rna8755, rna8755 (mRNA) Nannochloropsis gaditana

Overview
Namerna8755
Unique Namerna8755
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1161
Alignment locationKK037250.1:83437..85784 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100157g8.53.mrna
Orig protein idgnl|cribi|Naga_100157g8.53
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:83437..85784 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100157g8gene8487Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21950.1cds8725Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8755rna8755-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8755 ID=rna8755|Name=rna8755|organism=Nannochloropsis gaditana|type=mRNA|length=1161bp
ACCTCTTACCTTGGGTTTATCTCATGTATATCTTCAGGAAAACTTCACAC
CCATGGCTTCCCGTCTGGTCCATGTCTCTCTGGCCCTTGGTACAACACTC
CTCATCCTCTGCCTTAGTATGACCATGGTCGGCGCTCTGAAGGACACTGT
GAAAAATCGTATGAAGCTGGCCGATCAATACATCTTTGAGAATCCCGTGG
AAGAGAATATGGAGGGGATGGCACGTCAACACATGCTCAAGATGCCAGAT
CCTAAGGAGCGTGAGCAGCTTATGCGCAATTTGGAAACGTTGGACATGGA
CCATGTCCGACGGATTACGCGCCACGCCATGGTCAAGCACTTCACGACGG
AGGAGTTGGAGTTCCTTATCAACATGTACAGCACCAGCGTGGGAAAGTCG
GTCATGGCCAAGATTGGCGCTTACTCTGCCGAACTGGGACCGCAGATTCA
AGAGGTGATGATGCCTGTGATGGAGAGCAACGTCGAGTTCTACCAGGAGC
AGGAGAGGCGGGCGAAGAGGGGGGAGCTGAACGATCTCCCCGAAACGATC
AAACTACCCCCTCAGAGCCAGAAGCTCAAGGACGGGGTCTACATGGGGAA
CGGCCTGTCCAACGCTCAAAGGGAGGAAATGTAGGACTTCTTCCCCGTCA
GAAACGAGTGTCAAAATCTTGGATGGGCCAGACATGTAAGGACCCCACGA
AAAGACGCGTAGATAGGCCGGGAACGAAGAGATCGTGGAGGGGGGTCGGT
CAAGAGGGCAGTTGTGGGGGGCCTTCAATCCAGGGTCCCGGACGAAGGGA
GAAAGCGGGACGATAGACGACGCGAGAGTGGGTTAAGAGTACGAGCGCAG
CTTGCTTGGATACCTCGCCTTCCATTTCTTGTCCCACTCCCTTGTGGAAA
TCAGGGGAAGGCTTTGCATGTGCGTGGGAAGAGGTGTGAGGCGGGAGGAG
CGGACTCGTCCCTGTGGCTGGACACAGGGGTACCGGGCAAGCTGGGGGGG
CTCTCCTGCGCCTCGCCCGGTCGTGAAGGGGGTGGGATTTTAGTAGGAAA
ATGTACTCAAACATGATGGAGACGTGCTGGGCCAATGCAATGCGTAACGT
AATCAGGAAAAAAAGTAACGAACCCCTCGACCGAGAAAGCCTTGGCATAA
GGGCCATCTTG
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protein sequence of rna8755

>rna8755-protein ID=rna8755-protein|Name=rna8755|organism=Nannochloropsis gaditana|type=polypeptide|length=508bp
MINFQSGGGAVAFKAPPVVAAIVTPAHRKPRTRNPPKTTVMNRLPRPALS
QLHPSHPLRKEVFKVYKWMGNFLESLRPLDLAESTVASYFKALALLLGYR
DREQGKSRRYAPMGEEEAAAEEKMSLKDDAPVTLTDIGDVRKFSDAVAEL
REYIQQRRDARGLRSDYAGKRYTPVCKHLASFLAATQRKLIAEAAELPGH
GVGEVRGSLRREQGEHSHERRAGTVITRHQSSKDRGGNGNAREDEAGSGG
SQGEGGQGEKESERKRQCVASTVGNRREEYGEEEMESLKLNAQIEVGQIW
DRRRAGEGEGVGGGEVKAEGGKEAGTEGTEAREDRELKRLREALAQNTQQ
KKALEIRVEKMSRKLDRRTKKIRRLKEEKASVKAALDQAQARLEGERQER
MRRMEEELEFLRRGQDRQQGGGGTPNPASSSVSAPLPALPPKATAFTPTP
CSPSLDSRLSSVPFADSSPRSPSPGLCCLHPRTATASSSGSMECLQQTQR
QKNSDGNE
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mRNA from alignment at KK037250.1:83437..85784-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8755 ID=rna8755|Name=rna8755|organism=Nannochloropsis gaditana|type=mRNA|length=2348bp|location=Sequence derived from alignment at KK037250.1:83437..85784- (Nannochloropsis gaditana)
GACAAGGCGAAAAAGACGCGAAACAGGAACACACGGCTTCTGGTGTCCCC
ACACGGCAATGTAGGTCAAATTGACAAGCTGACATTCCCTACTTCGAATC
ATTACTTCGTAAACAGGGGTGAATCACAGGACCACGGCATGGCAGGTATT
TCCTCGATATGCCCGTAGTTAGACGCCGACCGATACACGAGTTTTCCAGC
CACCGTGCCGGTCGCCGTGCCGTACAAGGCATAAGTTGGCATTGCAAAGT
TGCCCTGCCTGTATCAGGTGACCTTGCACACGCATCGGTGTCGACATGAT
CAATTTTCAATCAGGTGGAGGGGCAGTTGCATTCAAAGCTCCCCCTGTGG
TGGCGGCAATCGTCACTCCAGCTCATCGCAAGCCACGCACCCGAAACCCC
CCGAAGACAACTGTGATGAATCGACTACCTCGTCCTGCCCTCTCCCAGCT
TCACCCTTCGCATCCACTCCGTAAAGAGGTGTTTAAGGTTTACAAATGGA
TGGGAAATTTCCTAGAGTCGCTTCGGCCATTGGACTTAGCGGAGAGCACC
GTGGCGAGTTACTTCAAAGCCCTGGCTCTTTTGTTGGGTTACCGCGACCG
AGAGCAGGGCAAGAGCCGCCGGTACGCGCCTATGGGAGAGGAAGAGGCAG
CTGCGGAGGAGAAAATGAGCCTGAAAGACGACGCCCCTGTCACCCTGACG
GACATAGGGGACGTGAGGAAATTCTCGGACGCGGTCGCCGAGCTGCGGGA
GTACATACAACAGCGGCGCGATGCCCGCGGCTTAAGGTCCGACTACGCAG
GCAAGAGGTACACTCCTGTGTGCAAGCACTTGGCATCGTTTCTGGCGGCG
ACGCAAAGGAAGCTGATCGCCGAGGCGGCCGAGCTCCCCGGGCATGGTGT
GGGGGAGGTTCGGGGCTCTCTCCGGCGGGAGCAGGGCGAGCACAGCCATG
AGAGGCGTGCTGGCACGGTCATTACGCGTCATCAAAGCAGCAAAGATCGT
GGTGGAAACGGAAATGCGCGTGAAGATGAGGCCGGGAGCGGAGGGTCCCA
GGGGGAGGGTGGCCAGGGAGAGAAGGAGAGTGAGAGAAAGAGACAGTGTG
TGGCCTCCACCGTCGGAAACAGGAGGGAGGAATATGGGGAGGAAGAGATG
GAGAGCTTGAAGTTGAATGCTCAAATCGAAGTGGGACAGATTTGGGATAG
GCGGAGAGCTGGGGAGGGCGAGGGCGTGGGAGGTGGCGAGGTCAAGGCAG
AGGGAGGGAAGGAGGCAGGGACGGAGGGGACGGAGGCACGGGAAGACCGA
GAACTGAAGCGACTGAGGGAGGCGCTGGCTCAGAACACTCAGCAAAAGAA
AGCCCTGGAAATACGCGTGGAAAAAATGTCGCGAAAGCTGGATCGACGGA
CAAAAAAGATACGGCGATTGAAGGAGGAGAAGGCGAGCGTCAAGGCAGCC
CTGGACCAGGCACAGGCTCGGCTCGAGGGGGAGCGGCAAGAGCGAATGCG
GAGGATGGAGGAAGAGCTGGAATTTTTGCGACGAGGACAGGACAGGCAGC
AGGGAGGGGGGGGCACGCCCAATCCGGCGTCGTCTTCTGTTTCCGCGCCG
CTTCCCGCTCTTCCGCCCAAAGCGACCGCCTTTACTCCAACCCCTTGTTC
TCCTTCCCTTGATTCCCGCCTCTCCTCCGTCCCCTTCGCCGATTCTTCCC
CTCGCTCGCCCTCTCCTGGCTTGTGCTGCCTCCATCCTCGCACCGCCACG
GCCTCCTCCAGTGGCTCAATGGAATGCTTACAGCAGACTCAGCGCCAAAA
AAACTCCGACGGCAACGAGTGATCTCCTCCCAAGCAATTATTGGTCTCTC
AATTGGCGTTCCGTGAGTGAGTCAAGCCACCTTGCCAGCGACAGACTACG
GGTGTCAGAATCCTGGAGTTGCAGCACACAGGCACGCGCCACTCGCATGA
TCCTTGTCCTCGTATTCGCCGGTGCCTCTCGCCTTATCTCCCGGAAAACG
AACATGGAAGCCACTGGTATAAATCAATTTGCGTTGTTTCGAGGCAGCTA
AGGATTAATAAGCCGCTCGGCTAAGCGCTCCCGAGTCATGAGAAGCCCCC
CTTGGGGACGAGATTTGAGGGGAAAGAGGAAGCGCACAAAAAGCAACAAG
GTACACCGAAGGACCGTGTTGCAAACCGGACGGTGTAGGAGGAGATAGAC
TTAGTTAGTGGGTGAGGGTGTTTGGCGTCTAGTGGATGTAAACTCAAGGT
AATGGGTTTTATTTGAATGCTTCGGCGCGAGAAACTATATGTAGAGACGG
CGAAATTTAAAACCGAAACTTTAATTCTTTAACATATGTCACCTTTTT
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Coding sequence (CDS) from alignment at KK037250.1:83437..85784-

>rna8755 ID=rna8755|Name=rna8755|organism=Nannochloropsis gaditana|type=CDS|length=1527bp|location=Sequence derived from alignment at KK037250.1:83437..85784- (Nannochloropsis gaditana)
ATGATCAATTTTCAATCAGGTGGAGGGGCAGTTGCATTCAAAGCTCCCCC
TGTGGTGGCGGCAATCGTCACTCCAGCTCATCGCAAGCCACGCACCCGAA
ACCCCCCGAAGACAACTGTGATGAATCGACTACCTCGTCCTGCCCTCTCC
CAGCTTCACCCTTCGCATCCACTCCGTAAAGAGGTGTTTAAGGTTTACAA
ATGGATGGGAAATTTCCTAGAGTCGCTTCGGCCATTGGACTTAGCGGAGA
GCACCGTGGCGAGTTACTTCAAAGCCCTGGCTCTTTTGTTGGGTTACCGC
GACCGAGAGCAGGGCAAGAGCCGCCGGTACGCGCCTATGGGAGAGGAAGA
GGCAGCTGCGGAGGAGAAAATGAGCCTGAAAGACGACGCCCCTGTCACCC
TGACGGACATAGGGGACGTGAGGAAATTCTCGGACGCGGTCGCCGAGCTG
CGGGAGTACATACAACAGCGGCGCGATGCCCGCGGCTTAAGGTCCGACTA
CGCAGGCAAGAGGTACACTCCTGTGTGCAAGCACTTGGCATCGTTTCTGG
CGGCGACGCAAAGGAAGCTGATCGCCGAGGCGGCCGAGCTCCCCGGGCAT
GGTGTGGGGGAGGTTCGGGGCTCTCTCCGGCGGGAGCAGGGCGAGCACAG
CCATGAGAGGCGTGCTGGCACGGTCATTACGCGTCATCAAAGCAGCAAAG
ATCGTGGTGGAAACGGAAATGCGCGTGAAGATGAGGCCGGGAGCGGAGGG
TCCCAGGGGGAGGGTGGCCAGGGAGAGAAGGAGAGTGAGAGAAAGAGACA
GTGTGTGGCCTCCACCGTCGGAAACAGGAGGGAGGAATATGGGGAGGAAG
AGATGGAGAGCTTGAAGTTGAATGCTCAAATCGAAGTGGGACAGATTTGG
GATAGGCGGAGAGCTGGGGAGGGCGAGGGCGTGGGAGGTGGCGAGGTCAA
GGCAGAGGGAGGGAAGGAGGCAGGGACGGAGGGGACGGAGGCACGGGAAG
ACCGAGAACTGAAGCGACTGAGGGAGGCGCTGGCTCAGAACACTCAGCAA
AAGAAAGCCCTGGAAATACGCGTGGAAAAAATGTCGCGAAAGCTGGATCG
ACGGACAAAAAAGATACGGCGATTGAAGGAGGAGAAGGCGAGCGTCAAGG
CAGCCCTGGACCAGGCACAGGCTCGGCTCGAGGGGGAGCGGCAAGAGCGA
ATGCGGAGGATGGAGGAAGAGCTGGAATTTTTGCGACGAGGACAGGACAG
GCAGCAGGGAGGGGGGGGCACGCCCAATCCGGCGTCGTCTTCTGTTTCCG
CGCCGCTTCCCGCTCTTCCGCCCAAAGCGACCGCCTTTACTCCAACCCCT
TGTTCTCCTTCCCTTGATTCCCGCCTCTCCTCCGTCCCCTTCGCCGATTC
TTCCCCTCGCTCGCCCTCTCCTGGCTTGTGCTGCCTCCATCCTCGCACCG
CCACGGCCTCCTCCAGTGGCTCAATGGAATGCTTACAGCAGACTCAGCGC
CAAAAAAACTCCGACGGCAACGAGTGA
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Synonyms
Publications