rna8676, rna8676 (mRNA) Nannochloropsis gaditana

Overview
Namerna8676
Unique Namerna8676
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1609
Alignment locationKK037249.1:566305..566945 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100052g40.1151.mrna
Orig protein idgnl|cribi|Naga_100052g40.1151
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:566305..566945 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100052g40gene8409Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22026.1cds8647Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8676rna8676-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8676 ID=rna8676|Name=rna8676|organism=Nannochloropsis gaditana|type=mRNA|length=1609bp
CTCCTACGGCCACCACATGGCGCTGCACATGGCCATCGGTTTCCTCTTCC
TGGGCGGGGGCCGCGCCGGCCTCTGTCGCTCCGACTCCGCCGTCGCCGCC
CTGGTGGCCGCTCTCTACCCGCGCCTTCCCGCCCATACCAGCGACAACCA
GTACTCGCTCCAGGCCATGCGTCACCTGTACGTGCTGGCGGTGGGGCACC
GAGGCGTTGAGGCCCGGGACGCGGAGACGGGGGAGAGCGTCTTCGTGCCT
CTGGAGGTCAAGTACCGGGACGGGCGGCTGGAGCGGCGGGTTGCGCCTTG
TCTGCTTCCCGAGCTGGACCTGCTCTCGGAGGTGGTCACCCGCTCGCCTC
GCTACTACCCCCTCAGCTTCAGCGTGGGGGCCGAGGGGGGCGGAGAAGAG
GGCGGGAGGGAGAACCGGCGCCGGACCAGGAGGCGGGGCGGCCCGCGCAT
GTTCGAGGGGCCCCGGCGACAGATCTGCGTCAAGCGGAAGCCGGGTCACC
TCTCCTACGCGCAGGACCCTCAGGCCCTGCGCTCTCTTCTCGTCCGGCCC
TTCGGCGCCGACCACAGGAGCCGCCACACCGACGGCGACGCCTTCCCCTC
CTCCTCCCCCTCCGAGCTGATCGCGGCCTTCACGGAGGACCCCTTTCTCT
TGGCCTTCGCTCGTCATTTCTGCACCGGAGACAGCGCGGTGGGGAGGAAG
GGCATGGGAAGCCAGGTCAGCCCTCCTCCTCCTCCTGCCCCGGGCTACCC
CCTTCCTTCACCTTCGACCCCTCCTTCTCATCCACCTTCCCCCCCGCCCC
CTCCCCGGCCCTCCCTCCTACAGCGCGAGAGTCGGCTCTGCGCGGGCGTG
CTCTACGAGTGCCTGACGCGGGAGAAGCCGGACCTACTCGTCCTCCACTT
CTCCCTCCTCCACGTCCTCCAGGTCCTCCCGACAATGGATCCCGTGGCCG
CCGCCTGCACCACCTGCAACCTGCGCCTCGTTCTTCGCTACTTTTCTCCC
GAAGCTCGGTTGCGAGGGCGGTTACGAGGAAAGCAGGGTCGTGAAGAGCG
GGAGAGGAGGGGCGATGACCCGGTGTGCTCGCGGACTGGGGGGAGGGAGG
AGGAGGGCGGCACGGAGGACTGGCTCTTACAGGCGGACTTGGTGCAGTCC
TTAAGGGTGAGGATGGATGCGCTCTTTGTCTCCCTCGGCCTGGGAGAGGA
AGTCATGGCAGAAATGGGTGTGACGGGCCACGCTGAGTCCATTGAGAGCC
TCGCGGGGGTGGATTCGTCGTCGGTGGGCTCGAAGCCTTTGTGCGGGGCG
TATGCCCTCTACTACGACCTTCCTTGCGCCGCTGCTTCGCACCCATTCGC
CGTCGGGTTTCCTCCGACAGGCCCTGTCGGGCAAGGATGGGAGCAGCAAA
GGAGGGCGGCGATGCGGGAGCTCCCCGCTTTAAGGGCCAGGGCTCCGCAC
GCGGCGCTCAGCGACTTGTTGCGGGGCCTGGGAAGCGCCGCTCGATGGCG
CGACGGGCAGGAATGGTGAAAGATGGCGAATCGGAGGTCTCAGGAACTGG
AGACTTATCATCGTAACAAATAATGACCAAAAGAACACAGAACATAGTAT
TTTCCCTCT
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protein sequence of rna8676

>rna8676-protein ID=rna8676-protein|Name=rna8676|organism=Nannochloropsis gaditana|type=polypeptide|length=200bp
FLPFPPASRACVPPFPPCHRPPLTSAPPTLEARPARDPLPARLRPARHAP
PPRPRTRARALGQRGGDARLDRGAGARLPGHGLREAGERGSPGGGGGRGG
SGLAEHPAGPRLHPGRGLSGPGAPFCLHGRQRGGSERAWRSPPLPPHAGD
LSGREGRAGGRARPGGPRPAAGEARPRDVPGDSGRGPGPGYGGLGRPGLL
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mRNA from alignment at KK037249.1:566305..566945-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8676 ID=rna8676|Name=rna8676|organism=Nannochloropsis gaditana|type=mRNA|length=641bp|location=Sequence derived from alignment at KK037249.1:566305..566945- (Nannochloropsis gaditana)
TTCCTCCCCTTCCCCCCCGCATCCCGTGCCTGCGTCCCTCCTTTCCCCCC
GTGCCACCGCCCCCCTCTCACCAGCGCCCCTCCTACCCTAGAGGCTCGCC
CTGCCCGAGACCCACTTCCTGCTCGACTACGTCCGGCCCGACATGCTCCT
CCTCCGCGTCCTCGCACGCGCGCTCGTGCTCTGGGACAGCGTGGAGGCGA
CGCCCGCCTGGATCGAGGGGCAGGTGCCCGCCTTCCTGGCCACGGCCTTC
GCGAGGCTGGGGAAAGAGGGAGCCCGGGGGGGGGAGGAGGGCGGGGAGGC
AGTGGACTGGCAGAGCATCCGGCAGGGCCACGCCTTCATCCTGGCCGGGG
CCTGTCTGGCCCTGGGGCTCCGTTTTGCCTCCACGGCCGACAAAGGGGCG
GCTCAGAGCGTGCGTGGCGTTCTCCTCCACTTCCGCCGCATGCGGGAGAC
TTATCCGGGCGGGAAGGGAGGGCGGGAGGGAGGGCGAGACCCGGTGGCCC
GCGCCCAGCGGCCGGAGAGGCCCGTCCTAGAGATGTGCCTGGGGACAGCG
GCCGTGGCCCTGGGCCTGGTTATGGCGGGCTCGGGAGACCTGGCCTCCTT
TAAGCTGCTGCGGGCGCTCAGGTGGAGGGCGGACCCAGAGG
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Coding sequence (CDS) from alignment at KK037249.1:566305..566945-

>rna8676 ID=rna8676|Name=rna8676|organism=Nannochloropsis gaditana|type=CDS|length=603bp|location=Sequence derived from alignment at KK037249.1:566305..566945- (Nannochloropsis gaditana)
TTCCTCCCCTTCCCCCCCGCATCCCGTGCCTGCGTCCCTCCTTTCCCCCC
GTGCCACCGCCCCCCTCTCACCAGCGCCCCTCCTACCCTAGAGGCTCGCC
CTGCCCGAGACCCACTTCCTGCTCGACTACGTCCGGCCCGACATGCTCCT
CCTCCGCGTCCTCGCACGCGCGCTCGTGCTCTGGGACAGCGTGGAGGCGA
CGCCCGCCTGGATCGAGGGGCAGGTGCCCGCCTTCCTGGCCACGGCCTTC
GCGAGGCTGGGGAAAGAGGGAGCCCGGGGGGGGGAGGAGGGCGGGGAGGC
AGTGGACTGGCAGAGCATCCGGCAGGGCCACGCCTTCATCCTGGCCGGGG
CCTGTCTGGCCCTGGGGCTCCGTTTTGCCTCCACGGCCGACAAAGGGGCG
GCTCAGAGCGTGCGTGGCGTTCTCCTCCACTTCCGCCGCATGCGGGAGAC
TTATCCGGGCGGGAAGGGAGGGCGGGAGGGAGGGCGAGACCCGGTGGCCC
GCGCCCAGCGGCCGGAGAGGCCCGTCCTAGAGATGTGCCTGGGGACAGCG
GCCGTGGCCCTGGGCCTGGTTATGGCGGGCTCGGGAGACCTGGCCTCCTT
TAA
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Synonyms
Publications