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Properties
Property Name | Value |
Product | sodium hydrogen exchanger 8 |
Orig transcript id | gnl|cribi|Naga_100823g1.4720.mrna |
Orig protein id | gnl|cribi|Naga_100823g1.4720 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037250.1 | supercontig | KK037250.1:45263..47545 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8737 ID=rna8737|Name=rna8737|organism=Nannochloropsis gaditana|type=mRNA|length=1891bp GAAGAATTGTTGAGGTCGCTGTGGTGGGTGGTGGCGGCCCTGGAGTTGAA GCAAGAGGGTGGGAGGGAGGGCGGGGAGGAGGGCGGGAGGGAGGGCGGGA GGGAGGGCGTCGCTCTCCAGGAATGCTCGCTGGCACAACTGGCGTCTCTT TTGGGCGAGGCGACGCTTTTGCACCTCCCTGAAGGTGGACAGGGAGGGAG GGAGGGAGGGAGGGAGACTATGCGCCGGATGAACCTGAGGACGCTGACAA GGGGGGGGACCTTGAGGAACTTGCTGCCTCTGACCGGACGGGTGCCGAAC GAGGGAGGGAGGGAGGGTGGGAGGGAGGGAAAGAAGGATGGATTGGTGGA GATGACGATGGGGGCGCCCGGGACGTCTTTGGCAAGTCAGTTCCAGGAAG CCTTGCAGCAGCAACAACAGCAACCACAGCAACCGCAACAGCAACAGCAG CTGCACGAGGTGTTTGAAGCCGATGCGACCAGCCACCTGGTGCTTTTGAC CGGGTGGATGGAGCGGGTGCATGCTGGGGGCCAGGACGAGGCGGGGAAAG GGAAGGAGAGGGAGAGACGTCCTCCCCTTTGGGGAGGTCGGGTACGAGAG AGGGAGGGAGGGAAGGAGGAGAAGGAGAAGAAGGGCCCGGGGGGGGTCAC TGGAGCCTTGACAGCCATTTTGAGCACGGTGGGCGGGGCAGGGGGGGGAA AGGGAGGGACAGGCGAGGGCGGGCACGGGGAAGGCAGAGATGGCGGAGAC AGTGGGACAAGGTCGCCGGCGATGCCTCTCGTGGCGCCCCCCACGGTGGT GGTCCCCTACCTCCCTGCTGGCCGTTACACGCTGGCGCCCGGAACCGTGG CCTTCGTCTTACCCGAGAGTAAATGCCGACTGGTCCGGCAACAGGTGCAG CGTAGGTCCCCTCACACAGAGTCGGCGCCTCCGAAGGAGGAGGAGGAAGG AGGGGATGAGGGAGAAGGGGAGGCCGAGGGTGGAGAGCGCGGGGGCAGGA GCCTATTGGGAAAGGAAGGGGAGGGACTGATCCGTCAGCGGTTCACGAAA GCCGCCTCGGTGGGATCCAGGCATCCACCGGCTGCGCGCCAATCTCCTTC TCAGCCCGACACGCCCCTGCTCTCGGTCCATTTTCGGTCCTACACGGGCT CCCCGGAGGGGGGGAAGGCGGGAGGGTTGGGGGGAGGTGCAGGTGCTCTG AAGCCACGCCGGTCGCTTTCGCATGCTGCGGGTGGGCAGCATCATCGCAC CATTGGAGGTTACAATTTGGTGGACCCGTTGCCCTTTGATAGGAGCGGGG AAAAAGGCAACCCGGAAGAAGACGTGGCGGAGGAGCAGCCGCCATGGCAA GAAGCTGAGGAGGAAAGCGGGTTGAGGATGCGACGACGCCGACCTTCGCC TCCGCTGGGCATTGTGGGTGCCCCCATGGCATTGTACGGCAATTCTCCTC TAGCGGGGTCGGCAGGGGGTTTTGAAAGTAGTGAGCTGAGGAGAAGGAAC AGCGCATCATCGGATCAGGGGAGGGAAGGAGATGGACGCGGGAATAGGGA TGGAGGAGGGGACATGGACGCCGCGGAGTCGACTGAAATTCGTCTGAGCC GAAGTCTCTCAAAAAGCGGGGGTTCTAAGGGAGTGTGAGGTGGACATGGA TGTGAAGAGCAGCGATGGGAATAGAAGGAAGAAGGCGGAAAATGATGAGG CGCAGGAAGCGTGCATGCAGCACCGAGAGGGATAGACGGAGAAATAGAAG AGAAAATTACCGAACAGAAGCATGGAAATTTCAAAATTTCGTTGATGTAT GTGTACATGGAAAGCACCGACGCGAAAAATTGTCAGGGGACAAAAACCAG GGTGATAGATGAAGACGATAGGGTTCAGTATAGAGATGAGG back to topprotein sequence of rna8737 >rna8737-protein ID=rna8737-protein|Name=rna8737|organism=Nannochloropsis gaditana|type=polypeptide|length=662bp MADFTEHSDPHPSSSADVGMGTFVMALTLGIIARAYLSSLIRLPYTCLVL IFGLLYGFIIYTEVGITGSDIFSRSADLWINISPEAILTVILPILIFGSS FASDLHLFLQQLTPVLTLAGPAVLVNTALLGLTAKYVLPYGWDWATSFMV GSMLSATDPVAVVAILKELGVVESLSILIDGESLLNDGFAIVLYTIFSRL VLHEETFSPLETLEAAVTLCLGGPAIGVVVGAATSYILGTLINDSASEIT VTILCGYGAYLLAELAEASGVLSMVVAGLYLSFHSVGRISARVTRSLTSF WAMAAFITETIIFFVSGLIMAEKALVSETILPRDWGYLFLFYLILNATRF VGVFLFFPTLARGPYGINWRQAVLLSYGGLRGAVSLTLALVVSQEEGIPE ETRALILFFTAGIVLLTILINGSTCKLVLQKLKLNNPTRVEQELYIRAMN LIENELEVFAGKLKNDKYLGSADWNVVYRYLPVFSPQIYWHRVREGHICL DEAEIALVGRYVRENERQEKKGKEEGGGFSDEEGGAGLGRAEENGAALGP QKSFFGSFLFRPFACVLSVMGYKPGKDGGGGEEECSYEELPTGLRRRWRE YTSRFNGNLNTGVDGEMLCAIRKKVWQGVWAGRCCGEEGMEERMEGGREG GEASGQLRGAFG back to topmRNA from alignment at KK037250.1:45263..47545+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8737 ID=rna8737|Name=rna8737|organism=Nannochloropsis gaditana|type=mRNA|length=2283bp|location=Sequence derived from alignment at KK037250.1:45263..47545+ (Nannochloropsis gaditana) ATGGCAGATTTTACAGAGCACTCGGATCCacatccatcctcctctgcggA
TGTGGGTATGGGGACTTTCGTGATGGCCCTGACTCTGGGAATCATCGCCC
GGGCCTATCTGTCTTCCCTGATCCGTCTCCCGTACACgtgcctcgtcctc
atcttcggACTTCTCTATGGCTTTATTATCTACACGGAAGTCGGGATCAC
GGGATCAGACATCTTCAGTCGATCCGCAGACCTGTGGATCAATATCTCGC
CCGAAGCTATCTTGACGGTGATCCTGCCTATCCTGATCTTCGGTTCGTCC
TTCGCCAGTGACCTTCACCTGTTCTTGCAGCAGCTGACTCCTGTGTTGAC
GCTTGCCGGGCCTGCTGTGCTTGTCAATACAGCATTGCTGGGGCTGACGG
CCAAATACGTGCTACCGTACGGTTGGGACTGGGCCACATCCTTCATGGTA
GGGTCGATGCTGTCAGCGACAGACCCtgtggccgtggtggcgatATTGAA
GGAGCTGGGAGTGGTGGAAAGCCTGTCCATCCTGATCGACGGGGAGAGCT
TGCTGAACGACGGCTTTGCCATCGTCCTGTACACGATATTCAGCCGACTC
GTTCTGCACGAAGAGACCTTCTCGCCGTTGGAGACGTTGGAGGCGGCCGT
TACTCTCTGTCTGGGCGGGCCGGCCATTGGGGTGGTGGTAGGGGCCGCCA
CAAGCTACATCCTCGGCACGCTCATCAACGACTCCGCCTCTGAAATTACC
GGTGCGTTTTTAAAACACCAGGTCTTATGAGTCAGCGGAGGGGAACGGGC
GGGGCAATcgcgtccttgtcctccatgaGGCCCGGAAGGGGACTCTGGCT
CTCTCCCACGAGCAACTCACCAAAccctcctcatttcctcccttttccag
tGACCATCCTCTGCGGCTACGGTGCCTACCTCCTTGCCGAGCTCGCCGAA
GCTTCGGGTGTCCTCTCCATGGTGGTGGCTGGTCtctacctctccttcca
cagcGTCGGCCGTATCTCCGCCCGGGTCACCCGGTCATTGACCTCCTTCt
gggccatggcggccttCATTACCGAGACCATCATTTTCTTTGTCAGCGGC
TTGAtcatggcggagaaagccttgGTCTCAGAGACTATCTTGCCGCGCGA
CTGGggctacctcttcctcttctatcTCATCCTGAACGCTACCCGCTTCG
TCGGggttttcctcttcttccccaccttaGCCCGTGGTCCCTACGGTATC
AATTGGCGCCAAGCCGTTCTGCTCTCGTACGGAGGATTGCGGGGTGCAGT
CTCCTTAACTTTGGCCTTGGTCGTGAGTCAGGAAGAGGGAATTCCGGAGG
AAACCCGCGcactcatcctcttcttcacggCTGGCATTGTCCTTCTGACC
ATATTGATCAACGGTTCTACTTGCAAGCTCGTGCTTCAGAAGCTCAAGCT
GAACAATCCTACCCGGGTGGAGCAGGAACTTTACATTCGCGCCATGAACC
TGATCGAAAACGAGCTCGAGGTCTTCGCAGGGAAGCTTAAGAACGATAAG
TATCTGGGGAGTGCGGATTGGAACGTGGTTTATCGTTATCTGCCCGTGTT
CTCGCCGCAAATCTATTGGCACCGTGTAAGGGAAGGGCACATTTGtctgg
acgaggcagagatTGCCTTGGTGGGCCGGTACGTGCGGGAAAATGAGCGt
caggagaaaaaagggaaggaagaaggggggggcttcagcgatgaggaggg
gggcgcaGGTCTTGGCAGAGCGGAGGAGAACGGGGCGGCCCTTGGACCCC
AAAAGTCGTTCTTTGGGAGCTTTCTCTTTCGACCCTTCGCCTGCGTTCTC
TCCGTGATGGGCTACAAACCTggcaaggacggagggggaggggaagagga
gtgCAGCTACGAGGAGCTTCCCACCGGCCTTCGTCGCCGCTGGCGAGAGT
ACACGAGCCGGTTCAACGGAAATTTGAACACCGGGGTCGATGGCGAGATG
CTATGTGCGATTCGGAAAAAGGTGTGGCAGGGTTTGGTGGGGACGCGGGG
AGGGATACCTGGCGCgcgtcctgctcttcctcccgccctccctccctccc
gccctcccccctccaagccTACGGCTACGGACAGCGACTCAatggagggt
ggaaaggcgCGCATGATCCGAAGCAGGAGTTTGGGCGGGGCGATgctgcg
gggaggaggggatggaggaaaggatggagggcgggagggagggcggggag
gcgagTGGTCAGCTCCGGGGAGCCTTCGGGTGA back to topCoding sequence (CDS) from alignment at KK037250.1:45263..47545+ >rna8737 ID=rna8737|Name=rna8737|organism=Nannochloropsis gaditana|type=CDS|length=5967bp|location=Sequence derived from alignment at KK037250.1:45263..47545+ (Nannochloropsis gaditana) ATGGCAGATTTTACAGAGCACTCGGATCCacatccatcctcctctgcggA TGTGGGTATGGGGACTTTCGTGATGGCCCTGACTCTGGGAATCATCGCCC GGGCCTATCTGTCTTCCCTGATCCGTCTCCCGTACACgtgcctcgtcctc atcttcggACTTCTCTATGGCTTTATTATCTACACGGAAGTCGGGATCAC GGGATCAGACATCTTCAGTCGATCCGCAGACCTGTGGATCAATATCTCGC CCGAAGCTATCTTGACGGTGATCCTGCCTATCCTGATCTTCGGTTCGTCC TTCGCCAGTGACCTTCACCTGTTCTTGCAGCAGCTGACTCCTGTGTTGAC GCTTGCCGGGCCTGCTGTGCTTGTCAATACAGCATTGCTGGGGCTGACGG CCAAATACGTGCTACCGTACGGTTGGGACTGGGCCACATCCTTCATGGTA GGGTCGATGCTGTCAGCGACAGACCCtgtggccgtggtggcgatATTGAA GGAGCTGGGAGTGGTGGAAAGCCTGTCCATCCTGATCGACGGGGAGAGCT TGCTGAACGACGGCTTTGCCATCGTCCTGTACACGATATTCAGCCGACTC GTTCTGCACGAAGAGACCTTCTCGCCGTTGGAGACGTTGGAGGCGGCCGT TACTCTCTGTCTGGGCGGGCCGGCCATTGGGGTGGTGGTAGGGGCCGCCA CAAGCTACATCCTCGGCACGCTCATCAACGACTCCGCCTCTGAAATTACC GtGACCATCCTCTGCGGCTACGGTGCCTACCTCCTTGCCGAGCTCGCCGA AGCTTCGGGTGTCCTCTCCATGGTGGTGGCTGGTCtctacctctccttcc acagcGTCGGCCGTATCTCCGCCCGGGTCACCCGGTCATTGACCTCCTTC tgggccatggcggccttCATTACCGAGACCATCATTTTCTTTGTCAGCGG CTTGAtcatggcggagaaagccttgGTCTCAGAGACTATCTTGCCGCGCG ACTGGggctacctcttcctcttctatcTCATCCTGAACGCTACCCGCTTC GTCGGggttttcctcttcttccccaccttaGCCCGTGGTCCCTACGGTAT CAATTGGCGCCAAGCCGTTCTGCTCTCGTACGGAGGATTGCGGGGTGCAG TCTCCTTAACTTTGGCCTTGGTCGTGAGTCAGGAAGAGGGAATTCCGGAG GAAACCCGCGcactcatcctcttcttcacggCTGGCATTGTCCTTCTGAC CATATTGATCAACGGTTCTACTTGCAAGCTCGTGCTTCAGAAGCTCAAGC TGAACAATCCTACCCGGGTGGAGCAGGAACTTTACATTCGCGCCATGAAC CTGATCGAAAACGAGCTCGAGGTCTTCGCAGGGAAGCTTAAGAACGATAA GTATCTGGGGAGTGCGGATTGGAACGTGGTTTATCGTTATCTGCCCGTGT TCTCGCCGCAAATCTATTGGCACCGTGTAAGGGAAGGGCACATTTGtctg gacgaggcagagatTGCCTTGGTGGGCCGGTACGTGCGGGAAAATGAGCG tcaggagaaaaaagggaaggaagaaggggggggcttcagcgatgaggagg ggggcgcaGGTCTTGGCAGAGCGGAGGAGAACGGGGCGGCCCTTGGACCC CAAAAGTCGTTCTTTGGGAGCTTTCTCTTTCGACCCTTCGCCTGCGTTCT CTCCGTGATGGGCTACAAACCTggcaaggacggagggggaggggaagagg agtgCAGCTACGAGGAGCTTCCCACCGGCCTTCGTCGCCGCTGGCGAGAG TACACGAGCCGGTTCAACGGAAATTTGAACACCGGGGTCGATGGCGAGAT GCTATGTGCGATTCGGAAAAAGGTGTGGCAGGGAGTTTGGGCGGGGCGAT gctgcggggaggaggggatggaggaaaggatggagggcgggagggagggc ggggaggcgagTGGTCAGCTCCGGGGAGCCTTCGGGTGAATGGCAGATTT TACAGAGCACTCGGATCCacatccatcctcctctgcggATGTGGGTATGG GGACTTTCGTGATGGCCCTGACTCTGGGAATCATCGCCCGGGCCTATCTG TCTTCCCTGATCCGTCTCCCGTACACgtgcctcgtcctcatcttcggACT TCTCTATGGCTTTATTATCTACACGGAAGTCGGGATCACGGGATCAGACA TCTTCAGTCGATCCGCAGACCTGTGGATCAATATCTCGCCCGAAGCTATC TTGACGGTGATCCTGCCTATCCTGATCTTCGGTTCGTCCTTCGCCAGTGA CCTTCACCTGTTCTTGCAGCAGCTGACTCCTGTGTTGACGCTTGCCGGGC CTGCTGTGCTTGTCAATACAGCATTGCTGGGGCTGACGGCCAAATACGTG CTACCGTACGGTTGGGACTGGGCCACATCCTTCATGGTAGGGTCGATGCT GTCAGCGACAGACCCtgtggccgtggtggcgatATTGAAGGAGCTGGGAG TGGTGGAAAGCCTGTCCATCCTGATCGACGGGGAGAGCTTGCTGAACGAC GGCTTTGCCATCGTCCTGTACACGATATTCAGCCGACTCGTTCTGCACGA AGAGACCTTCTCGCCGTTGGAGACGTTGGAGGCGGCCGTTACTCTCTGTC TGGGCGGGCCGGCCATTGGGGTGGTGGTAGGGGCCGCCACAAGCTACATC CTCGGCACGCTCATCAACGACTCCGCCTCTGAAATTACCGtGACCATCCT CTGCGGCTACGGTGCCTACCTCCTTGCCGAGCTCGCCGAAGCTTCGGGTG TCCTCTCCATGGTGGTGGCTGGTCtctacctctccttccacagcGTCGGC CGTATCTCCGCCCGGGTCACCCGGTCATTGACCTCCTTCtgggccatggc ggccttCATTACCGAGACCATCATTTTCTTTGTCAGCGGCTTGAtcatgg cggagaaagccttgGTCTCAGAGACTATCTTGCCGCGCGACTGGggctac ctcttcctcttctatcTCATCCTGAACGCTACCCGCTTCGTCGGggtttt cctcttcttccccaccttaGCCCGTGGTCCCTACGGTATCAATTGGCGCC AAGCCGTTCTGCTCTCGTACGGAGGATTGCGGGGTGCAGTCTCCTTAACT TTGGCCTTGGTCGTGAGTCAGGAAGAGGGAATTCCGGAGGAAACCCGCGc actcatcctcttcttcacggCTGGCATTGTCCTTCTGACCATATTGATCA ACGGTTCTACTTGCAAGCTCGTGCTTCAGAAGCTCAAGCTGAACAATCCT ACCCGGGTGGAGCAGGAACTTTACATTCGCGCCATGAACCTGATCGAAAA CGAGCTCGAGGTCTTCGCAGGGAAGCTTAAGAACGATAAGTATCTGGGGA GTGCGGATTGGAACGTGGTTTATCGTTATCTGCCCGTGTTCTCGCCGCAA ATCTATTGGCACCGTGTAAGGGAAGGGCACATTTGtctggacgaggcaga gatTGCCTTGGTGGGCCGGTACGTGCGGGAAAATGAGCGtcaggagaaaa aagggaaggaagaaggggggggcttcagcgatgaggaggggggcgcaGGT CTTGGCAGAGCGGAGGAGAACGGGGCGGCCCTTGGACCCCAAAAGTCGTT CTTTGGGAGCTTTCTCTTTCGACCCTTCGCCTGCGTTCTCTCCGTGATGG GCTACAAACCTggcaaggacggagggggaggggaagaggagtgCAGCTAC GAGGAGCTTCCCACCGGCCTTCGTCGCCGCTGGCGAGAGTACACGAGCCG GTTCAACGGAAATTTGAACACCGGGGTCGATGGCGAGATGCTATGTGCGA TTCGGAAAAAGGTGTGGCAGGGAGTTTGGGCGGGGCGATgctgcggggag gaggggatggaggaaaggatggagggcgggagggagggcggggaggcgag TGGTCAGCTCCGGGGAGCCTTCGGGTGAATGGCAGATTTTACAGAGCACT CGGATCCacatccatcctcctctgcggATGTGGGTATGGGGACTTTCGTG ATGGCCCTGACTCTGGGAATCATCGCCCGGGCCTATCTGTCTTCCCTGAT CCGTCTCCCGTACACgtgcctcgtcctcatcttcggACTTCTCTATGGCT TTATTATCTACACGGAAGTCGGGATCACGGGATCAGACATCTTCAGTCGA TCCGCAGACCTGTGGATCAATATCTCGCCCGAAGCTATCTTGACGGTGAT CCTGCCTATCCTGATCTTCGGTTCGTCCTTCGCCAGTGACCTTCACCTGT TCTTGCAGCAGCTGACTCCTGTGTTGACGCTTGCCGGGCCTGCTGTGCTT GTCAATACAGCATTGCTGGGGCTGACGGCCAAATACGTGCTACCGTACGG TTGGGACTGGGCCACATCCTTCATGGTAGGGTCGATGCTGTCAGCGACAG ACCCtgtggccgtggtggcgatATTGAAGGAGCTGGGAGTGGTGGAAAGC CTGTCCATCCTGATCGACGGGGAGAGCTTGCTGAACGACGGCTTTGCCAT CGTCCTGTACACGATATTCAGCCGACTCGTTCTGCACGAAGAGACCTTCT CGCCGTTGGAGACGTTGGAGGCGGCCGTTACTCTCTGTCTGGGCGGGCCG GCCATTGGGGTGGTGGTAGGGGCCGCCACAAGCTACATCCTCGGCACGCT CATCAACGACTCCGCCTCTGAAATTACCGtGACCATCCTCTGCGGCTACG GTGCCTACCTCCTTGCCGAGCTCGCCGAAGCTTCGGGTGTCCTCTCCATG GTGGTGGCTGGTCtctacctctccttccacagcGTCGGCCGTATCTCCGC CCGGGTCACCCGGTCATTGACCTCCTTCtgggccatggcggccttCATTA CCGAGACCATCATTTTCTTTGTCAGCGGCTTGAtcatggcggagaaagcc ttgGTCTCAGAGACTATCTTGCCGCGCGACTGGggctacctcttcctctt ctatcTCATCCTGAACGCTACCCGCTTCGTCGGggttttcctcttcttcc ccaccttaGCCCGTGGTCCCTACGGTATCAATTGGCGCCAAGCCGTTCTG CTCTCGTACGGAGGATTGCGGGGTGCAGTCTCCTTAACTTTGGCCTTGGT CGTGAGTCAGGAAGAGGGAATTCCGGAGGAAACCCGCGcactcatcctct tcttcacggCTGGCATTGTCCTTCTGACCATATTGATCAACGGTTCTACT TGCAAGCTCGTGCTTCAGAAGCTCAAGCTGAACAATCCTACCCGGGTGGA GCAGGAACTTTACATTCGCGCCATGAACCTGATCGAAAACGAGCTCGAGG TCTTCGCAGGGAAGCTTAAGAACGATAAGTATCTGGGGAGTGCGGATTGG AACGTGGTTTATCGTTATCTGCCCGTGTTCTCGCCGCAAATCTATTGGCA CCGTGTAAGGGAAGGGCACATTTGtctggacgaggcagagatTGCCTTGG TGGGCCGGTACGTGCGGGAAAATGAGCGtcaggagaaaaaagggaaggaa gaaggggggggcttcagcgatgaggaggggggcgcaGGTCTTGGCAGAGC GGAGGAGAACGGGGCGGCCCTTGGACCCCAAAAGTCGTTCTTTGGGAGCT TTCTCTTTCGACCCTTCGCCTGCGTTCTCTCCGTGATGGGCTACAAACCT ggcaaggacggagggggaggggaagaggagtgCAGCTACGAGGAGCTTCC CACCGGCCTTCGTCGCCGCTGGCGAGAGTACACGAGCCGGTTCAACGGAA ATTTGAACACCGGGGTCGATGGCGAGATGCTATGTGCGATTCGGAAAAAG GTGTGGCAGGGAGTTTGGGCGGGGCGATgctgcggggaggaggggatgga ggaaaggatggagggcgggagggagggcggggaggcgagTGGTCAGCTCC GGGGAGCCTTCGGGTGA back to top
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