|
|
Properties
| Property Name | Value |
|---|
| Product | soluble pyridine nucleotide transhydrogenase |
| Orig transcript id | gnl|cribi|Naga_100244g1.1335.mrna |
| Orig protein id | gnl|cribi|Naga_100244g1.1335 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:460851..462460 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8629 ID=rna8629|Name=rna8629|organism=Nannochloropsis gaditana|type=mRNA|length=681bp
ATGACCAGAAGGCATAGATCGCCACCCCGTGGCTTTTTCCTGGTCGCGTT
ACTCGCCGCACTGGCCCCTCTTCACTGCCACCTCCTGGTGAAAGCCTTTC
AACGTCCTGCAGGAAATCCCTTCTTGCCTGTTTGGCCGGAAAAGATTACT
AGCCAATCTGCCTCCCAAGCGCTAAACCCTCCACTATCGCCTATCCTGTC
TTCGATTCGTCGCGTGGTGCGATTGCAAGCCACGCCCGATCAAGTCAGAT
TGCCAGACCTGTCCCAGACGGCCTTCCCCGAGAAGGAAGACGACACGCCC
TACGATTTGATCGTACTGGGTTCGGGTCCTGCGGGGGAAACAGCGGGATG
CAAAGCCGCGCAGCTCGGTCAGAAAGTCGCCATCATTGAAATCAAGAAGG
CATTCGGCGGGCCCACGGGCTTAACCTCGAAAGCAGTCCGAGAGGCGGCC
AAGCGGATCCTGAAAACCGTCGATCAGGTGGGTGGTGACCGCATGAAACA
AATTCGACGTCTCTGGAAGAAGCGTTTCCCGGCCCTAAAGTCGGAGGCGG
AGGTGTACCAGGCTGCCGAAACGCGAGACCGGTTGGTCAAGAATGATTGC
CATTTGTACATCGGCTCCGCCCTCCTCGTGAAGGACAGCTGGGATCCGGA
CAACGAGGACCACGTCACAGTCAGGGTGTAA back to topprotein sequence of rna8629 >rna8629-protein ID=rna8629-protein|Name=rna8629|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
AVIGGGVISVEYATVFAAMGLPTSLLCREEAFLPFLPTELQTAIKADMAR
NGIEVIHNPVSRFEVGEDKMVRFEFEGLRGGEGGPVEEDDGGRRQLEVGL
VLYSGGRDANSEKIGCEEVGVEVGKYGRIVVDKDFRTGNPRVFAIGDVIG
PPGLASFAQQSARVVTDLLFREEREGRGRGGGEKGEGRRGGLMGQAEVTL
EDWAGGDDFFAAPDANAEEEEEKERERSLALLKRMEAPLTLWTVPEIASS
GMSTEEALARGERLAETEEQGGGIVFGYAFFKDLARGRLSGDLNGFLKII
ARAEGGSGQKMRHTIIGVHIVGDGANELIQLGSMLVHSHSTLEELSNMPF
AAVTLSCLYQVASDDALCRSPFSSMRKPADVAVGVGERTGAGRVRTGAGA
D back to topmRNA from alignment at KK037249.1:460851..462460+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8629 ID=rna8629|Name=rna8629|organism=Nannochloropsis gaditana|type=mRNA|length=1610bp|location=Sequence derived from alignment at KK037249.1:460851..462460+ (Nannochloropsis gaditana)
GCCGTCATCGGCGGGGGGGTCATCTCCGTCGAGTACGCCACTGTCTTCGC
CGCCATgggccttcccacctcccttctctgccgcgaggaggccttcctcc
ccttcctacccACGGAGCTCCAGACCGCCATCAAGGCGGACATGGCCCGC
AACGGGATCGAGGTCATTCATAACCCGGTCAGTCGGTtcgaggtgggcga
ggacaagATGGTGCGCTTTGAGTTCGAGGGGctccggggcggggagggcg
gcccagtggaggaagacgacggggGCCGGCGGCAGTTGGAGGTGGGCCTG
GTCCTCTAcagcggcgggagggatgcgaACAGCGAGAAGATCGGgtgcga
ggaggtgggggtggaggtggggaagtaCGGGCGGATCGTGGTGGACAAGG
ACTTCAGGACGGGGAATCCGCGCGTATTCGCCATCGGGGACGTGATCGGC
CCCCCTGGACTGGCCTCCTTCGCGCAACAGTCGGCGCGAGTGGTGACCGA
CTTGCTTTTccgggaggagcgggaagggagggggaggggtgggggggaga
agggggagggcaggcgggggggcttGATGGGCCAAGCCGAGGTGACGCTG
GAggactgggcggggggggacgatTTCTTCGCCGCCCCGGATGCGAatgc
cgaagaggaggaagagaaagagagggagaggagccttGCGCTCTTGAAGC
GGATGGAGGCCCCCTTGACCCTCTGGACGGTCCCGGAGATAGCCAGCAGC
GGGATGTCGAccgaggaggccctggcccgaggagagaggctggcggagac
ggaggagcagggcgggggtaTCGTCTTCGGCTACGCATTCTTCAAGGACC
TGGCGCGAGGCCGTCTCTCAGGCGATTTGAACGGATTCTTGAAGATTATC
gccagggcggagggaggcagcgggcaAAAGATGCGGCACACGATCATCGG
CGTGCACATCGTGGGGGACGGAGCCAACGAGCTGATTCAGCTGGGGTCCA
TGCTCGTTCACTCCCACAGCACCTTAGAGGAGCTCAGCAACATGCCCTTC
GCGGCCGTCACCTTGAGCTGCCTGTACCAGGTCGCCTCCGATGACGCCCT
GTGTCGAAGCCCCTTCAGCAGCATGCGGAAGCCGGCGGATGTCGCGGTCg
gagtgggagagaggacgggcgcaGGGAGAGTGCGAAcaggggcgggagcg
gaCTGAGAAGGCCCCGCCGGGAAAGGCTCGCGAGAAAGTGTGACatgcgg
gggggagggttgcATGGCCCGACGCCCGTAACGCGAGAGAGCAAGTGACA
ATAGTTGAGCTACGCATTCAGTAATGGaggaagccctccttcctgtaaGG
GAGCGGGGTTGAAAGGGCAGTGATGGCACCTGAGGGTGGCTTGGGAAGCT
TTAGACATTCTTTTAGGAACGACAGGGAAAAAGCATGATTGTGAATATGT
TAAGATGCCGGATGATCTAATGCGatggatggagaaggagtcTGTAGGGC
CCCTTAGATCGGTGATTTACCATGTTCCTCTTAGACGAACAGAATGAGAC
CAAATGGAACAAAtgattttccttttttgcATCAAGAGAGTGTGGTGATT
cttatttctt back to topCoding sequence (CDS) from alignment at KK037249.1:460851..462460+ >rna8629 ID=rna8629|Name=rna8629|organism=Nannochloropsis gaditana|type=CDS|length=1206bp|location=Sequence derived from alignment at KK037249.1:460851..462460+ (Nannochloropsis gaditana)
GCCGTCATCGGCGGGGGGGTCATCTCCGTCGAGTACGCCACTGTCTTCGC
CGCCATgggccttcccacctcccttctctgccgcgaggaggccttcctcc
ccttcctacccACGGAGCTCCAGACCGCCATCAAGGCGGACATGGCCCGC
AACGGGATCGAGGTCATTCATAACCCGGTCAGTCGGTtcgaggtgggcga
ggacaagATGGTGCGCTTTGAGTTCGAGGGGctccggggcggggagggcg
gcccagtggaggaagacgacggggGCCGGCGGCAGTTGGAGGTGGGCCTG
GTCCTCTAcagcggcgggagggatgcgaACAGCGAGAAGATCGGgtgcga
ggaggtgggggtggaggtggggaagtaCGGGCGGATCGTGGTGGACAAGG
ACTTCAGGACGGGGAATCCGCGCGTATTCGCCATCGGGGACGTGATCGGC
CCCCCTGGACTGGCCTCCTTCGCGCAACAGTCGGCGCGAGTGGTGACCGA
CTTGCTTTTccgggaggagcgggaagggagggggaggggtgggggggaga
agggggagggcaggcgggggggcttGATGGGCCAAGCCGAGGTGACGCTG
GAggactgggcggggggggacgatTTCTTCGCCGCCCCGGATGCGAatgc
cgaagaggaggaagagaaagagagggagaggagccttGCGCTCTTGAAGC
GGATGGAGGCCCCCTTGACCCTCTGGACGGTCCCGGAGATAGCCAGCAGC
GGGATGTCGAccgaggaggccctggcccgaggagagaggctggcggagac
ggaggagcagggcgggggtaTCGTCTTCGGCTACGCATTCTTCAAGGACC
TGGCGCGAGGCCGTCTCTCAGGCGATTTGAACGGATTCTTGAAGATTATC
gccagggcggagggaggcagcgggcaAAAGATGCGGCACACGATCATCGG
CGTGCACATCGTGGGGGACGGAGCCAACGAGCTGATTCAGCTGGGGTCCA
TGCTCGTTCACTCCCACAGCACCTTAGAGGAGCTCAGCAACATGCCCTTC
GCGGCCGTCACCTTGAGCTGCCTGTACCAGGTCGCCTCCGATGACGCCCT
GTGTCGAAGCCCCTTCAGCAGCATGCGGAAGCCGGCGGATGTCGCGGTCg
gagtgggagagaggacgggcgcaGGGAGAGTGCGAAcaggggcgggagcg
gaCTGA back to top
|