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Properties
| Property Name | Value |
|---|
| Product | protein disulfide isomerase |
| Orig transcript id | gnl|cribi|Naga_100052g13.1158.mrna |
| Orig protein id | gnl|cribi|Naga_100052g13.1158 |
| Gene | Pdi3 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:501998..504776 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8648 ID=rna8648|Name=rna8648|organism=Nannochloropsis gaditana|type=mRNA|length=1466bp
GTCAGCCCTCCCTTGACAGCCTCACGCCCGGGTCCTGCGCGGCTGCGACA
ATTGATGGAGGCCTTTGGTCCTCAGACGCACGGGGAGGCGCACATTGCTC
CTTTTCCTGCCTCAAACAGGGCTATTTGTGGAAACGAAGCAATAATGTGC
GGAAGGACTGGAAGCGTCGATTTTTTTATATTCGAAACGGAAAGCTGTCG
TACCAATGCGAGGATGACCCCATCGGACCCCCACGGGCAGAAATATGCGA
CCTGCTCATCTCCACCGTACGGGAGTGCTCCCGAGACACCGATACTCGCT
TTACTTTCGAGATACTTAGCCCCGGGAAACGTCCGTACATGCTGCAGGCA
GAGAGCGAAATGGAATTTCAAGAATGGATCAAGGCGCTTCGCAGCTCGAC
CGAGTCTTTGTTAGTGACGGGAGCCGGCGGGGATCGGAATACCTCCTACA
CGTCTCTATCCTCCGCCGAATCAGGCACCTCGGCCGCCGGGTCCACAACT
GAAAGCTACAGCACCTTCGCCGGACCGATGGACGCGGGCAGAGCGGCGAT
ACTCTCCCAGGCGACAGCCTCATTCGTTGCCCGAGTCCGCGAGGCCAATC
CGGTGTGCGCGGATTGCCAGCGGCCTGAGCCTGACTGGGCGAGCGTGAGT
TTCGGGACGGTCATGTGCATCGAGTGCTCCGGGATCCACCGCTCCCTCGG
TGTGCACGTGTCCAAGGTCCGGTCCCTTCTTCTCGACGCCTGGCCCCGCT
CCCTCCGCGAGGTCATGGAGGCCATGGGCAACCTGCGCGCAAACCAGGTG
TGGGAAGCCCGAGTACCTTGTGACCTGGAGAAACCCGGGGTAGAGGCTCC
GCGGGAGGTGCGAGAAGCGTGGATCCGGGACAAATACGTCAGGAAAGCCT
TCCTGGGTCCGTCCAGGCGGACCGAGAAGGAGGCGGATGGAGTGAAGGGG
CAGGAAGAGCCAAACGCAGTCCTGTACGCCGCCGCGATACAGGGAGACTT
GGCCAAAATGGGCTGGGCGTTGGCGCATGGCGCAGACGTGAATTTCGCGA
ATGGAAAAGAGCGGCGGCGGACCCCCGTGCACGCGGTATGTCAGAGGGGA
CAGAGCTTGGCGGCCCTGGCGTTTTTGGTCTTGAATGGAGGGGCCGTGGA
TGTGGTGGATGACGACGATTGGTCGCCTTTGGACCTCGCCATGAACGGGG
TTCCTGTCGCGGGAGGCGGCGCATGTGGTATAGGAGGGGCTGAGTCCTCG
GAAGCGGAGGGAGCGCGTAGACAGCTGCAACTCCAGCAGCAAAATCAATT
AAGCATCACTAGCTCGACAGCAATGCCCTTGGTGTCATATTTGCTGTCTA
AGCTCGAGCTGAAGGGGTCGTGAATGCATATAAAGGGGGAAGAACGGCGC
GAGTCGCCGCGCGAGCTTTTAATAGGAAGGCCTTACCACGGCAAAAAGTA
AATTGTACTTCTGTGA back to topprotein sequence of rna8648 >rna8648-protein ID=rna8648-protein|Name=rna8648|organism=Nannochloropsis gaditana|type=polypeptide|length=371bp
MIKKSGPAVTTVTSVEEAEAFFAKQPTAALALLDSLDSDIALAVTTFAES
SDNVPFAYTAEPAVLTNYGAKAGSLRFATPEAVFTRFLDFTGGVTAFEEL
NTWLFGHSIAPMFEFSPEKSMHLFSGPIRVHLIAFGDATEAGFADTVAAI
KEGANKFRTKALSILVGKNETRILEAFDLTEKDVPTMVIADMRAGAMKRF
FFEGDMAKAFDTEKFLTNFFAGHLKAKLKSEEPVPEDMEKAVKVIKGKSF
QKEVLESDKDVLMEFYAPWCGHCKTLEPKWDVLGDRLAGVEHVMTAKMDY
TANELDVPGVDIRGFPTILFFPADKTKEPVVYKGGREVPDFLAFLKEHAS
KPFEVEEEEEEEEEEEVKEEL back to topmRNA from alignment at KK037249.1:501998..504776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8648 ID=rna8648|Name=rna8648|organism=Nannochloropsis gaditana|type=mRNA|length=2779bp|location=Sequence derived from alignment at KK037249.1:501998..504776+ (Nannochloropsis gaditana)
GCAAGACTCGACGAAAATGCGGTTTGCTAACGCTGCCGTGCGAATCACTT
ACATGTCACGGGAGGGCCTCGCAAGCAGTGACTATCCTTTTCGCTCCGAA
CCTCACCTCTCAGAGATTAAACCCTTCGCCACCCCCTAGGAAAACGATGA
ATCGTTTGCTTTTTGGTCTTTTCGCAGCCGTCGTCGCTCTCCAGAGCGCT
ATGAGCACTGCTATCGATAAGGATGGCAGCGTTCTTGTTCTTACAGACTC
AAACTTTGAAGATGCCATCAAGGTAAAGAATCGAGGGTCGTTAAGATGCA
TCTCCACCCATGTGGGCATAGTGTAGAGAACATGGACTTGAGTGCTTGCA
ATAAAACGGCTTGAAAGACGAAGGACAACAATCATGCATACGTTTGACTG
CCATGGAGCCTTCAAACGTTCCTCAGGATCACACTCTCAGACCACAGTAG
CACACACCATCGAACCCCAGATTTGAATTACGTCGGGAGGTTTTTCATTG
TTTGGGTCATCAATCGCCGCTCACGCAAATTTGCCCTATCAAAAATGTTT
CATGGCTTGAGTTTACTGTCGCGTGGATATTTTGCAATGGTGCCATCATT
TGGTCTGCACGGACTGACATTTTCTTCGCACACACaatttctctcccctc
tcgaaGGAGCACAAACTCTTGTTGGTGGACTTCTATGCCCCCTGGTGCGG
ACACTGCAAGAGACTTGAACCTGCGTACGCTGAAGCGGCCGACATCCTGG
CTGCCTTGGAGGAGCCTATCTTCATCGCGAAGCTCGACGCCACCGAGCAC
AAAGAGGCTGCGGCAAAGCACGGGGTCCGGGGATACCCTACCCTCAAACT
TTTCAAAAACGGCGTCCCTATGGATTACCAGGTGATGTGGGAAGtggcgg
atggaggaggaaagcgtttGGATAAGTGTGCTCTTTCAGAATTGGGGATG
CCCGTTTGCTCACAGACTTAATTTCGGGTACCTTTTTTGACCTGAGACGC
CTGCCTATCCTCAGTTGCCTCTTTTTCAACCGCCTGGTTACTCACAAAGA
ATTCTTTTTTGCGATTGTTCCGTCGAAAATACAGGGCGGGCGCACGGCCG
AGGAGATTTCCGCCTACATGATCAAGAAGTCGGGTCCCGCAGTCACCACT
GTCACGTCggtagaggaggcggaggccttcttcgccaagCAACCCACGGC
CGCGCTCGCGCTCCTTGACTCCCTTGACAGTGACATCGCTCTTGCCGTGA
CCACTTTTGCGGAATCCTCTGACAACGTCCCGTTCGCGTATACCGCCGAG
CCCGCGGTCCTCACTAACTACGGCGCCAAGGCCGGCTCCCTGCGTTTCGC
CACCCCTGAAGCCGTTTTTACCCGATTCTTGGACTTTACCGGAGGGGTGA
CCGCCTTCGAGGAGCTGAACACATGGCTGTTCGGACATTCTATCGCCCCC
ATGTTCGAGTTCTCCCCCGAGAAGTCCATGCACCTGTTCTCGGGGCCCAT
CCGCGTGCACCTGATTGCTTTCGGTGACGCCACCGAGGCGGGCTTTGCGG
ACACGGTAGCCGCGATCAAGGAGGGTGCGAACAAATTCCGCACGAAGGCC
CTGTCCATTTTGGTCGGCAAGAACGAGACGCGCATCCTGGAGGCCTTCGA
CCTCACCGAAAAGGACGTGCCCACGATGGTGATCGCTGACatgcgggcgg
gggcgatgaAACGCTTTTTCTTCGAAGGCGATATGGCCAAGGCCTTTGAC
ACGGAGAAGTTTCTGACTAACTTCTTCGCCGGGCACCTGAAGGCGAAGCT
CAAGAGCGAGGAACCGGTgccggaggacatggagaaggCTGTGAAGGTGA
TCAAGGGAAAGAGCTTCCAGAAGGAGGTGCTCGAGTCAGACAAGGACGTG
CTCATGGAGTTTTACGCCCCGTGGTGCGGGCACTGGTGCgtagaggggaa
ggcggggggtttgtaaaggtgggagggaaggcagacATGTGACGGCACGA
gccactccctcctgcccggtTGCCAGCCCCCCTGAGCGAGGATCATActc
tctctcaccttctcggttcctcccctgcccaaTAGCAAAACCCTGGAGCC
CAAGTGGGACGTGCTGGGCGACCGGCTCGCTGGTGTGGAGCACGTGATGA
CCGCCAAGATGGACTACACGGCCAACGAGCTCGACGTGCCCGGGGTCGAC
ATTCGCGGATTCCccaccatcctcttcttccccgccgaCAAGACCAAGGA
GCCCGTCGTCTACAaggggggccgggaggtgcCCGACTTCCTGGCATTCT
TGAAGGAGCATGCTAGCAAGCCCtttgaggtggaggaggaggaggaggag
gaggaggaggaggaggtgaaagaggagctgTAAACCACAGAAAGCAGAGT
CAAAAAATCCGATGGACAGGCACGAAACCCTGGCACATCATTAATATCCC
TGAATGATGCACAAGAGAAAGCGTTTGCGGAAGCAACAAGCGAGTGCCAT
GTGGGCGGGTATTAAAAGTCAGTGGCGAAAGTCTTTTGATAGCTCAAGTA
CTGGAGAGTTGATGAGACGGGAAAATGCGGATAAAAATATGTGGGAGAAC
TCCTAAGGTCAGTTGATATTAAaatcttttcccctttcgtCTGCCATGCT
AGGCAACAAAGAAATCGTACCCTGCCGAATTACAGTGGTCATGATTGGTA
TAAGAGAACAATAGAGAGAAGAGCAATGATAGTGAAAGAATTGAATCTGA
AGGAACTCAGGGCAAGAAGATAAGCCTTT back to topCoding sequence (CDS) from alignment at KK037249.1:501998..504776+ >rna8648 ID=rna8648|Name=rna8648|organism=Nannochloropsis gaditana|type=CDS|length=2232bp|location=Sequence derived from alignment at KK037249.1:501998..504776+ (Nannochloropsis gaditana)
ATGATCAAGAAGTCGGGTCCCGCAGTCACCACTGTCACGTCggtagagga
ggcggaggccttcttcgccaagCAACCCACGGCCGCGCTCGCGCTCCTTG
ACTCCCTTGACAGTGACATCGCTCTTGCCGTGACCACTTTTGCGGAATCC
TCTGACAACGTCCCGTTCGCGTATACCGCCGAGCCCGCGGTCCTCACTAA
CTACGGCGCCAAGGCCGGCTCCCTGCGTTTCGCCACCCCTGAAGCCGTTT
TTACCCGATTCTTGGACTTTACCGGAGGGGTGACCGCCTTCGAGGAGCTG
AACACATGGCTGTTCGGACATTCTATCGCCCCCATGTTCGAGTTCTCCCC
CGAGAAGTCCATGCACCTGTTCTCGGGGCCCATCCGCGTGCACCTGATTG
CTTTCGGTGACGCCACCGAGGCGGGCTTTGCGGACACGGTAGCCGCGATC
AAGGAGGGTGCGAACAAATTCCGCACGAAGGCCCTGTCCATTTTGGTCGG
CAAGAACGAGACGCGCATCCTGGAGGCCTTCGACCTCACCGAAAAGGACG
TGCCCACGATGGTGATCGCTGACatgcgggcgggggcgatgaAACGCTTT
TTCTTCGAAGGCGATATGGCCAAGGCCTTTGACACGGAGAAGTTTCTGAC
TAACTTCTTCGCCGGGCACCTGAAGGCGAAGCTCAAGAGCGAGGAACCGG
TgccggaggacatggagaaggCTGTGAAGGTGATCAAGGGAAAGAGCTTC
CAGAAGGAGGTGCTCGAGTCAGACAAGGACGTGCTCATGGAGTTTTACGC
CCCGTGGTGCGGGCACTGCAAAACCCTGGAGCCCAAGTGGGACGTGCTGG
GCGACCGGCTCGCTGGTGTGGAGCACGTGATGACCGCCAAGATGGACTAC
ACGGCCAACGAGCTCGACGTGCCCGGGGTCGACATTCGCGGATTCCccac
catcctcttcttccccgccgaCAAGACCAAGGAGCCCGTCGTCTACAagg
ggggccgggaggtgcCCGACTTCCTGGCATTCTTGAAGGAGCATGCTAGC
AAGCCCtttgaggtggaggaggaggaggaggaggaggaggaggaggaggt
gaaagaggagctgTAAATGATCAAGAAGTCGGGTCCCGCAGTCACCACTG
TCACGTCggtagaggaggcggaggccttcttcgccaagCAACCCACGGCC
GCGCTCGCGCTCCTTGACTCCCTTGACAGTGACATCGCTCTTGCCGTGAC
CACTTTTGCGGAATCCTCTGACAACGTCCCGTTCGCGTATACCGCCGAGC
CCGCGGTCCTCACTAACTACGGCGCCAAGGCCGGCTCCCTGCGTTTCGCC
ACCCCTGAAGCCGTTTTTACCCGATTCTTGGACTTTACCGGAGGGGTGAC
CGCCTTCGAGGAGCTGAACACATGGCTGTTCGGACATTCTATCGCCCCCA
TGTTCGAGTTCTCCCCCGAGAAGTCCATGCACCTGTTCTCGGGGCCCATC
CGCGTGCACCTGATTGCTTTCGGTGACGCCACCGAGGCGGGCTTTGCGGA
CACGGTAGCCGCGATCAAGGAGGGTGCGAACAAATTCCGCACGAAGGCCC
TGTCCATTTTGGTCGGCAAGAACGAGACGCGCATCCTGGAGGCCTTCGAC
CTCACCGAAAAGGACGTGCCCACGATGGTGATCGCTGACatgcgggcggg
ggcgatgaAACGCTTTTTCTTCGAAGGCGATATGGCCAAGGCCTTTGACA
CGGAGAAGTTTCTGACTAACTTCTTCGCCGGGCACCTGAAGGCGAAGCTC
AAGAGCGAGGAACCGGTgccggaggacatggagaaggCTGTGAAGGTGAT
CAAGGGAAAGAGCTTCCAGAAGGAGGTGCTCGAGTCAGACAAGGACGTGC
TCATGGAGTTTTACGCCCCGTGGTGCGGGCACTGCAAAACCCTGGAGCCC
AAGTGGGACGTGCTGGGCGACCGGCTCGCTGGTGTGGAGCACGTGATGAC
CGCCAAGATGGACTACACGGCCAACGAGCTCGACGTGCCCGGGGTCGACA
TTCGCGGATTCCccaccatcctcttcttccccgccgaCAAGACCAAGGAG
CCCGTCGTCTACAaggggggccgggaggtgcCCGACTTCCTGGCATTCTT
GAAGGAGCATGCTAGCAAGCCCtttgaggtggaggaggaggaggaggagg
aggaggaggaggaggtgaaagaggagctgTAA back to top
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