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Properties
| Property Name | Value |
|---|
| Product | atp-binding cassette sub-family f member 1 |
| Orig transcript id | gnl|cribi|Naga_100157g11.54.mrna |
| Orig protein id | gnl|cribi|Naga_100157g11.54 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:90708..94506 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8758 ID=rna8758|Name=rna8758|organism=Nannochloropsis gaditana|type=mRNA|length=2637bp
GTTGCGTAACACTTCTTCTGATGAGGTGCATTGGATGGTGTCGTACGTGT
TTTCGCCTCCTCGTCCACACCATCCGACTGTTTGTACCCATGATGACGCG
ATCACACCGTCTTCACGGGTTGGGACACTGTCGTCTTGCTGTTTGTCAAC
GTGCCACGCTACCTCGCCTTCGACAAAGATCTCCATGCCATCCGCGGCCG
GGAATACCTGGATTTTGGCATAGCTCCCACATCATGGGGAAATTCGGCAT
GCCACACCGCTCATTTAACTCCTGAGCGCTGCAACATGTGCAAGCCAAGC
GCCAAGACGCCCGAGCCACTTGTTCAGTTCTCAAGAGGGGCCGGGAGGAT
CGTCGCGGGCTTCGATGAAAGCGTCTCGCTTCAGTTTAAGCCCCAGCGTC
ATTCATAGTCACGTTGTTTTTCTCACAAAATCTCATTTTTCCTTGCAGAA
GTATGGTCAAGACTGCCGCCGTAAGCCTCCTGGCCCTAGCCGGGCTCGCA
TCTGCCTTCGTGCCCCCCACCACGAATTTTCGCAGCGCTAACAGATGGAC
GATTAAGGCCAAAGACACGTCCTTCACCCGCAACCTCATGATGAAGCTGG
GCGCGGACGACAAGGTCATTTTGATCGGCGTGGCCGCGGATTCCGGCTGT
GGAAAGTCGACGTTCATGCGGCGGCTGACCAACATCTTTGGTGGGAGCAA
CGTGGGCCCCCTGGGGGGCGGTTTCGACAACGGGGGATGGGAGACGAACA
CCCTGGTCTCGGACACGACCACCGTCATCTGCTTGGACGACTACCATGCC
AACGACCGCTCTGGGCGGAAAGTGACGGGCCGCACCGCCTTGGAAGCTGC
CGAGCAGAATTTTGACCTCATGTACGAGCAGCTCAAGGCCCTGAAGGAGG
GCAAAACTGTGGCCAAGCCCATCTACAACCACGTGAACGGGACCTTGGAC
CGGCCCGAGGAGGTGGTGCCCACCCCCATTGTGATCGTGGAGGGCTTGCA
CCCCTGGTACGACGCCCGCGTCAAGGACCTGCTCGACTACACTATCTACC
TGGACATATCGGACGAGATCAAGCGCGCATGGAAGATCCAGCGGGACATG
GCCGAGCGCGGATGGACCTTGGAGCAGGTGGAGGCAGAGATTGAAAAGCG
TAAGCCGGACTTCAATAAATTCGTGGGGCCCCAGAAGGAGGTAGCCGACT
CGGTGATCCAAGTCTTGCCCACAGAGCTGACCAACGACCCCGAGGGGAAG
ATCCTCCGCGTCCGGCTCATCCAGAAGGAGACGGGGGACTACGAACCCGT
CTACCTGTTCGACCAGGGCTCTACGGTCTCCTGGATTCCCTGCGGCACGA
AGCTGACATGCTCCTACCCCGGCATCAAGCTGGGCTCGGGACCGGACCGC
TGGTTCAACAACGCGGTGAACGTGGTGGAGATGGACGGCCAGTTTGACAA
GCTGGAAGAGCTTGCCTACGTGGAGAAGCACCTGGGGAACACGGCCAGCA
AGTACGACGGGGAGATCACGGCCCAGATGCTCAAGAACGAGGGCCCCCGG
GACCCTGAACGGCTCAGGCCTCTTCCAGACCATCGTCTCGCTCAAGATCC
GCGAGGTCTACGAGAAGCTGAGCGGGAAGAAGGTAGACGCCTCCGTCAAG
GCCCCCGTGGCCGCGTAAGCCGGCGGCAAAGGAGCGAGGGCTGGTTGGCT
GCTGAAAACAGGGTAGGCTTTGAGGTGTGGAGATCGTAACGGCTCCCACC
GGACCTCAGCAGCATCCCTTGAACAAACGGCGAGCCTCACACGCCGACTG
CTGCATGTTTTGTGTGTTCTGTGCTTTTCGTGTCCGGAGCCATCGCGTCG
TCTGCGCCGGGTGCCGGGCCCAGAGAGCGGGGGGAGGGCCAGGGAGGCAT
TCTGTTGTTTTGGGTGGTGTTTGGGGGATAGGAGACTGACCTGTCGGCCC
CTTTTTGACGTATCGCGAATTTCGATGAAATAATCGGCTCCATTCTCCAT
TAAATTGAAGCATGCATGGATGATGATCGAGGTGGGAGGGGCGCCTATAA
CACCGCCACCTGTGTCCCTGGGCGAGCTCTTCGGGTTCCTTTACTTTTCG
ACTCCGAAAACGCTTTTCTGAAACAAAGTCGCCAAGGTTACTCGCTGTTG
CCCATACCCCTTCCATTCGCGAGTCTAGAACTCCTTGCAGATCCCTGGAT
AAGAGATTCAAAAACGTTGCGGCCGAGGAGTCGATGGAATGCCTCCCTCC
TTGAACCCGCCCGGCCTGCGCGTGCTCATGGCTCGTGACAGACACCCATG
TCGACCTCGCCTGCGGGAGAGAAACAGAGCGTCCGAAAACAGCGCAAAGG
GAGTCCGAGAACTGCGCAAAGAAAGTCCGAGAGCAGCGCGCAGCAAAAGC
GAGGGTCCTTGTGGCCTGATTTCATCGTGGAAGATGTTACGAATCACGAC
TTATGCGCACCACTTCACTTCATCGAAGCGCGATCCTGTTTATACTTTCT
ACTGCACAAAATTGTGTGTCGATCCCCTCCTTCTCCCCCTCTCCTCCTCT
CCCTCGCCTCACTCATCTAAATGGCGTGCCAGCACATGATAGGTGGCGTC
ATAGCAGGGTAAAATTACACTGGCCACGGGCACGGCC back to topprotein sequence of rna8758 >rna8758-protein ID=rna8758-protein|Name=rna8758|organism=Nannochloropsis gaditana|type=polypeptide|length=655bp
MGGGRWGGGIEQVVRDLKEKLADSSLSGKARKRLEKDLGAAEREQEYQKA
AIKASAEGGQFACSQAAVNENDPQWQNALDIKVPDFSISAHNKELFHNSS
LSIAHGRRYGFVGPNGQGKTTLLKMIASRDLKIPPRIDVLYVEQEVVADA
TPAVEAVMRADKERWALVQEEKALLAALEQGPDEDKDARLAEVYEAMATI
GADGAEAKARRILYGLGFDEGMQVKPTQNFSGGWRMRISLARALFLEPTL
LMLDEPTNHLDLNAVIWLDDYLQKWKKTLLVVSHDQDFLNSVCDEILHLN
AKKIVQYKGNYDDFKEMEEQKRKEQQRAWEKQEKTLRALKAQGQSKNKAE
QTAKAKGGGRETGGAKKKKGDAVATGQESSEVKTLIERPREYTVRLEFPD
VARLSPPVVEVKDVAFRYPNSPWIFDKLNFGMDLDSRICIVGPNGSGKST
LLKLVTGALEPTKGEIRRNSKLRMGIYNQHFVDRLPMDKSPIEYLRSLFP
DETYQSVRNVLGRYGLQGHAHEIPIRDLSGGQKARVVFVELSLMAPHILF
LDEPTNNLDIETIDALCEAINEFNGGVVLVSHDARLIEASGCRVWIVGEN
RDVVQFPGEFEDYKKELLDKMEAHMAEEERRKEALALARKEKLAGRQVGA
GRAKK back to topmRNA from alignment at KK037250.1:90708..94506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8758 ID=rna8758|Name=rna8758|organism=Nannochloropsis gaditana|type=mRNA|length=3799bp|location=Sequence derived from alignment at KK037250.1:90708..94506- (Nannochloropsis gaditana)
GCTGAGGGGCGGTGCTGTTTAGTTGTGTAATGATATGTAGGCATTATTGT
TTTGATGACGTGAGGATGTCCGAGAGCTGTTGGACCTTGTGGAGCCACTG
TTGTCCCGGATTCTGTTCTTATCGCGGCTCTCTGTTGCGGAAGTGGCCTC
GCATCATTAGGCTGGGATTTGTTTTCATCTTATATCTCCACTGGTGCATT
TCCCAGGCAATAACGCCACAGTAGAACTCGTCTTGGTGTAGTGCTATGCC
GCCCAAAGGCAAGGGAAAGAAGGGAAAGCGCCGTGGAGATGTGAGCAGTG
ATGAAGACGATCATTTGCAAAGCTCCGCGTCCGGAGGCCCTACCCAATCT
GAACAAAAAGGGGGAGTAGGGGGAGATGCCGGGGCTTCAAAACGCGAAGC
GCTGAAGGCCAAGCGTGAGGCACGTAAGAAGAAAGGTGGAAATAGCCTGG
GCAAAAAGGGGACGCCAAGATCGGATGATGACGACCGTGACTCGGGAGAC
ATTCTAAAGATGGAAGACGCGCTTATCGATGATTCTGAAGAGGAAGAGGA
GTTGAAACACATCGCAAGTCTCTCAAAAGCAAGTAACCATAAGGGAAAAA
ACAAAGCCATTGCCTCCGTGCGCAGCAGTTTCGGGGCCTTGGATGATAGC
AGCGAGGATGACGAGGATGGAGGTGGCGGCGGTATGCATCCAGTCAAGCC
GTCGGCAGGCTTCGGAGCTCTTGGCGATAGCAGTAGCAGTGAGGGCAGTG
ACAGTGATGGGGCAGATGATGGAGCTGCGCCTCCGCCTGTACCTTTCTCG
GATCGGGGTCCTGTCTTGCTGGCCGATGAGGACTCGGACGAGGGCGGGCG
GCGCAAGAAGAAAGGGGGGAGAGAGAAAGCACTCCAACGTAAGCCCACAG
CCGAAAATGGCGAGGAGGTTTTGTCCCGACTCCCACCATCCCCTCCTGAG
ATCAAAAAAGCCGTCACTCCACCTCTGGAAGAGGAGCCTACATTTGCGAT
GGAGGAGGAGGAAGTAGCAGTGAAGGAGAAGAAGAAGAAGAAGAAGAAGA
AAGAGAGGGAAGAGCCTATGGAGGATTCGAGCGATGGAGACGATGAGGAG
AGCAAGAAGAAGAAGAAAAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAA
GGAGAAGAGGGAGAAGAAAGAGAAGAAAAAGGAGCGACAGAGTGGGAGCG
GTGCGGAGGAAGGGGAGGACGACCAGGGAGATGGCGATGACCTTTCCTCC
ATTTCAGCAGGCTTGGAGGCGGTGCGTATGTTAGCACCACCGTCTATACC
AGTCCCAGAGCCAGCATCGTCAAGCGTCACGTCACTACCTCTGCCTCAAG
GTCCCACGGGAGGGTCTTCGGCACCGGCGGCTCTGGAGGAGGAGAGCAAG
CCTATCCCCGGGCAGGGAGGAGGGAGCGTTGAGGTGGATGCACCCGCGAG
GCCGAAGAAGAAAGTGGATAAGTGGGCAGCAAAGCTTGCGGCAAGGGCGG
AGGAGGCGAGGAAGAAGAAAGAGGCGGAGTTGGCGAGTTTGGAGGCCCAG
GTGGCGGCGGAAGAGGCCAGACAGGCAGCAAGGCGCCAGGCAGTAGCGGA
GGAAGCTGCGGCTCGCGAAGCGGAAGAAGAAACACAGGACTATGGTGGTG
CAAATGCGGGGACAGCGGGGACGGAAATGGCTGGGAAAAGTTCCGGGGGC
GGGGGGGAGGGCGGGGGGGAGGGCGGGGGGAAAGGCGGGGAAGAGGACGC
TCGGTTTATGCACGACGAGGGATGGGTGGAGGACGTTGGGGGGGGGGAAT
CGAGCAGGTGGTGCGGGACTTGAAGGAGAAGCTGGCGGACTCCTCCCTTT
CAGGGAAGGCCAGGAAGCGCCTGGAGAAGGACCTGGGGGCGGCGGAGCGG
GAGCAAGAATACCAGAAGGCTGCGATCAAGGCCTCGGCAGAGGGCGGTCA
GTTTGCCTGCTCCCAGGCGGCGGTGAACGAGAACGACCCGCAATGGCAGA
ACGCCCTGGACATTAAGGTCCCGGACTTCTCCATCTCTGCCCACAACAAG
GAGCTGTTTCACAACTCCTCTCTCAGCATCGCCCACGGGCGCCGGTACGG
TTTCGTGGGGCCCAACGGTCAGGGTAAGACCACACTCTTGAAAATGATCG
CCTCCCGGGATTTGAAGATCCCGCCCCGCATCGACGTGCTCTACGTGGAG
CAGGAGGTGGTCGCCGACGCGACGCCTGCGGTGGAGGCAGTTATGCGGGC
GGACAAGGAACGGTGGGCGTTGGTGCAAGAGGAGAAGGCGCTGCTGGCGG
CCTTGGAGCAGGGGCCCGACGAGGACAAAGACGCCCGGTTGGCCGAAGTC
TACGAGGCGATGGCCACGATCGGCGCCGACGGAGCCGAGGCCAAGGCCCG
AAGGATCTTGTACGGGCTGGGCTTCGACGAGGGCATGCAGGTGAAGCCCA
CCCAGAACTTCAGTGGCGGGTGGCGCATGCGCATCTCCCTGGCCCGGGCC
CTGTTTTTGGAGCCGACCCTGCTCATGTTGGACGAACCCACGAACCATTT
GGACCTGAATGCGGTGATCTGGCTGGATGACTACTTGCAGAAATGGAAAA
AAACGCTGTTGGTGGTCTCACACGACCAGGATTTCCTGAACTCGGTGTGC
GACGAGATCCTTCACCTGAACGCCAAGAAAATCGTGCAGTACAAGGGAAA
CTATGACGACTTCAAGGAGATGGAGGAGCAGAAGCGAAAAGAACAGCAGC
GGGCGTGGGAGAAGCAAGAGAAGACGCTTCGAGCTTTGAAGGCGCAGGGG
CAGAGTAAGAACAAGGCCGAGCAGACGGCCAAGGCGAAAGGGGGGGGAAG
GGAGACCGGGGGCGCGAAAAAGAAGAAGGGGGACGCCGTGGCCACGGGAC
AGGAGTCGAGCGAGGTCAAGACTCTGATAGAGCGCCCTCGGGAATACACA
GTTCGTCTGGAGTTTCCGGACGTGGCGCGCTTGAGCCCTCCCGTGGTGGA
GGTAAAGGACGTTGCCTTCCGGTACCCGAACAGCCCCTGGATCTTCGACA
AGCTCAACTTCGGCATGGATTTGGACAGTCGCATTTGCATCGTGGGCCCC
AACGGTTCCGGCAAATCTACCTTGTTGAAGTTGGTAACGGGGGCCTTGGA
GCCGACCAAGGGAGAGATCCGCCGGAACTCGAAATTGCGGATGGGAATAT
ACAACCAGCATTTTGTGGACCGGCTGCCCATGGACAAGAGCCCCATAGAG
TATTTACGGAGCCTCTTCCCGGACGAGACGTACCAAAGCGTGCGGAATGT
GCTGGGTCGCTACGGGCTCCAAGGGCATGCGCACGAGATTCCCATCCGGG
ACTTGTCTGGCGGCCAGAAGGCCCGTGTAGTCTTTGTCGAGTTAAGTCTG
ATGGCCCCGCACATCTTATTTCTGGACGAGCCCACCAATAATTTGGACAT
TGAGACGATCGACGCGTTGTGCGAGGCGATCAACGAATTTAACGGGGGCG
TGGTGCTTGTCTCCCACGATGCCCGTCTGATCGAGGCAAGCGGGTGCCGT
GTTTGGATTGTCGGGGAGAACAGGGATGTGGTGCAGTTCCCGGGTGAGTT
TGAAGACTACAAAAAAGAACTCTTAGATAAGATGGAAGCGCATATGGCCG
AGGAAGAGAGACGGAAGGAGGCTCTGGCACTCGCAAGGAAAGAAAAATTG
GCCGGGCGTCAAGTCGGTGCAGGTCGAGCCAAAAAGTAGGGTCATAGAAG
GGGACTGTCATGAGTCTATCTAACAAAAGTCCAGAAGTTAACAACGTGA back to topCoding sequence (CDS) from alignment at KK037250.1:90708..94506- >rna8758 ID=rna8758|Name=rna8758|organism=Nannochloropsis gaditana|type=CDS|length=1968bp|location=Sequence derived from alignment at KK037250.1:90708..94506- (Nannochloropsis gaditana)
ATGGGTGGAGGACGTTGGGGGGGGGGAATCGAGCAGGTGGTGCGGGACTT
GAAGGAGAAGCTGGCGGACTCCTCCCTTTCAGGGAAGGCCAGGAAGCGCC
TGGAGAAGGACCTGGGGGCGGCGGAGCGGGAGCAAGAATACCAGAAGGCT
GCGATCAAGGCCTCGGCAGAGGGCGGTCAGTTTGCCTGCTCCCAGGCGGC
GGTGAACGAGAACGACCCGCAATGGCAGAACGCCCTGGACATTAAGGTCC
CGGACTTCTCCATCTCTGCCCACAACAAGGAGCTGTTTCACAACTCCTCT
CTCAGCATCGCCCACGGGCGCCGGTACGGTTTCGTGGGGCCCAACGGTCA
GGGTAAGACCACACTCTTGAAAATGATCGCCTCCCGGGATTTGAAGATCC
CGCCCCGCATCGACGTGCTCTACGTGGAGCAGGAGGTGGTCGCCGACGCG
ACGCCTGCGGTGGAGGCAGTTATGCGGGCGGACAAGGAACGGTGGGCGTT
GGTGCAAGAGGAGAAGGCGCTGCTGGCGGCCTTGGAGCAGGGGCCCGACG
AGGACAAAGACGCCCGGTTGGCCGAAGTCTACGAGGCGATGGCCACGATC
GGCGCCGACGGAGCCGAGGCCAAGGCCCGAAGGATCTTGTACGGGCTGGG
CTTCGACGAGGGCATGCAGGTGAAGCCCACCCAGAACTTCAGTGGCGGGT
GGCGCATGCGCATCTCCCTGGCCCGGGCCCTGTTTTTGGAGCCGACCCTG
CTCATGTTGGACGAACCCACGAACCATTTGGACCTGAATGCGGTGATCTG
GCTGGATGACTACTTGCAGAAATGGAAAAAAACGCTGTTGGTGGTCTCAC
ACGACCAGGATTTCCTGAACTCGGTGTGCGACGAGATCCTTCACCTGAAC
GCCAAGAAAATCGTGCAGTACAAGGGAAACTATGACGACTTCAAGGAGAT
GGAGGAGCAGAAGCGAAAAGAACAGCAGCGGGCGTGGGAGAAGCAAGAGA
AGACGCTTCGAGCTTTGAAGGCGCAGGGGCAGAGTAAGAACAAGGCCGAG
CAGACGGCCAAGGCGAAAGGGGGGGGAAGGGAGACCGGGGGCGCGAAAAA
GAAGAAGGGGGACGCCGTGGCCACGGGACAGGAGTCGAGCGAGGTCAAGA
CTCTGATAGAGCGCCCTCGGGAATACACAGTTCGTCTGGAGTTTCCGGAC
GTGGCGCGCTTGAGCCCTCCCGTGGTGGAGGTAAAGGACGTTGCCTTCCG
GTACCCGAACAGCCCCTGGATCTTCGACAAGCTCAACTTCGGCATGGATT
TGGACAGTCGCATTTGCATCGTGGGCCCCAACGGTTCCGGCAAATCTACC
TTGTTGAAGTTGGTAACGGGGGCCTTGGAGCCGACCAAGGGAGAGATCCG
CCGGAACTCGAAATTGCGGATGGGAATATACAACCAGCATTTTGTGGACC
GGCTGCCCATGGACAAGAGCCCCATAGAGTATTTACGGAGCCTCTTCCCG
GACGAGACGTACCAAAGCGTGCGGAATGTGCTGGGTCGCTACGGGCTCCA
AGGGCATGCGCACGAGATTCCCATCCGGGACTTGTCTGGCGGCCAGAAGG
CCCGTGTAGTCTTTGTCGAGTTAAGTCTGATGGCCCCGCACATCTTATTT
CTGGACGAGCCCACCAATAATTTGGACATTGAGACGATCGACGCGTTGTG
CGAGGCGATCAACGAATTTAACGGGGGCGTGGTGCTTGTCTCCCACGATG
CCCGTCTGATCGAGGCAAGCGGGTGCCGTGTTTGGATTGTCGGGGAGAAC
AGGGATGTGGTGCAGTTCCCGGGTGAGTTTGAAGACTACAAAAAAGAACT
CTTAGATAAGATGGAAGCGCATATGGCCGAGGAAGAGAGACGGAAGGAGG
CTCTGGCACTCGCAAGGAAAGAAAAATTGGCCGGGCGTCAAGTCGGTGCA
GGTCGAGCCAAAAAGTAG back to top
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