rna8731, rna8731 (mRNA) Nannochloropsis gaditana

Overview
Namerna8731
Unique Namerna8731
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3403
Alignment locationKK037250.1:24678..25969 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101414g1.8853.mrna
Orig protein idgnl|cribi|Naga_101414g1.8853
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:24678..25969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101414g1gene8463Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21971.1cds8702Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8731rna8731-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8731 ID=rna8731|Name=rna8731|organism=Nannochloropsis gaditana|type=mRNA|length=3403bp
ATTGTCACCATGCTTACACTTGCAATATAAACAGTTGTCATTACAGAAAG
CTTGTTCTCTGCATTGGAATACCTGGTACATGGCGCCCCTCAGGAGGGTA
CATCGCCTCGTTCTATGTCTTTTCATGGCACTCTGGCCTTTTATGGTCAA
ACCGCAAACGTCTACCGGTTCTGGCATGCGATCTCGAAGCCTCGGCACCA
CTTTTGGGGAAAGACATCGCAGTCTCGAAATGATGGCGGAAAGGTTTGCA
ATGTCCACCGCATTCCAACGTGCAGATCGCCCTCGACGTCAACTCGGCAC
CGCCATGAACCAGAACAATGGCTTCAAATCTGTGGGAACGCCAGGATGTA
AGGATACATTTGATAATGTCACTGATGGAAGCCATGCCCTGAAACGCGAC
ATGCTCCAGCAACGGCGTCAGAGAAGGTTTATCAGTAAGAGAAAGCTTAA
GAAGAAGCTTCAAGAGTGTGAGGCAAGCCTTCAGGAAACCCAGGCTACCT
TGAATGCACCGAGCTTCTTGTTTATTCAGATGGCGCAATCCTGCACTCTT
GAGATGACAGCGGGCAGGTATTACCTTAAGTCGTCAGATATGGATATTGA
CACATACATGTTCTCGGATAAGCCCTTCCGGTACGCATCTACGTTGCCAA
CGAGCTATTTCGTCGGATACCTGTTTGACGAGATCTTCGCAGACGAGAAA
CCAAACGCTGGCTTCACCTTCAATGTGTACAACAACCAGTCGGAAGCATC
GTTTGAAGGGCCACTCATATCTATCGTGCTGAAATCGCAGGAGATCAGTC
TTCAAGACGACAAGACGACCATGGTCGTCTACGAGCTCGCGCAGTCAGCG
GAACAGGTTAAGGCTACACCTCTCTCAGCTTTCTTCCCTGTCATCGATCC
CGATGGGAGCGCATCTTTGACCTATGAGCTATGCTCCATCTTCATCGACG
ATGGGGAGGAGTCTGTAAGACGGAGTGATTCAGTAACGACTGAGAAGAAT
TTTTTCCAGCCTCTTCTAAGCGTGGAGGAATCTGCAAAACGGGTTAGTTT
CGCTGCGTCCGTTGTCGAAAGAGGCCCCCCCGGCCCAAGTCCAGCTCCGG
GAGGTAATGTTCAACCTACCCTGAGGAGGTATGCGAAAGTTTGGCAGTAC
AAGAATGGAGAGGGCAAGAGGGAAGGAGGAATAGATGCGAAGGACTACCT
CAAGGGCGCTGCGGGCCTTGCAACGTCGGCTTCCAGTTTCATTGAAAAAT
GCAAATCGAAATCCAAAGGCTGTGATTCAAGAGACATCGTATCAGGCGTG
TCGAACATGTTTCTCTCCTTCTCCTTTGTGGTCGGGGCCGCCTTCCCCCC
TGTGGGTATAGCTTTAACGGTAGTGGCGTCCGTCGGTCTTCTCATTTCTG
CCCTGGCGTTGGACAGTAGCTTCGCAAGCGTAGTAGACAGGACCATCACC
CCGTCCATTATCCAGGGGGAGGTCAACAAAGCACTTAGAAGCTTCACTGC
ATCCTTAGACGTTGAAGTGCTCGCATCTTTCACTGCTTTCTTGCAGCTTG
ACATCGACTGCTACGTCAGGCGCATAGGCTGCATCGGAAATATTGCCAAA
CAGAAGGGTGCTGCAGGCCAGCAATCCATCGACAAGCAGATTTCTTTGTG
GTATTGGCAAGAGTATCAGCCAACATGGACCGGCACATATCAGCCGGCAC
TTTTGAGTATCGATGCAAAGTACAGTACTTGGTTTGGCTCCAACGAAAAT
GGACTGCGCACCAACATCAATAAGTGGGTCAGCGAGTGCGATAGCATGTG
TAACGTCTTGACATCTGAACTCTTAAAGGATGGAAACAACCTTCTGGACA
AATGCAAGAATAAGATAACGGATGCTAGGACCAACTGGAAGAACTTGAAT
GCTTTCGCGAATGCCTATCTCCAGATGGCTACAAAGCTGATGAGTTTCAT
GGCGCAGAGCATAGTGCTCTTCCAGTCTTCCTCGTATTGCGATCCTGAAA
AATATGACCCAAGCGTCATCAATGAAAGGTGTTATTGGAACAGTGCCATC
GACAACCTATCTTCCAAGGTGTTTGCAGTACAAAGTCGTGCGCTTTTTCT
CGCCAAAGTAATGGAAACGGCCGAAACGGAATGCAGTTCAACAGCACACG
GATGGCCCTTCTCGCAAACCTGTTCTACGAGTAGCTGCAATTACAAGTGG
GGCGTGATGATGATGAAATCTGACTGGGAGAATTATCTAGGAGAGACAAA
TGAGCAAGGTAAATTCGTCAAGCTGGACCAGTCATTTTACAGGTCAGACG
CTGTGAAGACGTGTCAAAATGACTACGACGCATGGAATAGTCCCCTAGGC
TTTGGATACGGAGGCCTTTATGCATTTAGAGTATTTGGTGGTGATGGTGT
TATATCTCGAGGCTCATGCGATAGAATCGCCGACATAGTAAGCTTTAATG
GTAATCCATTTGGAACCATTACTTTCGGAGCCATTCCGAATTTCTGTCTG
AACCAAGACTTCTCCAAATGCATGGCGCTCATGGGTGACGAGAATCTTTG
GGGCACAGACGTGTCGTTCTCCGATGATCCCTTGGTCAAGTATCCCGCAA
ATTTAGTGTGCAGCACTGCTGTCATGGGTGCGCACAATGTTCAAAGTAAA
GAAGAATGCTGGCGGAAGTGCTTCGACAGCCCTCCGAATTTGGAGCCTAT
CTTCTTCTTTACAATTATTGGGGTTAATAGATGCTTTTGCTATTCTACAT
GTCCTGTAGCGTACTCGAAGAACGCACAGTCGTATGCAGTCCTACGCCCG
CCTCCTCGATAGTGAGGGCATAGGGGGTGGTCAACAATCGAAGGGCTCAT
CGATGAAGACCGGGAAAGTCGCCTTATGAGCTCGAGAAGCAAGAGGAATC
ACAGGAAAAACGACTGGAGTGGTGCAGCGTTTTTTCATTGCCTTTTCCTT
CATCCATTTTGGGTCCCCATCCCAGATGGAGAAGGTGGAAGAACAAACAA
CTATAGAGAAGAGTAAAGAAAACTAAAACATGCTATCCCATCCTGCAGTC
GTATCCTATCGTGGACTGGATGGAGCCATTAAGATGCCGAAGTTCACTTA
TATGCTTGAAAGACATGATTCTTCTTCCCATTCCTTGTGGGGAAGGAGAC
AGGCCCATTTGTCAATCCCATTTACAGACGCCGATATCAATACTTATTCA
GTCACTCAAAGCCTTAACCAACCGAGATATCGACACTTATTCAAAGCAGT
GCAAACCCTTTACAAACCAACAGTTTAAGCAACCCCCTCCCGACCTCTCC
CTTCTTTGTGCTTCTTCTCCTCATTCCCCCTCCCGGAGAGATTGTACACT
CCCACAGCTTCAACAATTCATCGTTATTGGGACCCCATGCTCCTCCTCAC
ACC
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protein sequence of rna8731

>rna8731-protein ID=rna8731-protein|Name=rna8731|organism=Nannochloropsis gaditana|type=polypeptide|length=204bp
MSLATGTEGEGRGGKGEEEGGGEGRGKVGTEGEVEMGGGKEDGTQLAATQ
ASGESAASSATAGEGEGGATGGAEMAPAWFSGSIPASVSTTGMKEGWGNC
SAHMGRRRGERGGEEDDVPVAMPAPVTIAVVVAVVVVVVVVVTTVDFSAA
GLGAFLCPLLVLVFFFPILLIFNGKHFPDAPVKCMRKGHDAGTECQREIQ
AKPK
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mRNA from alignment at KK037250.1:24678..25969-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8731 ID=rna8731|Name=rna8731|organism=Nannochloropsis gaditana|type=mRNA|length=1292bp|location=Sequence derived from alignment at KK037250.1:24678..25969- (Nannochloropsis gaditana)
TTGGAGGGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGAT
ATAAGGGTCAGGCCGGATTTTGCGCGGTGGATCTTTTCTGACAAGGGGAC
ACTTGACAGAAACTATTTGTTAAGATGGGAGACAATGGAGAGGGAGGGAG
GGTGGGAGGAAGGGAGTGAGGGTGGGAGGAAGGGAGGGACAGAGGCACGG
GTCTGTGCGTACCTGCACAGCGACATGGGGAAACGTGGAGGAATATGGCA
AGGAACACGCAGAGAAAGTCAACGTCTTGGCGTCCGTCTCCCTACCCGCT
TGGGGCGGAGGAGGAGGAAGGAGGTCGGCGGGCGCAGGAGGAAGGGGAGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCCGAACCACCCGACTCTG
GGCCGAGAGGAGGCGAGGAGGACGCTGTGACATTCTCGGAGGTAGAAGAA
GGGGAAGGTTTTTGGGCAACTGGAACGATGTCGCTTGCCACGGGCACAGA
GGGGGAAGGAAGAGGGGGGAAAGGAGAGGAGGAGGGCGGGGGGGAGGGAA
GAGGCAAAGTGGGGACCGAGGGCGAGGTGGAGATGGGGGGCGGTAAGGAG
GACGGCACCCAGCTGGCAGCTACGCAGGCGAGTGGAGAAAGCGCTGCATC
CTCCGCAACGGCGGGCGAGGGCGAGGGAGGGGCAACGGGAGGAGCCGAGA
TGGCCCCTGCCTGGTTCTCAGGTTCGATCCCCGCTTCGGTCTCTACCACG
GGGATGAAGGAAGGGTGGGGCAACTGTTCGGCGCACATGGGTCGAAGGAG
GGGCGAGCGAGGAGGGGAGGAGGATGATGTGCCGGTTGCGATGCCAGCGC
CCGTGACCATTGCGGTCGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTT
GTCACAACTGTTGACTTCTCGGCAGCTGGCTTAGGAGCTTTTTTGTGTCC
TTTACTAGTCTTGGTCTTCTTTTTCCCCATACTTTTGATTTTTAATGGTA
AGCACTTCCCGGATGCGCCTGTCAAATGCATGAGGAAAGGTCATGATGCT
GGCACGGAATGTCAGAGAGAGATACAAGCCAAACCAAAGTAGAAATATTT
TACACGACAATGACCTTTGGGCCGTACCCACAGTCTATAGGCACGTTTGT
ACGTCTCAAGATTAAAAAAAGTAGCTAGATTCAAGCCTTATCATGCAAAG
AATAAGAAGTAGAAATCTCATCCTTCTAAGGTGATGGGGTGATGTATCCG
GTCCCTCGCAAGGCATATCTCTATAAACAACCCGCGAGACTC
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Coding sequence (CDS) from alignment at KK037250.1:24678..25969-

>rna8731 ID=rna8731|Name=rna8731|organism=Nannochloropsis gaditana|type=CDS|length=615bp|location=Sequence derived from alignment at KK037250.1:24678..25969- (Nannochloropsis gaditana)
ATGTCGCTTGCCACGGGCACAGAGGGGGAAGGAAGAGGGGGGAAAGGAGA
GGAGGAGGGCGGGGGGGAGGGAAGAGGCAAAGTGGGGACCGAGGGCGAGG
TGGAGATGGGGGGCGGTAAGGAGGACGGCACCCAGCTGGCAGCTACGCAG
GCGAGTGGAGAAAGCGCTGCATCCTCCGCAACGGCGGGCGAGGGCGAGGG
AGGGGCAACGGGAGGAGCCGAGATGGCCCCTGCCTGGTTCTCAGGTTCGA
TCCCCGCTTCGGTCTCTACCACGGGGATGAAGGAAGGGTGGGGCAACTGT
TCGGCGCACATGGGTCGAAGGAGGGGCGAGCGAGGAGGGGAGGAGGATGA
TGTGCCGGTTGCGATGCCAGCGCCCGTGACCATTGCGGTCGTTGTTGCTG
TTGTTGTTGTTGTTGTTGTTGTTGTCACAACTGTTGACTTCTCGGCAGCT
GGCTTAGGAGCTTTTTTGTGTCCTTTACTAGTCTTGGTCTTCTTTTTCCC
CATACTTTTGATTTTTAATGGTAAGCACTTCCCGGATGCGCCTGTCAAAT
GCATGAGGAAAGGTCATGATGCTGGCACGGAATGTCAGAGAGAGATACAA
GCCAAACCAAAGTAG
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Synonyms
Publications