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Properties
| Property Name | Value |
|---|
| Product | pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 |
| Orig transcript id | gnl|cribi|Naga_100017g63.287.mrna |
| Orig protein id | gnl|cribi|Naga_100017g63.287 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:610531..612501 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna871 ID=rna871|Name=rna871|organism=Nannochloropsis gaditana|type=mRNA|length=1628bp
CCGTGGCCCCAAAACACGTCTCGTTTGGCTATTCTTCTTTCCATCTCCAC
GACCATCTGTACTCTACCACCCATGAGACTCATTCCTCCCGACACCCTCT
TGCATATGCGGGCGCACACCCGGAATCGCAGTTCGTCGACCTCGTCTTCA
AAATTTTCTCGCTCGTCGCCTGACGCGCTTCCGTTTCTTCTCACATGGCG
GCCTACTTTCAAGTCTTTCGGAACAGCAAAATAGGAATAGTGTTGACACT
ATCACTGATATTTACGACGGCCATGGCGTCTCCTTCGGCATATTTCCCTG
AGAAGCTGTCCCTCCTGTTGAAGACCCTCTCAGGGAGCGACCGGCTCGTC
AACCCTCACTGCATCGACAATCCGTTCTGTGCATTCAACGACTGGGTCAA
TGCCTTTCTGTTCAGGGACGCCGTGAAGGCTGACGTGATGGCACGGCTGG
GGCCCGCGGGGGCGCATTACTTCCTTACTTACGTGCGGGACCTGGTGGCG
GGCTCCGTGCTTTATTACCTGACTGCGGGGCTCTGGCATACCTACATCTA
CCAGTGGCACGGAGACTACTTCTTCACGCAGCAAGGCTTTGAGAAACCCA
GCGCAGCGACTATCAAGGATCAGATCCAACTGGCGCAGGCGTCCATGTTC
CTGTACGCAGCCCTCCCCGTTCTGGCCGAGTGGCTGGTGGAGAGCGGGTG
GACTCAGTGCTATTACTACGTGGAGGAGATCGGGGGGTGGCCGTACTACC
TGGCTTTCACCCTTCTTTACCTGGCGATGGTGGAGGTGGGGGTGTACTGG
ATGCATCGGACGCTGCACGAGAACAAGGTGCTCTACAAGTACATCCACGG
CCTTCATCACAAGTACAACAAGCCCAGCACCCTCTCGCCCTGGGCTTCCG
TGGCATTCAACCCCATCGACGGGATTCTGCAAGCCTCTCCCTATGTGATC
TGCCTCTTCCTCGTCCCCTGCCACTACCTGACGCACGTGGCCATGGTTTT
CTTCACGGCCGTGTGGGCCACTAACATCCACGACGCTATGGACGGGAACA
CCGAGCCGGTCATGGGCAGCAAATATCACACCGTGCACCACACGCACTAC
CACTACAACTTCGGACAGTTTTTCATATTTGCCGATTGGATGTTTGGCAC
CTTGCGGATTCCAGAGCCACGGGCGGCGAAAGCGGTTCTCAGCCCAGGGG
TTGTCCCGAGCTCGGGAGTGCGAACGACAGGGAAATCAGGGAGAGGCAAG
ATGGATTGAGTCAAGACAAGAAGGGCACAGAAAGGCTGAAAGTCCCAGTA
ATTTTGAAAGGAGGGGCGTGTCCGATGTGAGACTTGCTAGGAAGTGGAGG
AGGTGAAGCATGTATGTACGATAGACGTTTCTCGTCCGCGTTGAGACAAC
ACGGGGAGTTACAAATGAATATATCTTGGAAGGAAGTGCGCCGTGCGAGG
CCGAGGCTGTAATTTTGCGAGCTTGTTTGCGTTTTCGTGCCCACCAGGAA
CATCTACCTAAGAGCGCTGCGACCGCAGTCTACATCCTCTCCGTTGAAAA
CCCGTTGTCCCCCGCCTGCCTTTGACCTCAGAGCCCCACGCGGCTCCTCC
AAAGGCGTTCTTCTATCCGCTCCTCCGC back to topprotein sequence of rna871 >rna871-protein ID=rna871-protein|Name=rna871|organism=Nannochloropsis gaditana|type=polypeptide|length=625bp
MCTQAEVGQSLEIAMTSETSCKGPGEPNYCKQYVIVGGGIAGCTAAEDLL
EIVSPEEVKVTLITATPIVKHVGKVVQVTRKLEDMEVVQRDANAFGEEHA
NLRIVQANVKSVDVHNHRIECENDSFLPFDRCLICTGAAPKIVSEHPHVV
GIRDTESVKDVATRLKNARRVLVLGNGGIALEFVHEVTSCELVWAVKDAY
VGNTFFDHTASGLVLPELESRRPVHIVDNLAVKNRGGEDRCDDPESYGDE
RVRKGIPSSNGSQAKCSERQPVGKKRPLPVALGQARHLPANRQGPLGGSL
GPHWTADLSTSLSSSTAEKKADSSVTNPKPLTILFHAELEELYETPENPP
TSSETSGEHEWPLYVRLTTGHTWGCDFLVSATGVVPSVDFLGPEFARGED
GGVVVNDRMQTTASPDVYAAGDCCSMTWPTSEVWFQMRLWSQARAMARYA
ARCMSDQVDDLGAGFAFELFAHMTRFFGFPVALLGCFNAQLLPDAEQRRL
IREVEVAFPGKATQQEAVGEGQACSPNVQLSAQTRRKDGSNALQREENGT
TDRLQDHVEILTRLTPGKEYVKVVVVGGRVKGAMCVGESTESAETFENLI
LNELDVSAFGVDLLNPDVDIDDFFD back to topmRNA from alignment at CM002456.1:610531..612501+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna871 ID=rna871|Name=rna871|organism=Nannochloropsis gaditana|type=mRNA|length=1971bp|location=Sequence derived from alignment at CM002456.1:610531..612501+ (Nannochloropsis gaditana)
TCCTTTAACGCGCGTCGCGCTTATTAACCATTACCATGTGTACACAGGCT
GAGGTTGGGCAATCACTTGAGATAGCAATGACCAGCGAGACTTCATGCAA
GGGTCCCGGTGAACCAAATTATTGCAAGCAGTATGTAATAGTAGGAGGAG
GCATCGCAGGTTGTACAGCAGCAGAGGATTTGCTTGAAATCGTCTCCCCG
GAGGAAGTAAAGGTGACCTTGATCACAGCCACCCCGATCGTCAAGCACGT
GGGCAAGGTGGTGCAAGTGACGAGAAagctggaggacatggaggtcGTAC
AACGGGATGCAAATGCGTTCGGAGAGGAGCATGCTAATTTGCGGATAGTA
CAGGCGAACGTCAAGTCTGTGGACGTGCACAACCACAGAATAGAATGCGA
GAATGAtagctttcttccctttgaCCGATGTCTTATTTGCACGGGCGCAG
CACCGAAGATTGTGTCGGAGCATCCACACGTTGTGGGCATTCGTGACACA
GAAAGCGTGAAGGACGTGGCCACGCGCTTAAAAAACGCCCGGCGCGTGCT
GGTTCTAGGTAATGGTGGCATTGCTCTCGAATTTGTACATGAAGTGACGT
CATGTGAGCTTGTATGGGCTGTGAAGGATGCGTATGTTGGGAACACCTTT
TTTGACCATACGGCATCCGGACTTGTGCTGCCAGAGCTTGAGTCCAGGCG
GCCGGTGCACATTGTGGACAATCTTGCGGTTAAAAATCGTGGCGGGGAAG
ACCGTTGTGATGATCCTGAATCATACGGCGACGAAAGAGTTAGGAAGGGT
ATACCATCGAGCAATGGCAGTCAAGCAAAGTGCAGCGAGCGTCAGCCGGT
AGGCAAGAAGCGTCCTTTGCCGGTGGCGCTGGGTCAAGCCCGACACCTTC
CCGCAAACAGGCAGGGTCCTCTCGGTGGATCCTTGGGACCGCATTGGACA
GCAGATCTATCCACTTCTTTGTCCTCCAGTACCGCAGAAAAGAAGGCGGA
TTCAAGTGTCACAAACCCCAAACCGCTCACCATTCTCTTCCACGCTGAGC
TCGAGGAGCTGTACGAGACACCCGAAAATCCCCCCACAAGTTCGGAAACC
AGTGGCGAGCATGAATGGCCGCTATACGTGCGCTTGACGACTGGACATAC
CTGGGGCTGTGACTTTCTGGTCTCCGCTACTGGCGTCGTACCTTCCGTGG
ATTTCCTGGGCCCGGAGTTTGCGCGCGGAGAGGACGGCGGCGTGGTTGTG
AATGACCGCATGCAAACGACTGCAAGCCCCGATGTTTATGCTGCCGGAGA
CTGCTGCTCAATGACATGGCCAACGTCTGAAGTCTGGTTCCAAATGCGGC
TGTGGAGTCAGGCGCGTGCGATGGCTCGTTACGCGGCTCGGTGCATGTCC
GACCAGGTGGATGATCTGGGAGCGGGTTTCGCTTTCGAGTTGTTCGCGCA
CATGACGCGGTTTTTTGGGTTTCCTGTCGCGCTGCTTGGCTGCTTCAATG
CGCAACTCCTACCGGACGCGGAGCAACGACGACTGAtcagggaggtagag
gtCGCGTTCCCGGGAAAAGCTACGCAACAGGAGGCGGTAGGCGAGGGTCA
GGCATGTTCCCCGAATGTGCAGCTCTCTGCCCAAACCAGGCGCAAAGATG
GATCAAATGCGCTCCAACGCGAAGAGAATGGAACGACCGATAGATTGCAA
GACCATGTCGAAATTCTCACGCGCCTCACCCCGGGGAAGGAATACGTAAA
GgttgtggtggtgggcgggcgggtcAAAGGGGCGATGTGTGTCGGGGAGA
GCACGGAATCGGCAGAGACTTTTGAGAATCTCATCTTAAATGAGCTGGAT
GTCAGCGCATTTGGAGTAGACTTATTGAATCCTGACGTGGACATCGACGA
TTTCTTCGACTAAAGCGACGTATCCGTTTTGACCTCAAGCATCAAAAATA
AATTTTCTCGAGGGACGAGAG back to topCoding sequence (CDS) from alignment at CM002456.1:610531..612501+ >rna871 ID=rna871|Name=rna871|organism=Nannochloropsis gaditana|type=CDS|length=1878bp|location=Sequence derived from alignment at CM002456.1:610531..612501+ (Nannochloropsis gaditana)
ATGTGTACACAGGCTGAGGTTGGGCAATCACTTGAGATAGCAATGACCAG
CGAGACTTCATGCAAGGGTCCCGGTGAACCAAATTATTGCAAGCAGTATG
TAATAGTAGGAGGAGGCATCGCAGGTTGTACAGCAGCAGAGGATTTGCTT
GAAATCGTCTCCCCGGAGGAAGTAAAGGTGACCTTGATCACAGCCACCCC
GATCGTCAAGCACGTGGGCAAGGTGGTGCAAGTGACGAGAAagctggagg
acatggaggtcGTACAACGGGATGCAAATGCGTTCGGAGAGGAGCATGCT
AATTTGCGGATAGTACAGGCGAACGTCAAGTCTGTGGACGTGCACAACCA
CAGAATAGAATGCGAGAATGAtagctttcttccctttgaCCGATGTCTTA
TTTGCACGGGCGCAGCACCGAAGATTGTGTCGGAGCATCCACACGTTGTG
GGCATTCGTGACACAGAAAGCGTGAAGGACGTGGCCACGCGCTTAAAAAA
CGCCCGGCGCGTGCTGGTTCTAGGTAATGGTGGCATTGCTCTCGAATTTG
TACATGAAGTGACGTCATGTGAGCTTGTATGGGCTGTGAAGGATGCGTAT
GTTGGGAACACCTTTTTTGACCATACGGCATCCGGACTTGTGCTGCCAGA
GCTTGAGTCCAGGCGGCCGGTGCACATTGTGGACAATCTTGCGGTTAAAA
ATCGTGGCGGGGAAGACCGTTGTGATGATCCTGAATCATACGGCGACGAA
AGAGTTAGGAAGGGTATACCATCGAGCAATGGCAGTCAAGCAAAGTGCAG
CGAGCGTCAGCCGGTAGGCAAGAAGCGTCCTTTGCCGGTGGCGCTGGGTC
AAGCCCGACACCTTCCCGCAAACAGGCAGGGTCCTCTCGGTGGATCCTTG
GGACCGCATTGGACAGCAGATCTATCCACTTCTTTGTCCTCCAGTACCGC
AGAAAAGAAGGCGGATTCAAGTGTCACAAACCCCAAACCGCTCACCATTC
TCTTCCACGCTGAGCTCGAGGAGCTGTACGAGACACCCGAAAATCCCCCC
ACAAGTTCGGAAACCAGTGGCGAGCATGAATGGCCGCTATACGTGCGCTT
GACGACTGGACATACCTGGGGCTGTGACTTTCTGGTCTCCGCTACTGGCG
TCGTACCTTCCGTGGATTTCCTGGGCCCGGAGTTTGCGCGCGGAGAGGAC
GGCGGCGTGGTTGTGAATGACCGCATGCAAACGACTGCAAGCCCCGATGT
TTATGCTGCCGGAGACTGCTGCTCAATGACATGGCCAACGTCTGAAGTCT
GGTTCCAAATGCGGCTGTGGAGTCAGGCGCGTGCGATGGCTCGTTACGCG
GCTCGGTGCATGTCCGACCAGGTGGATGATCTGGGAGCGGGTTTCGCTTT
CGAGTTGTTCGCGCACATGACGCGGTTTTTTGGGTTTCCTGTCGCGCTGC
TTGGCTGCTTCAATGCGCAACTCCTACCGGACGCGGAGCAACGACGACTG
AtcagggaggtagaggtCGCGTTCCCGGGAAAAGCTACGCAACAGGAGGC
GGTAGGCGAGGGTCAGGCATGTTCCCCGAATGTGCAGCTCTCTGCCCAAA
CCAGGCGCAAAGATGGATCAAATGCGCTCCAACGCGAAGAGAATGGAACG
ACCGATAGATTGCAAGACCATGTCGAAATTCTCACGCGCCTCACCCCGGG
GAAGGAATACGTAAAGgttgtggtggtgggcgggcgggtcAAAGGGGCGA
TGTGTGTCGGGGAGAGCACGGAATCGGCAGAGACTTTTGAGAATCTCATC
TTAAATGAGCTGGATGTCAGCGCATTTGGAGTAGACTTATTGAATCCTGA
CGTGGACATCGACGATTTCTTCGACTAA back to top
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