCAGATGACACCTCAAGCCTTGCACTGCGG
GCTACTATTGGGACGGCAGGTCGCTTTCAAGCGATGGTGCTCTGGTTTAA
GTGTGGCTACCCCTTCTGCAAGCCGACTCCGTCATTTATCCTCTAATGCT
GCCTTTTCCAAGATTGTCGCTGCGCTGACTCCGACCGCATGTGGAAAGGA
GGAGAACGTAGACATCACAGCTTTTCAGGAGAAATTGCGTTCGGCCGGCG
ACTCAAGCGGCTATAGTCCTTACGTGCTATTAAATATGGCGTCGCTGCGG
AAGATTTGACTTGGGATCGCGCTCGAGAAGTGGAACTGGGGGCTTTTCAG
ACAACATGGGGGAGCGCTGCAAACAAGCATGCCCTTGCCACCGCCAAAGA
GAGAATAGCCGCAGATAAAAAGCGTTGATTGGTAGGTCGTCAGAAGACTC
TCCATGTCCTGGGGACCGCTTTGCCCTTGGACGCGAGAACCGCCAAGGGC
ATGGGCTTGGTGGACGTGGTGTGTGACGAGGAGGTGGATGTCCAGCATGC
AGCTTGGGAGTTTCTGGTCCCGTTTCTTCGACATACCACTGGCGTGCTCC
CCTAATATCTGTAGCAGCCATCGGAGGACCGGCGATGGGTGGAGGTGCGG
AGCTAGCTACTAGTACCGATTTTCGAGTCATGTCTCCTAGGGCCAAAATG
CAATTTGTGCAAAGTCGAATGGGCGTGAGCTGCGGCTGGGGCGGCACCTC
CCGCCTTGTCAAGAAACAGCCTGACGGGCAAAATGATGATGACCTTAAGT
GACATTTCTAGGGAATTGAATGTCCCGATGGAAAACAACAAATTCAAGGA
TTGCTGCGCACTCATCCTGAGTAGCGAAGGGACCTCATTTTGCGCGGGCG
CCGACTTCCACCTGGCATCATCAATTGCTACCCCCGAGGAGGGCGTGCTG
ATGGCTGAGCTGATGACTGATACCCTTACAAGACTTCGATCGAACTCAAG
CGGAGTGACCACGATGACCGCGTTCTGGAACTCATCATAAAAAATCCCAA
GAGCAGATGACACCTCAAGCCTTGCACTGCGGGCTACTATTGGGACGGCA
GGTCGCTTTCAAGCGATGGTGCTCTGGTTTAAGTGTGGCTACCCCTTCTG
CAAGCCGACTCCGTCATTTATCCTCTAATGCTGCCTTTTCCAAGATTGTC
GCTGCGCTGACTCCGACCGCATGTGGAAAGGAGGAGAACGTAGACATCAC
AGCTTTTCAGGAGAAATTGCGTTCGGCCGGCGACTCAAGCGGCTATAGTC
CTTACGTGCTATTAAATATGGCGTCGCTGCGGAAGATTTGACTTGGGATC
GCGCTCGAGAAGTGGAACTGGGGGCTTTTCAGACAACATGGGGGAGCGCT
GCAAACAAGCATGCCCTTGCCACCGCCAAAGAGAGAATAGCCGCAGATAA
AAAGCGTTGATTGGTAGGTCGTCAGAAGACTCTCCATGTCCTGGGGACCG
CTTTGCCCTTGGACGCGAGAACCGCCAAGGGCATGGGCTTGGTGGACGTG
GTGTGTGACGAGGAGGTGGATGTCCAGCATGCAGCTTGGGAGTTTCTGGT
CCCGTTTCTTCGACATACCACTGGCGTGCTCCCCTAATATCTGTAGCAGC
CATCGGAGGACCGGCGATGGGTGGAGGTGCGGAGCTAGCTACTAGTACCG
ATTTTCGAGTCATGTCTCCTAGGGCCAAAATGCAATTTGTGCAAAGTCGA
ATGGGCGTGAGCTGCGGCTGGGGCGGCACCTCCCGCCTTGTCAAGAAACA
GCCTGACGGGCAAAATGATGATGACCTTAAGTGACATTTCTAGGGAATTG
AATGTCCCGATGGAAAACAACAAATTCAAGGATTGCTGCGCACTCATCCT
GAGTAGCGAAGGGACCTCATTTTGCGCGGGCGCCGACTTCCACCTGGCAT
CATCAATTGCTACCCCCGAGGAGGGCGTGCTGATGGCTGAGCTGATGACT
GATACCCTTACAAGACTTCGATCGAACTCAAGCGGAGTGACCACGATGAC
CGCGTTCTGGAACTCATCATAAAAAATCCCAAGAGCAGATGACACCTCAA
GCCTTGCACTGCGGGCTACTATTGGGACGGCAGGTCGCTTTCAAGCGATG
GTGCTCTGGTTTAAGTGTGGCTACCCCTTCTGCAAGCCGACTCCGTCATT
TATCCTCTAATGCTGCCTTTTCCAAGATTGTCGCTGCGCTGACTCCGACC
GCATGTGGAAAGGAGGAGAACGTAGACATCACAGCTTTTCAGGAGAAATT
GCGTTCGGCCGGCGACTCAAGCGGCTATAGTCCTTACGTGCTATTAAATA
TGGCGTCGCTGCGGAAGATTTGACTTGGGATCGCGCTCGAGAAGTGGAAC
TGGGGGCTTTTCAGACAACATGGGGGAGCGCTGCAAACAAGCATGCCCTT
GCCACCGCCAAAGAGAGAATAGCCGCAGATAAAAAGCGTTGATTGGTAGG
TCGTCAGAAGACTCTCCATGTCCTGGGGACCGCTTTGCCCTTGGACGCGA
GAACCGCCAAGGGCATGGGCTTGGTGGACGTGGTGTGTGACGAGGAGGTG
GATGTCCAGCATGCAGCTTGGGAGTTTCTGGTCCCGTTTCTTCGACATAC
CACTGGCGTGCTCCCCTAATATCTGTAGCAGCCATCGGAGGACCGGCGAT
GGGTGGAGGTGCGGAGCTAGCTACTAGTACCGATTTTCGAGTCATGTCTC
CTAGGGCCAAAATGCAATTTGTGCAAAGTCGAATGGGCGTGAGCTGCGGC
TGGGGCGGCACCTCCCGCCTTGTCAAGAAACAGCCTGACGGGCAAAATGA
TGATGACCTTAAGTGACATTTCTAGGGAATTGAATGTCCCGATGGAAAAC
AACAAATTCAAGGATTGCTGCGCACTCATCCTGAGTAGCGAAGGGACCTC
ATTTTGCGCGGGCGCCGACTTCCACCTGGCATCATCAATTGCTACCCCCG
AGGAGGGCGTGCTGATGGCTGAGCTGATGACTGATACCCTTACAAGACTT
CGATCGAACTCAAGCGGAGTGACCACGATGACCGCGTTCTGGAACTCATC
ATAAAAAATCCCAAGAGCAGATGACACCTCAAGCCTTGCACTGCGGGCTA
CTATTGGGACGGCAGGTCGCTTTCAAGCGATGGTGCTCTGGTTTAAGTGT
GGCTACCCCTTCTGCAAGCCGACTCCGTCATTTATCCTCTAATGCTGCCT
TTTCCAAGATTGTCGCTGCGCTGACTCCGACCGCATGTGGAAAGGAGGAG
AACGTAGACATCACAGCTTTTCAGGAGAAATTGCGTTCGGCCGGCGACTC
AAGCGGCTATAGTCCTTACGTGCTATTAAATATGGCGTCGCTGCGGAAGA
TTTGACTTGGGATCGCGCTCGAGAAGTGGAACTGGGGGCTTTTCAGACAA
CATGGGGGAGCGCTGCAAACAAGCATGCCCTTGCCACCGCCAAAGAGAGA
ATAGCCGCAGATAAAAAGCGTTGATTGGTAGGTCGTCAGAAGACTCTCCA
TGTCCTGGGGACCGCTTTGCCCTTGGACGCGAGAACCGCCAAGGGCATGG
GCTTGGTGGACGTGGTGTGTGACGAGGAGGTGGATGTCCAGCATGCAGCT
TGGGAGTTTCTGGTCCCGTTTCTTCGACATACCACTGGCGTGCTCCCCTA
ATATCTGTAGCAGCCATCGGAGGACCGGCGATGGGTGGAGGTGCGGAGCT
AGCTACTAGTACCGATTTTCGAGTCATGTCTCCTAGGGCCAAAATGCAAT
TTGTGCAAAGTCGAATGGGCGTGAGCTGCGGCTGGGGCGGCACCTCCCGC
CTTGTCAAGAAACAGCCTGACGGGCAAAATGATGATGACCTTAAGTGACA
TTTCTAGGGAATTGAATGTCCCGATGGAAAACAACAAATTCAAGGATTGC
TGCGCACTCATCCTGAGTAGCGAAGGGACCTCATTTTGCGCGGGCGCCGA
CTTCCACCTGGCATCATCAATTGCTACCCCCGAGGAGGGCGTGCTGATGG
CTGAGCTGATGACTGATACCCTTACAAGACTTCGATCGAACTCAAGCGGA
GTGACCACGATGACCGCGTTCTGGAACTCATCATAAAAAATCCCAAGAGC
AGATGACACCTCAAGCCTTGCACTGCGGGCTACTATTGGGACGGCAGGTC
GCTTTCAAGCGATGGTGCTCTGGTTTAAGTGTGGCTACCCCTTCTGCAAG
CCGACTCCGTCATTTATCCTCTAATGCTGCCTTTTCCAAGATTGTCGCTG
CGCTGACTCCGACCGCATGTGGAAAGGAGGAGAACGTAGACATCACAGCT
TTTCAGGAGAAATTGCGTTCGGCCGGCGACTCAAGCGGCTAT
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Synonyms
Publications