rna8762, rna8762 (mRNA) Nannochloropsis gaditana

Overview
Namerna8762
Unique Namerna8762
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2507
Alignment locationKK037250.1:104686..105817 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101052g1.7800.mrna
Orig protein idgnl|cribi|Naga_101052g1.7800
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:104686..105817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101052g1gene8494Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21941.1cds8732Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8762rna8762-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8762 ID=rna8762|Name=rna8762|organism=Nannochloropsis gaditana|type=mRNA|length=2507bp
GTGTGGCACGCGCTGGTGTTTGTGCATGAATGTGGTGCTTACATGGCGCT
GGGACCGACGACTCACGAAAGCCGCCCTCAGCACCACTCACTGCGTCCTT
CTTCTTGTCTTCCTCTTTCTGCCCCCCCGTGCCCTCCTGCCTTCACTTGA
GTCCGACGCTTGCTTGCGCCTCCATGGCCGTTTTGTGATCCTTTAGAAGA
CATTGCTTCCCACAAAGCATTGCGCGATGTTTACAAGGCTGTTGTCCTGG
CACTTCTCAGGAGACATTCCTAGTGATGAGGAATGACCGAGCAGAGAACT
TCGACGTAGCATCACCACCACGATTCACAGCCTCCCGACACTTCACTAAT
AGGGCGTTGCACCACACAGCGACGACAACAAGCTACAGAATGACCAACTC
CACCGAGGTGACAGAGACGCCCGCTGCGGCCGAGGCCGAAGAGGCGGTTC
CCAAGGCACCCAAGGCTACACCCTCCACGACTCCCGCCCGCCCGGATAGG
CGGGCTCTGGACAAGGCGGTTTCTGCGCTTCAGTCGGAAATCGATTCCTT
GAACGAGCAGATCGCGGGCTACGACAAGCAGATAGAGGAGGTGAAGAAAA
AAATTGACGTGGCCATGGCCGCGCGTTCAGGAGAACAAGACGAGCTGAGC
AAGGAACGTGCCAAGCGGGATGCTATCAAGGCGGAGCTGGACAAATTGAA
GGGCGAGAAGGACGCTCTCTCCAGCGAGTTCGACCGACTAAAAGGCAAAC
TCGACTCGGCCATGGACGCGAGCAAGAGCGCCAAGTCTCAGATGAAGTTC
CGCACGGTGGAGGAGATCAACGCAGAGATGGCTCGTCTGAACAAGCTGCA
GAGCACCACTAGCATGGTCCTGTCGGAAGAGAAGAAGCTGGTGAAGGAGC
TGGAGAGCCTGCGCGCGCAGAAGCGGCAGCTCTCCGCCTTGGGGGCCTCG
GAGGGTCTGATCAAGAATGACAAGGAGGAGCGCGCCCGGCTGCAGGCATC
ATTGAAGGCGAAGAGGGACGAGGTCAACGAGTGCTTCGGTCGGCTCACGG
CGCAGCGGGAGGTGTGCGACAAAGTGCAGGCCAAGGAGAACGGGGGGGAG
GGCGGGAAGAAGGGCTTGATCCCCACCCTGCACGACCAGCGGAACGCGAT
CTGGAAGAAGAAATCGGAGGCGATCACGCAGATTAAGGCGCTGCGGGAGC
AGGTGAAGGAGAAGTGGGAGGAGTTCAAAGGCGCGCGCAAGGAGTGGGAG
GCCCACATGGAGGAGGAGAGGAAAGTGCGGGAGGCGGAGCGCAAGGCGCG
GCAGGAGGAATGGGAGAGGAAGATGGAGGAAGAGGAGGCCAAGAAGGTGC
CCTACGAGGAGGAGATGGCGCTCTGCGACTACTTGGTGAACTACTTGAAG
CAGAACTTCCTGACTGAGAAGGAAGAGCCGGTGGTGGCGGCGGCGGGCCC
CACCACCCCGGCCGCCGCGTTCGAGCATGAGGGGATGACGTTGCAGGCGT
TCAGGAGGGAGGACGAGGAGGAGGAACAGTGGGCGGGGGGCAAGAAGAAG
AAGGAGAAGAAGCAGGGCGGGGAGGGGGGTAGGAAAGGGAAGGGGGGCGG
GAAGAAGGATACGCTGGCGCACTCCCCGGAGCTCCTCGCCTCGTTTGCTC
TCCTCAAGCTGGACGCACCCAGCAAGGCGACAGGCGTGGAAGCAGCGGTC
GTGGCTTTGAAGGAGAAGAAGGAATGGTACTCGGTGCAGCCCCGACCTGT
GAAGAAGAAGGCGGCCAAGACGGAGGAGGGCGCAGGGGCGGAGGGGGAGG
AGGCGGTCAAAGAGGAGGGAGGGGCGGGGGACGCGGGGGCGAACAGGGGC
AAGGGCGGGAGGGGAGAGGGGGGGAAGGGGAAGGGGAAGGGTGAGAAGAA
GCAGCCCAAAGAGTTCAAGCGCTCGGAGGACGACTTTCCTTCCCTGGGGG
CCGCAATGGCGGCGCCGGCGGTGGCGCGAGCGTAGGCTTGAGTCTGGGGG
GGGGTTACTAGGGGAGTTGTGGTTTGATTTTAGTTCTTTCAGTTCTGTGT
GTGAGAAGAAGAGGAAATGGGAGGTAAAAGGGCATCGAGGGCGGGGCCAG
GAGGTTGTGGGCGTCGCGCCTAGGAGGGGGGATGGGAGGGCGATGGAGTG
GGAGGAGGAGAGAAGGTGGGAAAGAAGTGCATGAGCACCCAGGCCTAGAT
GGAGGGTAGATGGGCAGACCCCGAAATGCTGGGGGGAGGAATAGGTAGAA
GACGTGGTTGAGGAGGTGGAGGGCCAGCACAGGGAGCAGGGAAACGAGGG
GAAGCTTTCGAGAGGGTGGCGGCCATCAAGGGGCTCGCCGTGATCAGGAA
CGGGAGCGAGAGAGGTGAGGGAGACGGCGCGCATGGAGCAGTGTGGAGGG
AGGTTAATGTGAGAAGTAGGAGCTTTGAGGCCATGAGACGCGCTGTTAGG
GCACGTCGCAGGGGTCCCAAGGCGTTCGGCACGGGGCGAGAAGAAGGAAA
AAGGGGG
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protein sequence of rna8762

>rna8762-protein ID=rna8762-protein|Name=rna8762|organism=Nannochloropsis gaditana|type=polypeptide|length=266bp
MGGAAVARPGGGGGRGGKGRGCTGGAGVRAGGSAGKAKEGVLGVAQFPGA
PPSSMSAPTGPCQYPAPGYYAPNPSTHPQLGASSSHRLLSSGQASHPHHA
LELRQQLHLQQQRELQQQHLQQQQLQQQQQQQQQQQQQSQQQRDFQHQQE
LYRQQWAHHQQYLAHYYAQQQEQQCQVTHPHPQQHYQLQTQQPSPYPYDA
HQMTGNGSSPSYPPLAAPPPSLFPPSFAPAHNGVDYPHPYMYAQSTSDTF
APLPRQDGRGGGGGQG
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mRNA from alignment at KK037250.1:104686..105817-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8762 ID=rna8762|Name=rna8762|organism=Nannochloropsis gaditana|type=mRNA|length=1132bp|location=Sequence derived from alignment at KK037250.1:104686..105817- (Nannochloropsis gaditana)
ATGGGGGGAGCAGCGGTGGCCAGGCCAGGCGGTGGCGGTGGGCGAGGAGG
GAAAGGGAGGGGTTGCACCGGCGGTGCCGGAGTGAGAGCGGGAGGGTCGG
CTGGGAAGGCCAAGGAGGGGGTCCTCGGGGTGGCTCAATTTCCGGGCGCA
CCGCCGTCCTCCATGTCTGCTCCCACAGGGCCCTGTCAGTACCCAGCCCC
GGGCTACTATGCCCCAAACCCCTCCACTCATCCCCAGCTCGGCGCCAGCT
CAAGCCACCGGCTTTTGTCCTCGGGGCAGGCCTCGCATCCGCATCACGCG
CTTGAGCTTCGACAGCAGCTGCACTTACAACAGCAACGGGAACTGCAGCA
GCAGCACCTGCAGCAGCAGCAACTGCAGCAGCAGCAACAACAGCAGCAGC
AACAACAGCAGCAATCGCAACAGCAGCGTGACTTCCAGCATCAGCAGGAG
CTGTACCGGCAACAATGGGCCCACCACCAGCAATACCTCGCCCATTACTA
CGCCCAGCAGCAAGAGCAGCAATGTCAAGTCACCCACCCCCATCCTCAGC
AACACTATCAGCTCCAGACACAGCAGCCGTCTCCTTACCCCTATGACGCC
CACCAAATGACCGGGAATGGATCCAGTCCTTCCTACCCGCCCCTGGCAGC
GCCCCCTCCATCGCTCTTTCCCCCCTCCTTCGCGCCCGCACACAACGGCG
TCGACTATCCGCACCCCTACATGTACGCACAAAGCACGTCTGACACTTTT
GCACCTCTCCCAAGACAAGACGGGAGAGGGGGAGGGGGAGGGCAGGGATA
GTGCCCATGTTCTGGAGAAGTAAGTGGGCACGCGAGAGAAGTGCGTCGAA
AGCCTGTACATATGCTCATGTCCATAAAAGCAAAGCCGTCGAGAATGGTC
CGGAGATGGCTCTCATCTCCTCTTGTAGTAATAGGGTCTTAGGGATGTGA
ATCTTTCCACAGCGAGGGGAGGGGCGGCGACAAAGCCGCACCCTCCCAGA
AAGATGCAAAATTAAAACGAGAGTATCAGCCTGACCACACAAGACGTGGG
GTTTTATGTCTTGCATGGCCTATGCCGGCCAGCACGCTTTCTTTCCGTCC
ATTTCCGCTACCACCGTGCGTGTATCCTCCCC
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Coding sequence (CDS) from alignment at KK037250.1:104686..105817-

>rna8762 ID=rna8762|Name=rna8762|organism=Nannochloropsis gaditana|type=CDS|length=801bp|location=Sequence derived from alignment at KK037250.1:104686..105817- (Nannochloropsis gaditana)
ATGGGGGGAGCAGCGGTGGCCAGGCCAGGCGGTGGCGGTGGGCGAGGAGG
GAAAGGGAGGGGTTGCACCGGCGGTGCCGGAGTGAGAGCGGGAGGGTCGG
CTGGGAAGGCCAAGGAGGGGGTCCTCGGGGTGGCTCAATTTCCGGGCGCA
CCGCCGTCCTCCATGTCTGCTCCCACAGGGCCCTGTCAGTACCCAGCCCC
GGGCTACTATGCCCCAAACCCCTCCACTCATCCCCAGCTCGGCGCCAGCT
CAAGCCACCGGCTTTTGTCCTCGGGGCAGGCCTCGCATCCGCATCACGCG
CTTGAGCTTCGACAGCAGCTGCACTTACAACAGCAACGGGAACTGCAGCA
GCAGCACCTGCAGCAGCAGCAACTGCAGCAGCAGCAACAACAGCAGCAGC
AACAACAGCAGCAATCGCAACAGCAGCGTGACTTCCAGCATCAGCAGGAG
CTGTACCGGCAACAATGGGCCCACCACCAGCAATACCTCGCCCATTACTA
CGCCCAGCAGCAAGAGCAGCAATGTCAAGTCACCCACCCCCATCCTCAGC
AACACTATCAGCTCCAGACACAGCAGCCGTCTCCTTACCCCTATGACGCC
CACCAAATGACCGGGAATGGATCCAGTCCTTCCTACCCGCCCCTGGCAGC
GCCCCCTCCATCGCTCTTTCCCCCCTCCTTCGCGCCCGCACACAACGGCG
TCGACTATCCGCACCCCTACATGTACGCACAAAGCACGTCTGACACTTTT
GCACCTCTCCCAAGACAAGACGGGAGAGGGGGAGGGGGAGGGCAGGGATA
G
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Synonyms
Publications