rna8743, rna8743 (mRNA) Nannochloropsis gaditana

Overview
Namerna8743
Unique Namerna8743
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:52658..53371 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101140g1.9849.mrna
Orig protein idgnl|cribi|Naga_101140g1.9849
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:52658..53371 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101140g1gene8475Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21961.1cds8713Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8743rna8743-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

protein sequence of rna8743

>rna8743-protein ID=rna8743-protein|Name=rna8743|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
PPPLFPRPQACKGSSSRSCGSSLMISLSQRLTCREGEKEGGREGARERGA
FMCRDAEEWVGERFQLRDEKRKRNGGVCDGWCSRKRRRSKGEVSPWIWIE
EWERRNAVTTAGSPAVPATKSKKAPCLLVKIKRKAGQRVAPGKLEDETSR
T
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mRNA from alignment at KK037250.1:52658..53371-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8743 ID=rna8743|Name=rna8743|organism=Nannochloropsis gaditana|type=mRNA|length=714bp|location=Sequence derived from alignment at KK037250.1:52658..53371- (Nannochloropsis gaditana)
CCCCCCCCCCTCTTCCCTCGCCCACAGGCTTGCAAGGGCTCGTCTTCTCG
GTCTTGTGGAAGCTCATTGATGATCAGCTTAAGTCAAAGGCTCACATGTA
GGGAGGGAGAGAAGGAGGGAGGGAGGGAGGGAGCGAGGGAGCGAGGGGCA
TTCATGTGCAGAGACGCGGAGGAGTGGGTGGGGGAAAGGTTTCAATTGCG
GGACGAGAAACGAAAGAGAAATGGGGGTGTGTGTGACGGATGGTGTTCTC
GTAAACGAAGAAGAAGCAAGGGAGAGGTGAGTCCTTGGATATGGATAGAG
GAGTGGGAGAGGAGAAATGCGGTGACAACAGCCGGATCGCCTGCTGTTCC
GGCCACGAAAAGCAAGAAAGCGCCGTGTTTGTTGGTCAAAATAAAAAGAA
AAGCAGGACAGAGAGTTGCTCCTGGGAAGTTGGAAGATGAAACGAGCAGG
ACGTGAGGAGGGGGTAGAGAGGCGGTATCATCACTCAGGTGGGGGCCGTG
AAGTGTCTTTCGGAAGATCGTGGGGTCAGGAGGCGTTCTGCACTAACACT
GCACAAGAAAGTAGAACAAGGAGGGAAAAAAATACAGAATGCACTGGATT
GTGTTCTCAGCTTGTGTGTCGTCTCATTACTTGTCCCGTGGCTCTGAGGT
TGATAAATATAAAAACTTGCACGCCTTTTCGCGCCAACAAGGGGATGACG
TGCGAATAACTATG
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Coding sequence (CDS) from alignment at KK037250.1:52658..53371-

>rna8743 ID=rna8743|Name=rna8743|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at KK037250.1:52658..53371- (Nannochloropsis gaditana)
CCCCCCCCCCTCTTCCCTCGCCCACAGGCTTGCAAGGGCTCGTCTTCTCG
GTCTTGTGGAAGCTCATTGATGATCAGCTTAAGTCAAAGGCTCACATGTA
GGGAGGGAGAGAAGGAGGGAGGGAGGGAGGGAGCGAGGGAGCGAGGGGCA
TTCATGTGCAGAGACGCGGAGGAGTGGGTGGGGGAAAGGTTTCAATTGCG
GGACGAGAAACGAAAGAGAAATGGGGGTGTGTGTGACGGATGGTGTTCTC
GTAAACGAAGAAGAAGCAAGGGAGAGGTGAGTCCTTGGATATGGATAGAG
GAGTGGGAGAGGAGAAATGCGGTGACAACAGCCGGATCGCCTGCTGTTCC
GGCCACGAAAAGCAAGAAAGCGCCGTGTTTGTTGGTCAAAATAAAAAGAA
AAGCAGGACAGAGAGTTGCTCCTGGGAAGTTGGAAGATGAAACGAGCAGG
ACGTGA
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Synonyms
Publications