rna8608, rna8608 (mRNA) Nannochloropsis gaditana

Overview
Namerna8608
Unique Namerna8608
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length841
Alignment locationKK037249.1:411832..412381 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100039g24.4420.mrna
Orig protein idgnl|cribi|Naga_100039g24.4420
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:411832..412381 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100039g24gene8343Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22082.1cds8581Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8608rna8608-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8608 ID=rna8608|Name=rna8608|organism=Nannochloropsis gaditana|type=mRNA|length=841bp
CATGACGACATACCCTCCTCCGCAACACCCCCTCTCGCATCCTTCTCAAG
GTCAACCTCAAACCTCACAATTTCCTCACCAAGGCCCCTATGGACATCAT
TCTCCATATGATAATCGCCCACCCGCTCAAGCGTATGCACAAGAGCTTGC
TCCTGGTAGCCTTGGCAGCAGTGGTTACATAGGGCACGGTCACGGGCAGG
CAAGGCATGAGGGAGCGCAAAATCCGACTGCGCTTTCGCACCTACAAACC
TCATCGCCTCATCAACGCCATCACGACAGAAATCCATACCTTGTGCCTGA
TTATGGGTATCACTAGGAAGGGTATCATTCGTGGCAAATGAAGGAAGGAA
GGTAGTAAATGGTATCATTCGTGGCAAATGGAGAAAGGAAGCAATCGGAG
AGGATAGGATTTCAACCCATTGTGTGTCTTCCTTGTTCTTCATAGAGAGA
TAAGGCACGAAAAGGCATAGATAGATAACGCAGAAAAACATGGACAGGGG
CCGCTTGCGATTCTCGAATAGCAAAAGTCAAGCAAGCCGCAAGGAGCTAA
AGGTTGTGGCGGCGTTTCCCTAGTCGCCACATCTATGGTACCTACTTCTG
CAATTTGCTCATTAATAGAATACAGTAAATAGACAAGAGTCCTCATAGTA
GCAAGCTTAATGTAGGTCAGTAGTGTCAAAGTGAAAGCAATCAGAATAAG
ACACACATTTTCCCGAAAGTCATAGGCAATTGTCACACATCTGTGAGGAC
AGGCAATACCCATTTATGACATCAAGACAAGACAGTGTCATCAATCAAAT
ATCAATTCTACATGGAGAAATCGATAAATAGGATTCATGAA
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protein sequence of rna8608

>rna8608-protein ID=rna8608-protein|Name=rna8608|organism=Nannochloropsis gaditana|type=polypeptide|length=78bp
MRPTGRPWPVSQAFADPRPLPRALAQSHQTSSSFSHPHAHQGSHSPTRPP
AHPAAHSPPHPRPDPEAGTVSVASSFCR
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mRNA from alignment at KK037249.1:411832..412381-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8608 ID=rna8608|Name=rna8608|organism=Nannochloropsis gaditana|type=mRNA|length=550bp|location=Sequence derived from alignment at KK037249.1:411832..412381- (Nannochloropsis gaditana)
ATGCGTCCGACGGGCCGCCCCTGGCCCGTCTCCCAAGCCTTCGCCGACCC
GCGCCCCCTCCCGCGCGCCCTCGCGCAATCCCACCAAACCTCCTCGTCCT
TCTCCCACCCGCATGCCCACCAGGGCTCCCACTCGCCGACCCGCCCGCCA
GCCCACCCGGCAGCCCACTCGCCGCCCCACCCGCGCCCCGACCCAGAGGC
CGGGACCGTTTCAGTGGCCTCCTCGTTCTGTCGTTAGGGAACTCGGCGGA
TCTTCCCCCAGCCTCCTCGGGCGACCGGAGGGACGTTCCCGCTCAGCCTC
ACTGCCTTCGCTTTCCATGCGGTCGCCGAGTCGGGCTCCGTCTCGAGTGC
CCAGCCTGGCCGAGGTCGTCCGCCATGAGCTGCTGGAGGAGACGCATGGC
TTGGGCTTCGAGGAGGACGATGACATTTGGCACCGCTCCCTGCAAGAGGG
ATCAGGGAAGGCAGGTGCCGAGAGCGGACCCAGAGTGACCATCGCCAATC
CCGGCGTGGGCGAAACCTTTTACAACGGAGCCGTCGCTTTGATTCGCTGG
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Coding sequence (CDS) from alignment at KK037249.1:411832..412381-

>rna8608 ID=rna8608|Name=rna8608|organism=Nannochloropsis gaditana|type=CDS|length=237bp|location=Sequence derived from alignment at KK037249.1:411832..412381- (Nannochloropsis gaditana)
ATGCGTCCGACGGGCCGCCCCTGGCCCGTCTCCCAAGCCTTCGCCGACCC
GCGCCCCCTCCCGCGCGCCCTCGCGCAATCCCACCAAACCTCCTCGTCCT
TCTCCCACCCGCATGCCCACCAGGGCTCCCACTCGCCGACCCGCCCGCCA
GCCCACCCGGCAGCCCACTCGCCGCCCCACCCGCGCCCCGACCCAGAGGC
CGGGACCGTTTCAGTGGCCTCCTCGTTCTGTCGTTAG
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Synonyms
Publications