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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100039g18.4410.mrna |
| Orig protein id | gnl|cribi|Naga_100039g18.4410 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:428497..430494 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8614 ID=rna8614|Name=rna8614|organism=Nannochloropsis gaditana|type=mRNA|length=1876bp
ACCCAAAAGGGATAGACTAATTACGATAAAAATCGTAGTACGTACTGAAT
TCGAGCTCCCCGCGCAACACTCTATTCACTATGCATTCAGCGCCTTTTAA
GACATTTTTTAATGCATCTTTGTGGGGAATGATTTTAACAATGCTATTAG
ACACTGCTCATGCAGCTTTAGGTGCCCCCCCCTCGCTCCCTACCACGACG
GATGACGTTGCCCAACATGAGATATCATTGGTTAACCATGATGGATCAAT
TTTAGATCAGCTTAACAGCACACTTGGTGGTATCCCATCCAAATGGCACA
ATTGGCATGATACAATTGTTTGTAAACCTGGTTTTCTGGCATTCCCTTCG
AGCATCGAGGAGGTGATACAATTGGTAAAAAGTCATGCATGTGTGCGGGT
GGTAGGCTTGGGCCACAGCTTCAATGACTTGACGTGCTCAGACGATTTAA
TGATGGCGACTCTTCAATTAGACCGCATTCTGGGCTTAGACAAATCTAAA
ATGACTGTTACCACGCAGGCCGGTGTGAAAACCCGGAACTTGATTGACTG
GCTTGCCCGTCGAGGATACGCTCTGCCCACAATTCCCTACTACATCGATC
AATCGATTGGGGGGGCCGTTGCGACAGCAACTCATGGTAGCTCAATATTC
TGGGGAAGTTTGTCCAGTCTTGTAACAGAAATAAAAATCGTCTTAGCCGA
TGGCAGCGTGCGCACATTGACGGAAGCGGATGGCGACCTTTTTGCTGCGG
CGCGATGCAATGTAGGCGTCTTGGGCGTGGTGGTGGAACTCACCTTTATT
ATTGTACCAAACAAAATTGTAAGACGCGGGCTAGGGTATGCTTCGGACGC
ACACTTACTTACTGAACTCAAAAAAGCCGAACATGATTCCTTGGCTTTTG
AGCGTGTACATTATTGGTATTCCCCCCCTTTGAAGCTGGCTGCTGTCACG
ACGGTGGACAACCTTTCCCCCGTTGAGCAGCATGAGGCGAAAGCCATGTC
TAGCTTAGGGCGTGAAGCATCAGATTGGTACTACCGTCTTTTCGCCGATA
GCCCGCTGGAGAAACCCTTGCAACGGGTGGTACTGGCGAATTATTTAAAG
ACCCCGTCCGCCAAGGAGGCGGCCACGAATATAATGCTTGGGCACGCCAT
GAATATACTGCCTGGTACGTACAAATTATCCGATGCCCTACCTGTGCAGC
AAGTCTTGGAGACAGACATTCTCCTCTCAGCCTTTGGCCGATATGATCAA
TACGAATACGCAGTGGCTCTGGACAAGGCCCATGACTGCGTCAAGTCTCT
ATTTGAGCTCTTCGATCGGAATGTAACCAATCGGGACGATTTCCGAGTTC
CTTTTTGTCTCCGTTTCGTGGGACCCAACCATGAAGGTTTGCTCGGTATG
TCTCGTGGAGGGTCACGTTTTTATTTGAATATGGACAACTACGACGTGTA
CAATCGGCATGGCTTTTCGCAATCCATGCAAGTTATCAAGGATCTTATGG
CGTCCGACACTTGCCAAGCCCGCGTGCACTACGGGAAAGCTTCCATCTAT
TCTCCTGTGAGCGGTGCTTGGACTAAGCGTGATGCGCAGTATGTGAAGGA
CACGGTGGGCGTGGACATCTTTGAGCGCTTCCTTTCTGCAGCAAAGACCC
TGGACCCGTCCGGAAAGTTTGCTGACGGGGTGTTGGTCCCAAAATAACGT
GAAATTCTTCAATTTAACAGGGGTTTGTAAGAGGCAGGGGATACATGTGA
CAAAGGTTTGATGTACGAGGGACAAATGTGGCAAAAAAAGATACCTTACG
GGAGACTGTCTCCAAGCGAACTTCAAGTTTTTAATCACACACATTTCTTT
AAAAAGTAATGCTACTGATTTGTCCT back to topprotein sequence of rna8614 >rna8614-protein ID=rna8614-protein|Name=rna8614|organism=Nannochloropsis gaditana|type=polypeptide|length=392bp
MRGEREGGWQENEGCVRYPARNCRVIRRKKHARRRWNGPRQSQKKNETRN
GLQNGTRIVARRVKYEEVGASRLRSCRSQSSFAFLLSLADPGCSQTTTRV
FLVPIWPKVVRIPRRNSASSQIHRSPKIVCSHPLSGHSDQAEGGTARTRP
RHYPALAGASFELETLSTFLRRSFAEAVFTPTRGHAASVLSQASLTPRRR
ARRPPPRLACQFWRHTVVAVLFLDSTRGEDKGRGQVAEKVALGAIFADCK
DPGDTKDVLKYNDRNSSPLLLLGFVSTSIGTASAEPTRQVPPAIGRVCGN
LLLLRLSDLDGSLKFFWAEDADNDEGDDVPEEEDEGDTDVFTCCVLESFN
LGRPTRHLAAVTSSHSCRSLLLRPLIQRAFRLVIVVPGSVLR back to topmRNA from alignment at KK037249.1:428497..430494- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8614 ID=rna8614|Name=rna8614|organism=Nannochloropsis gaditana|type=mRNA|length=1998bp|location=Sequence derived from alignment at KK037249.1:428497..430494- (Nannochloropsis gaditana)
ATGCGGGGAGAACGCGAGGGAGGGTGGCAGGTAGGGATTGCGTGGTGTCC
ATGTCCGAGGGTGGAGGAGTGGATGGGGCGGAAAGGGGCTTCAACGCGGT
CGCTCGTAGAGGGATGTGGCTAAAGTAGGAAAATGAAGGGTGTGTGCGGT
ACCCAGCACGGAATTGTCGAGTGATCAGGCGAAAGAAGCATGCTAGGAGA
AGATGGAATGGGCCAAGGCAGTCGCAAAAGAAAAATGAAACAAGAAACGG
GCTCCAGAACGGGACGAGTTGGACATGACACTACAGACTGTGATCGAGCG
TTTTTTTTTCCAATATCGCTGAACTCGTGCTTTGTTGACATGGCTGAGAG
TAGAGCATGGCTCAACGCTTGGGCATTCTTTCCCCCATTCATCCGCCATG
AGATGCGACGGGGACGCCTTGAGAAGGCGAGTGAAAGCTTGTCTCGGATC
TCACATGGAAGCAAAATAAATTACACATAGCACAACATGAACACAAAACC
TCCATGCATACGGCTTGACCTGCTGTGAGAGAGACTGACTAAGTTGTCCG
GCTTTCCGTTCATCAGGATACTAGCGAATATCCTTGAGACTTGCAAGTTG
GCGGGTTACAAAGACCTTTGATGGATCGCTTTTAATGCTTCTTCGGGAGG
AATGCTTTTCATTTATACTTCGATCTTCCATCTTCTATCAATATATGTAT
GTACGCAGTGTGTAAGCATTCCCATTAATAACTATGCATCGAATTGCCGG
TAGGCTCCTTTTACAATGGTCTTTCTTACATCCTCATCTTTTTTCATATG
CTACACGTCAGCCCCTATCTTTGACCCTCTTTTCAGAGTGAAGCCAAGGA
ATTGTTGCACGAAGGGTAAAATACGAAGAGGTCGGCGCTTCAAGACTGCG
TTCATGTAGGTCTCAATCGTCGTTTGCCTTTCTGCTGTCACTTGCGGATC
CAGGTTGCTCCCAAACGACAACCAGGGTCTTTTTGGTGCCAATTTGGCCA
AAAGTGGTTCGTATCCCTCGTAGAAACTCAGCGTCGAGTCAAATTCACAG
ATCTCCGAAAATCGTTTGTTCACATCCCTTGAGCGGCCATTCTGATCAAG
CCGAAGGCGGTACAGCACGTACTCGGCCCCGTCACTATCCTGCACTAGCG
TGTGACCCATTACCTTGACTCGCAGGGGCCCGCTCTTACTGGACGAGGAG
GAGGAGGGGACGGATGGCCTGGCAAGAGGAGCCTCGTTTGAGCTGGAGAC
GTTGTCTACATTCCTAAGGAGATCCTTCGCCGAAGCTGTATTCACCCCCA
CCAGAGGCCATGCGGCCTCTGTTCTATCGCAAGCATCGCTGACTCCGCGT
CGCCGAGCCCGTCGGCCGCCTCCCCGCCTTGCCTGCCAATTTTGGCGACA
CACAGTAGTCGCTGTGCTGTTTCTTGACTCCACACGCGGTGAGGACAAAG
GCAGGGGGCAGGTCGCGGAAAAGGTCGCGCTGGGTGCGATATTTGCAGAC
TGCAAAGATCCAGGAGACACAAAAGATGTTTTGAAATATAATGATAGGAA
TTCTTCCCCATTGCTGCTGCTCGGTTTCGTATCGACTTCGATAGGCACGG
CATCAGCAGAACCGACTCGGCAAGTGCCCCCAGCGATAGGACGAGTTTGC
GGGAACCTCTTGCTGCTCCGTTTGAGTGATTTAGACGGCTCACTGAAGTT
TTTCTGGTTCGTCTGAGGTGCTGCTTCGGACCCACTACTTTCGGGCGTAG
AGGACTCGGCTGGGGACAGGGCAGAGGACGCAGACAACGACGAGGGCGAT
GACGTGCCAGAGGAAGAGGATGAGGGTGACACCGACGTATTTACATGTTG
CGTATTGGAATCCTTCAATCTTGGACGGCCTACACGGCATTTAGCTGCTG
TCACAAGCTCCCATTCTTGTCGTTCGCTTTTACTGAGGCCTTTGATCCAA
AGAGCTTTCCGTCTCGTGATTGTCGTCCCTGGGAGTGTTCTGAGGTAA back to topCoding sequence (CDS) from alignment at KK037249.1:428497..430494- >rna8614 ID=rna8614|Name=rna8614|organism=Nannochloropsis gaditana|type=CDS|length=5895bp|location=Sequence derived from alignment at KK037249.1:428497..430494- (Nannochloropsis gaditana)
GGCAGAGGACGCAGACAACGACGAGGGCGATGACGTGCCAGAGGAAGAGG
ATGAGGGTGACACCGACGTATTTACATGTTGCGTATTGGAATCCTTCAAT
CTTGGACGGCCTACACGGCATTTAGCTGCTGTCACAAGCTCCCATTCTTG
TCGTTCGCTTTTACTGAGGCCTTTGATCCAAAGAGCTTTCCGTCTCGTGA
TTGTCGTCCCTGGGAGTGTTCTGAGGTAAAGGAGCCTCGTTTGAGCTGGA
GACGTTGTCTACATTCCTAAGGAGATCCTTCGCCGAAGCTGTATTCACCC
CCACCAGAGGCCATGCGGCCTCTGTTCTATCGCAAGCATCGCTGACTCCG
CGTCGCCGAGCCCGTCGGCCGCCTCCCCGCCTTGCCTGCCAATTTTGGCG
ACACACAGTAGTCGCTGTGCTGTTTCTTGACTCCACACGCGGTGAGGACA
AAGGCAGGGGGCAGGTCGCGGAAAAGGTCGCGCTGGGTGCGATATTTGCA
GACTGCAAAGATCCAGGAGACACAAAAGATGTTTTGAAATATAATGATAG
GAATTCTTCCCCATTGCTGCTGCTCGGTTTCGTATCGACTTCGATAGGCA
CGGCATCAGCAGAACCGACTCGGCAAGTGCCCCCAGCGATAGGACGAGTT
TGCGGGAACCTCTTGCTGCTCCGTTTGAGTGATTTAGACGGCTCACTGAA
GTTTTTCTGGAATTGTTGCACGAAGGGTAAAATACGAAGAGGTCGGCGCT
TCAAGACTGCGTTCATGTAGGTCTCAATCGTCGTTTGCCTTTCTGCTGTC
ACTTGCGGATCCAGGTTGCTCCCAAACGACAACCAGGGTCTTTTTGGTGC
CAATTTGGCCAAAAGTGGTTCGTATCCCTCGTAGAAACTCAGCGTCGAGT
CAAATTCACAGATCTCCGAAAATCGTTTGTTCACATCCCTTGAGCGGCCA
TTCTGATCAAGCCGAAGGCGGTACAGCACGTACTCGGCCCCGTCACTATC
CTGCACTAGCGAAAATGAAGGGTGTGTGCGGTACCCAGCACGGAATTGTC
GAGTGATCAGGCGAAAGAAGCATGCTAGGAGAAGATGGAATGGGCCAAGG
CAGTCGCAAAAGAAAAATGAAACAAGAAACGGGCTCCAGAACGGGACGAA
TGCGGGGAGAACGCGAGGGAGGGTGGCAGGGCAGAGGACGCAGACAACGA
CGAGGGCGATGACGTGCCAGAGGAAGAGGATGAGGGTGACACCGACGTAT
TTACATGTTGCGTATTGGAATCCTTCAATCTTGGACGGCCTACACGGCAT
TTAGCTGCTGTCACAAGCTCCCATTCTTGTCGTTCGCTTTTACTGAGGCC
TTTGATCCAAAGAGCTTTCCGTCTCGTGATTGTCGTCCCTGGGAGTGTTC
TGAGGTAAAGGAGCCTCGTTTGAGCTGGAGACGTTGTCTACATTCCTAAG
GAGATCCTTCGCCGAAGCTGTATTCACCCCCACCAGAGGCCATGCGGCCT
CTGTTCTATCGCAAGCATCGCTGACTCCGCGTCGCCGAGCCCGTCGGCCG
CCTCCCCGCCTTGCCTGCCAATTTTGGCGACACACAGTAGTCGCTGTGCT
GTTTCTTGACTCCACACGCGGTGAGGACAAAGGCAGGGGGCAGGTCGCGG
AAAAGGTCGCGCTGGGTGCGATATTTGCAGACTGCAAAGATCCAGGAGAC
ACAAAAGATGTTTTGAAATATAATGATAGGAATTCTTCCCCATTGCTGCT
GCTCGGTTTCGTATCGACTTCGATAGGCACGGCATCAGCAGAACCGACTC
GGCAAGTGCCCCCAGCGATAGGACGAGTTTGCGGGAACCTCTTGCTGCTC
CGTTTGAGTGATTTAGACGGCTCACTGAAGTTTTTCTGGAATTGTTGCAC
GAAGGGTAAAATACGAAGAGGTCGGCGCTTCAAGACTGCGTTCATGTAGG
TCTCAATCGTCGTTTGCCTTTCTGCTGTCACTTGCGGATCCAGGTTGCTC
CCAAACGACAACCAGGGTCTTTTTGGTGCCAATTTGGCCAAAAGTGGTTC
GTATCCCTCGTAGAAACTCAGCGTCGAGTCAAATTCACAGATCTCCGAAA
ATCGTTTGTTCACATCCCTTGAGCGGCCATTCTGATCAAGCCGAAGGCGG
TACAGCACGTACTCGGCCCCGTCACTATCCTGCACTAGCGAAAATGAAGG
GTGTGTGCGGTACCCAGCACGGAATTGTCGAGTGATCAGGCGAAAGAAGC
ATGCTAGGAGAAGATGGAATGGGCCAAGGCAGTCGCAAAAGAAAAATGAA
ACAAGAAACGGGCTCCAGAACGGGACGAATGCGGGGAGAACGCGAGGGAG
GGTGGCAGGGCAGAGGACGCAGACAACGACGAGGGCGATGACGTGCCAGA
GGAAGAGGATGAGGGTGACACCGACGTATTTACATGTTGCGTATTGGAAT
CCTTCAATCTTGGACGGCCTACACGGCATTTAGCTGCTGTCACAAGCTCC
CATTCTTGTCGTTCGCTTTTACTGAGGCCTTTGATCCAAAGAGCTTTCCG
TCTCGTGATTGTCGTCCCTGGGAGTGTTCTGAGGTAAAGGAGCCTCGTTT
GAGCTGGAGACGTTGTCTACATTCCTAAGGAGATCCTTCGCCGAAGCTGT
ATTCACCCCCACCAGAGGCCATGCGGCCTCTGTTCTATCGCAAGCATCGC
TGACTCCGCGTCGCCGAGCCCGTCGGCCGCCTCCCCGCCTTGCCTGCCAA
TTTTGGCGACACACAGTAGTCGCTGTGCTGTTTCTTGACTCCACACGCGG
TGAGGACAAAGGCAGGGGGCAGGTCGCGGAAAAGGTCGCGCTGGGTGCGA
TATTTGCAGACTGCAAAGATCCAGGAGACACAAAAGATGTTTTGAAATAT
AATGATAGGAATTCTTCCCCATTGCTGCTGCTCGGTTTCGTATCGACTTC
GATAGGCACGGCATCAGCAGAACCGACTCGGCAAGTGCCCCCAGCGATAG
GACGAGTTTGCGGGAACCTCTTGCTGCTCCGTTTGAGTGATTTAGACGGC
TCACTGAAGTTTTTCTGGAATTGTTGCACGAAGGGTAAAATACGAAGAGG
TCGGCGCTTCAAGACTGCGTTCATGTAGGTCTCAATCGTCGTTTGCCTTT
CTGCTGTCACTTGCGGATCCAGGTTGCTCCCAAACGACAACCAGGGTCTT
TTTGGTGCCAATTTGGCCAAAAGTGGTTCGTATCCCTCGTAGAAACTCAG
CGTCGAGTCAAATTCACAGATCTCCGAAAATCGTTTGTTCACATCCCTTG
AGCGGCCATTCTGATCAAGCCGAAGGCGGTACAGCACGTACTCGGCCCCG
TCACTATCCTGCACTAGCGAAAATGAAGGGTGTGTGCGGTACCCAGCACG
GAATTGTCGAGTGATCAGGCGAAAGAAGCATGCTAGGAGAAGATGGAATG
GGCCAAGGCAGTCGCAAAAGAAAAATGAAACAAGAAACGGGCTCCAGAAC
GGGACGAATGCGGGGAGAACGCGAGGGAGGGTGGCAGGGCAGAGGACGCA
GACAACGACGAGGGCGATGACGTGCCAGAGGAAGAGGATGAGGGTGACAC
CGACGTATTTACATGTTGCGTATTGGAATCCTTCAATCTTGGACGGCCTA
CACGGCATTTAGCTGCTGTCACAAGCTCCCATTCTTGTCGTTCGCTTTTA
CTGAGGCCTTTGATCCAAAGAGCTTTCCGTCTCGTGATTGTCGTCCCTGG
GAGTGTTCTGAGGTAAAGGAGCCTCGTTTGAGCTGGAGACGTTGTCTACA
TTCCTAAGGAGATCCTTCGCCGAAGCTGTATTCACCCCCACCAGAGGCCA
TGCGGCCTCTGTTCTATCGCAAGCATCGCTGACTCCGCGTCGCCGAGCCC
GTCGGCCGCCTCCCCGCCTTGCCTGCCAATTTTGGCGACACACAGTAGTC
GCTGTGCTGTTTCTTGACTCCACACGCGGTGAGGACAAAGGCAGGGGGCA
GGTCGCGGAAAAGGTCGCGCTGGGTGCGATATTTGCAGACTGCAAAGATC
CAGGAGACACAAAAGATGTTTTGAAATATAATGATAGGAATTCTTCCCCA
TTGCTGCTGCTCGGTTTCGTATCGACTTCGATAGGCACGGCATCAGCAGA
ACCGACTCGGCAAGTGCCCCCAGCGATAGGACGAGTTTGCGGGAACCTCT
TGCTGCTCCGTTTGAGTGATTTAGACGGCTCACTGAAGTTTTTCTGGAAT
TGTTGCACGAAGGGTAAAATACGAAGAGGTCGGCGCTTCAAGACTGCGTT
CATGTAGGTCTCAATCGTCGTTTGCCTTTCTGCTGTCACTTGCGGATCCA
GGTTGCTCCCAAACGACAACCAGGGTCTTTTTGGTGCCAATTTGGCCAAA
AGTGGTTCGTATCCCTCGTAGAAACTCAGCGTCGAGTCAAATTCACAGAT
CTCCGAAAATCGTTTGTTCACATCCCTTGAGCGGCCATTCTGATCAAGCC
GAAGGCGGTACAGCACGTACTCGGCCCCGTCACTATCCTGCACTAGCGAA
AATGAAGGGTGTGTGCGGTACCCAGCACGGAATTGTCGAGTGATCAGGCG
AAAGAAGCATGCTAGGAGAAGATGGAATGGGCCAAGGCAGTCGCAAAAGA
AAAATGAAACAAGAAACGGGCTCCAGAACGGGACGAATGCGGGGAGAACG
CGAGGGAGGGTGGCAGGGCAGAGGACGCAGACAACGACGAGGGCGATGAC
GTGCCAGAGGAAGAGGATGAGGGTGACACCGACGTATTTACATGTTGCGT
ATTGGAATCCTTCAATCTTGGACGGCCTACACGGCATTTAGCTGCTGTCA
CAAGCTCCCATTCTTGTCGTTCGCTTTTACTGAGGCCTTTGATCCAAAGA
GCTTTCCGTCTCGTGATTGTCGTCCCTGGGAGTGTTCTGAGGTAAAGGAG
CCTCGTTTGAGCTGGAGACGTTGTCTACATTCCTAAGGAGATCCTTCGCC
GAAGCTGTATTCACCCCCACCAGAGGCCATGCGGCCTCTGTTCTATCGCA
AGCATCGCTGACTCCGCGTCGCCGAGCCCGTCGGCCGCCTCCCCGCCTTG
CCTGCCAATTTTGGCGACACACAGTAGTCGCTGTGCTGTTTCTTGACTCC
ACACGCGGTGAGGACAAAGGCAGGGGGCAGGTCGCGGAAAAGGTCGCGCT
GGGTGCGATATTTGCAGACTGCAAAGATCCAGGAGACACAAAAGATGTTT
TGAAATATAATGATAGGAATTCTTCCCCATTGCTGCTGCTCGGTTTCGTA
TCGACTTCGATAGGCACGGCATCAGCAGAACCGACTCGGCAAGTGCCCCC
AGCGATAGGACGAGTTTGCGGGAACCTCTTGCTGCTCCGTTTGAGTGATT
TAGACGGCTCACTGAAGTTTTTCTGGAATTGTTGCACGAAGGGTAAAATA
CGAAGAGGTCGGCGCTTCAAGACTGCGTTCATGTAGGTCTCAATCGTCGT
TTGCCTTTCTGCTGTCACTTGCGGATCCAGGTTGCTCCCAAACGACAACC
AGGGTCTTTTTGGTGCCAATTTGGCCAAAAGTGGTTCGTATCCCTCGTAG
AAACTCAGCGTCGAGTCAAATTCACAGATCTCCGAAAATCGTTTGTTCAC
ATCCCTTGAGCGGCCATTCTGATCAAGCCGAAGGCGGTACAGCACGTACT
CGGCCCCGTCACTATCCTGCACTAGCGAAAATGAAGGGTGTGTGCGGTAC
CCAGCACGGAATTGTCGAGTGATCAGGCGAAAGAAGCATGCTAGGAGAAG
ATGGAATGGGCCAAGGCAGTCGCAAAAGAAAAATGAAACAAGAAACGGGC
TCCAGAACGGGACGAATGCGGGGAGAACGCGAGGGAGGGTGGCAG back to top
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