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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100039g31.4438.mrna |
| Orig protein id | gnl|cribi|Naga_100039g31.4438 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:383738..385947 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8603 ID=rna8603|Name=rna8603|organism=Nannochloropsis gaditana|type=mRNA|length=3521bp
TGTTGTTTATTGATTGTGTAGAACTTTGATGACTGTGTTGGTTTGGTAAA
AATGTGCCGGTATCCTTGCGCTTATTCATTCTTCGCCTGTATTTTCCCAC
CCGTGTAGAAGAAACAGTCTGAAAACGCACAAGCTCGTGCTTCTGGTTGG
AAATTGAAGCTCAAACGCTCTGCTCAGTATCAGTGTATGGATCATTCGAC
AGCTGTACCAGCCTCGTCCATCACAAGCACAACTAATTTTGGAGGTAGCA
CTGGCAACAGCGTCGCCTCTGCCAACACCAGTACCATCATCAAAACCGGC
AAGCCCAGCATCATGGCGCCTGGATTTCCTTCTCCGCCCTTCAGTCTCCC
CGGTGCCTCCCTCTACGGCATGGGTTTCCCTCCCCCTGCACATTCCGGGA
ACGCCACCCACCTCCCTCAAAATCTCTTCGCTCCCCCGCCCGGCGTGGGC
GGAGGAGTGATGGACCCCTTCCATCCCCAGGGTGGCCCACAGCAACATTT
GCACAACCTTCACCGCCCTGGTGGAGACATGTTGGCCGCTGGGCACAGCA
GTGGGGGAGGCGGGGGAGGCGGAGGAAGGGGAAGAGGCGAGCAACATCGG
GGGGGGGCTGCCCGGCCTTCGGAGGAAGGCCCCGTGGTCTCCTCCGGGCC
ACTGGTGGGCGGGACCGAAAAACGCCGAGCTGTCCGAAAATGGCGGCCGC
AGGAAGACGAGCTCTTGACGGCATTGGTGCGTGAGTACGGAACCAAGCAC
TGGGGCATCATCTGCACCAAATTCGAAGGGAGGACCGGGAAACAGTGCCG
GGAGCGGTGGCACAACCAGTTGGATCCGCACATCAAGAAAGATGCTTGGA
CCAAGGATGAGGAGGATTTGCTGTTGAAGGCACACGCACAGTTCGGAAAT
CGGTGGGCTGAGATTGCCAAGGTATTGCCGGGGCGGACGGACAACGCGAT
CAAGAACAGATGGAACTCGGCCAAGCGCCGGCTCTCCCGCCAATCATACC
CAGACGGGGACGGGGGCGAGGACGACGATGACTCGGCCTCGGAGGAGGAT
GACACGGAGGACGAAGACGACGGGGGCGGAGGCCGGGGCGGTGGGAAATT
CTCGGGCGTCGGGGTTTCCCGCGGGGGCTTTGTGTCTCCTTCCCCGCCCT
CGACGAGGGAGAAGGACAAGGGGCGGCCCGGCAGCCGGACGGGAGGGGGA
TTGACCACCATCAGCACGGGCCTGGCGGGCATCGCGGGCGGTGTCAGGGG
AAGTGGCCGCAAAAGTCCCAAGGCCCTCCCCCCCGCCGGGAGCCGCGTCC
CCTCCCCTTTCTCCCCAATGGCCGCCTCCCCGGGGGCCAACAGCGGACTC
TCGCCGTCCCCCAACCCTATGATGGCCTACCAAGGACTCTTCAACAAGGC
GCAGATGGGCGCCTTGGTGGGGACGGGGGGACAAGCGAACTCTCACGCAG
GCACGAGGAACTTCTCTTCCTTGCCGGGCTTTCCCGCCTTGAACGCTTTT
GCCCCACACGGTCCTTTCGGCTCCCAGACCCCCGCCCACTCGCCTCCCTT
CTCCAATTTGACGTCCATACCGGCCCAGAGCCCCCCCAATTTCCCTTTCT
TTGATTTCAATGCCGCTGCCGCCGCCGCTGCCGCCGCCGCCGCCGGGGGC
TTCCCCGGCTTCCCAATGGGTGCTCCCGCGGGCCCCAGCCCCTTCTCTCC
CTTGAATGCCTACCAGATGGCTCTCTTCCAGCAGCAACATCAGCAACAGC
TCCAGGCGGCGCACATGGCCATGTCCATGCAACAACAACAACAACAACAA
CAACAACAACAGCAACAGCAACAGCAACAGCAGCAACAGCAACAACAGCA
ACAACATGCACCCGCGCCTGTCCCCCCTTCCCGCCGACGCGCCTCTCCCA
GCGCGCAAGCCAAGCGGCAACAACAGCAGGAGCAGGACCTGAAAATCCCC
CTCTCCTCTGCCACTCATCCCCTGGAAGGCCGGAAAGACCGCCAGAACGG
GAGCGGGGAGAAGAGGGACGGGTCATCTCCCTCCTCCTTGGGCCAGGCCC
TGACTCCGCAGGCGGACAAAGCGGGCGTTGGGGAGGCAGGGAATATTCAA
AAACCGTCCTCAGGCTCCGCCAGCTCCACACCCCCCACCGGTCACTCCGC
CTTTCAGAGCACGTATCCAGGGAGCGCTAGCAGCAGCACGGGCGGGAGCC
ATGCTGGGAGCGCGGAGAAGAAAGGGGCCAAGACCACGGGGGATGAGACG
GACGTCCTGGCTGCCTTGGTCTCGCTTGGGAGCCACCCGCGATCCTCCTC
CTCCGCCTCGAGCTCGCCCAAGGCGTCGGAGGGCGGGGACGGAAGCAGCA
GCAGCAGCCGGGTGAGCGACAGTGGGAGTGTGGGGGGGGAGGAGGGACCG
GCCGGGGGCTTCGGAGGGGGGGACAAGGCGGGGGTCAGGGCCTCGGAGGT
GGAAGCGGGGGCGAGGGACGAAGGAGGAAGGGAGAAGGAGGAGGGGGAGG
CGGGTATGGAGGGCAGGAGGCGGGAGGAGGAGGAATCGGGGAAGACGGCT
GCCGAGATTGCTACCGGCGGGGAGGTGGGGAAGGAGGGAGGGGCCCAGGA
GAGGGCTCAGGAGGATGCTGGCCCGCTTTCCGCCCTACTGGGATCCAGGA
GGGAAGGGGAAAAGGACGTGGGCGAGGAAACATGCGGGCAGGAGGAGGTG
GGTGCCGGCGCGGGGGGCGGGGAGGAATGGAAACGCAAGGCTACTTCCGA
GGAAATGGAGGGATCAGGCTGCGGCAAAAAACTCCGGGTAGGGGAGGACG
ATAAGCAGGGGCAGGAAAGCGTCATACTGGGCATGGCGATGGGTGCGAAA
AAGCCGTTGGCGGAGGAGGAGAAGGAGGGGGAGGCGGGCGAGCGGGTCCC
GGCCAAAGAACGTGGGCAGTAGGATCGATGCAAGGAGGGTCAGCTCCATC
CAGGAGGGAAGACGAGAGAGGTGTGCTAGGCTCAAGGGCAGCTTGTCCAT
CGGAGGGACAGGGCACGGGGGGGGGAAATTGGGGGGATATGGTACGACAG
CCATGTATGGGAAGGAAGAAGCTTCTGTTGGCCCACGTCGTCGCTCTTTG
CCTCCTCCACGGCTTCTGTGACGATGACCGGACGTGGATGTCGTAAGTAA
ATATGTTGATGTGTCTGTCATCTTCTTAATTGCGTGAGAAGACAGGGAAG
GAATATTGAATTCATGCTTTCTATCGAAAAACACGAGAATAAAACGAAGG
GGAGGCATGGTGCTTTGAGGCCTGTGGAAGGTCCATGCAGCAGTGTTCTT
CCTAGAGATCGAAGGCGTAAAGGGAGAATGTTCGAGAAAAGAAGACCGAC
GACGACTAGAAGAGGTGCGGCGTGGAGACGTGCGTAAGGGGTCGAAATTT
CTTTTCTGTTTTCGAGGAATGAGATTCTCACACCAAGAGGAAGCGGAGGC
CATCGACCGAGAGGCATCCCCCTCTTGATTGGCATACTATCTTGTTATAA
ACACCACGGTCACCCAAGTTC back to topprotein sequence of rna8603 >rna8603-protein ID=rna8603-protein|Name=rna8603|organism=Nannochloropsis gaditana|type=polypeptide|length=308bp
MRRLSDLVNPVLGFLSPWKGSKSSTPSDPIPRASSGGKKVGASGSKRAST
TPRAKTPSALGKRSRRSSISSSKGETPASKQQKTHATAEKSALKKKGMTP
STKVKSSTLALGKSASKGTPTKKGAKTPAASSKKAISTTGKKGAKPSTPP
TPAVPARKTATTPVPPPKKGAVKKSGPAPIVPRRPSARVALAAKATMAAP
ASAASAKAKSSGGSKALSKKAAPKKKVPVKKTAKPVAKKATSTAKKVAPA
PAPAKPAAPKPVASKAAPPKKTVAKKATKPVPKKKAVGPAKKALPKKTSG
RPTRAAKK back to topmRNA from alignment at KK037249.1:383738..385947+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8603 ID=rna8603|Name=rna8603|organism=Nannochloropsis gaditana|type=mRNA|length=2210bp|location=Sequence derived from alignment at KK037249.1:383738..385947+ (Nannochloropsis gaditana)
ACACTTGTCACACACATCACATCAGCCTCCTTGCAAATTGTCAACACTCT
TCCATTACTGCCATGCGACGCTTGAGCGACTTGGTCAACCCGGTAAGTCT
TTGTCACCATCCTAGTAAAGGGGGGTAGAGCGTAGCGAGTGCTCGATGGG
CACGTGAGACTTGGGGCGGCAATGCGCAGGCGGCCCACCTCGGCTGACTA
GACGACGCATCACCAGCAAGTTTCGATGCATCCTCGGCGTGCCGAAAGTA
GATTTTGTTTCGTACACGACGGATTTTGTAGAGGGCTACCAGGACGCCTT
CATCCTTGATGTGCTTTTTTGCCCGCCTCAATCCTCACATCTGTCCACTG
TCTCCCATATACCTCTTATGCATGGGCGCAGGTGCTGGGTTTTTTGTCTC
CTTGGAAAGGCAGCAAGAGTAGCACCCCCTCCGACCCTATCCCACGCGCT
TCTTCTGGCGGCAAGAAGGTGGGAGCTTCAGGGAGCAAGCGTGCTTCGAC
CACGCCCCGCGCCAAGACGCCATCCGCTTTAGGCAAACGCTCCCGACGGT
CTTCCAtaagcagcagcaaggggGAAACGCCCGCTTCCAAGCAGCAAAAG
ACGCATGCAACCGCGGAAAAATCTGCgctgaaaaagaaggggatgacgcc
ctccaccaaggtGAAAAGCTCTACGCTGGCTCTGGGGAAATCTGCGAGCA
AGGGGACTCCCACCAAGAAGGGCGCGAAGACGCCAGCCGCAAGCAGCAAG
AaggccatctccaccaccggaaagaaaggggcgaAGCCATCCACGCCGCC
CACTCCGGCCGTGCCGGCCCGCAAAACAGCCACGACCcctgttccccccc
ccaagaagGGCGCTGTCAAGAAGTCTGGTCCCGCACCCATTGTCCCCCGG
AGGCCCAGTGCCCGTGTCGCCCTTGCGGCAAAGGCTACGATGGCTGCTCC
TGCCTCTGCAGCTTCGGCCAAGGCGAAAAGCTCCGGTGGCAGCAAGGCCC
TTTCCAAGAAAGCCGCAcccaagaagaaggtgcCCGTGAAGAAAACGGCC
AAGCCGGTCGCCAAGAAAGCCACAAGCACCGCCAAGAAAGTAGCGCCTGC
GCCCGCCCCTGCTAAGCCTGCTGCGCCTAAGCCCGTCGCTTCCAAAGCCG
CGCCGCCGAAGAAAACAGTGGCCAAAAAGGCAACCAAGCCGGtgccgaag
aagaaggctgtGGGCCCCGGTGCGTGGTCTGGGGGAAtgagggggatggg
agcaGGACGATGGCTCTGGCAGGGTGCAAATCATGCCCTTTGTTTCTTTG
GCCGCTCAATACTCGCGTGAGCCCCTTCGGCTCGTCTGCATGCTTGTTAT
CGGCACCTTGGTGTTTAATcgtttccccctttcccactcTCTCCACAGCC
AAGAAGGCCCTGCCCAAGAAGACCTCAGGACGGCCCACGCGAGCAGCAAA
GAAGTGaggcgaaaggaagaaggaaggagggagtagggtgggtggtggga
ggaggaaaaggggggaacctaatggggagggaaggaggaagggcggagag
gacgaTCTAGCTGAATCGGAAGCCCGCTGTCGGTCACAGCAATGGTGAGA
ATAGGGGGACTGGTAAGTGATTGAAGAGGGCctcgaaggaaaggaggctg
TCCGCGTTCGGAGTGTAAGTAGGACGAGGGACAGGGCGgccggagggaag
agaaaggcaagggGTTGTCTccggcagggggaggggggtcaCGAGACGGA
AGAGGCGTTTTGCACCTGTCGTGGACGGCTATCAAGCATGAGGGCAGATA
TTTTGTTGACGATACAGGAGACCGAAATATTGGAGAGTGCTGAGTGAGAG
CCTAAGGGGCCGTGTATTAAGGGAAaggcagaaggaggcagaggaaaagT
ATGTATGTCGGAGTGTATTTTATGGCGGAAGTGTCGAGGGCTGGCCTTGA
GTGCAAGCCGGCTCCACGAAGACACGGGTCAGTGGTGAGCTAAGACCAGA
AGGCAGAGCGGAAGATTGTAAGCGGCGCGATAAGGAGGACTCGGATGACA
AGGCGAAGGATGGTGGTGTTTCGGATTAAAGAACgcaaaggggaggcgga
agataAGGGCAACACGCAAGAAAATGGGCCACCGTCGCGTGTCTTGTGTC
GGCAGCTTTCCTTGACCGATAAAGAAAGGGTGCAAAGAACAACAGCCCTC
CATCAACAGA back to topCoding sequence (CDS) from alignment at KK037249.1:383738..385947+ >rna8603 ID=rna8603|Name=rna8603|organism=Nannochloropsis gaditana|type=CDS|length=2781bp|location=Sequence derived from alignment at KK037249.1:383738..385947+ (Nannochloropsis gaditana)
ATGCGACGCTTGAGCGACTTGGTCAACCCGGTGCTGGGTTTTTTGTCTCC
TTGGAAAGGCAGCAAGAGTAGCACCCCCTCCGACCCTATCCCACGCGCTT
CTTCTGGCGGCAAGAAGGTGGGAGCTTCAGGGAGCAAGCGTGCTTCGACC
ACGCCCCGCGCCAAGACGCCATCCGCTTTAGGCAAACGCTCCCGACGGTC
TTCCAtaagcagcagcaaggggGAAACGCCCGCTTCCAAGCAGCAAAAGA
CGCATGCAACCGCGGAAAAATCTGCgctgaaaaagaaggggatgacgccc
tccaccaaggtGAAAAGCTCTACGCTGGCTCTGGGGAAATCTGCGAGCAA
GGGGACTCCCACCAAGAAGGGCGCGAAGACGCCAGCCGCAAGCAGCAAGA
aggccatctccaccaccggaaagaaaggggcgaAGCCATCCACGCCGCCC
ACTCCGGCCGTGCCGGCCCGCAAAACAGCCACGACCcctgttcccccccc
caagaagGGCGCTGTCAAGAAGTCTGGTCCCGCACCCATTGTCCCCCGGA
GGCCCAGTGCCCGTGTCGCCCTTGCGGCAAAGGCTACGATGGCTGCTCCT
GCCTCTGCAGCTTCGGCCAAGGCGAAAAGCTCCGGTGGCAGCAAGGCCCT
TTCCAAGAAAGCCGCAcccaagaagaaggtgcCCGTGAAGAAAACGGCCA
AGCCGGTCGCCAAGAAAGCCACAAGCACCGCCAAGAAAGTAGCGCCTGCG
CCCGCCCCTGCTAAGCCTGCTGCGCCTAAGCCCGTCGCTTCCAAAGCCGC
GCCGCCGAAGAAAACAGTGGCCAAAAAGGCAACCAAGCCGGtgccgaaga
agaaggctgtGGGCCCCGCCAAGAAGGCCCTGCCCAAGAAGACCTCAGGA
CGGCCCACGCGAGCAGCAAAGAAGTGaATGCGACGCTTGAGCGACTTGGT
CAACCCGGTGCTGGGTTTTTTGTCTCCTTGGAAAGGCAGCAAGAGTAGCA
CCCCCTCCGACCCTATCCCACGCGCTTCTTCTGGCGGCAAGAAGGTGGGA
GCTTCAGGGAGCAAGCGTGCTTCGACCACGCCCCGCGCCAAGACGCCATC
CGCTTTAGGCAAACGCTCCCGACGGTCTTCCAtaagcagcagcaaggggG
AAACGCCCGCTTCCAAGCAGCAAAAGACGCATGCAACCGCGGAAAAATCT
GCgctgaaaaagaaggggatgacgccctccaccaaggtGAAAAGCTCTAC
GCTGGCTCTGGGGAAATCTGCGAGCAAGGGGACTCCCACCAAGAAGGGCG
CGAAGACGCCAGCCGCAAGCAGCAAGAaggccatctccaccaccggaaag
aaaggggcgaAGCCATCCACGCCGCCCACTCCGGCCGTGCCGGCCCGCAA
AACAGCCACGACCcctgttcccccccccaagaagGGCGCTGTCAAGAAGT
CTGGTCCCGCACCCATTGTCCCCCGGAGGCCCAGTGCCCGTGTCGCCCTT
GCGGCAAAGGCTACGATGGCTGCTCCTGCCTCTGCAGCTTCGGCCAAGGC
GAAAAGCTCCGGTGGCAGCAAGGCCCTTTCCAAGAAAGCCGCAcccaaga
agaaggtgcCCGTGAAGAAAACGGCCAAGCCGGTCGCCAAGAAAGCCACA
AGCACCGCCAAGAAAGTAGCGCCTGCGCCCGCCCCTGCTAAGCCTGCTGC
GCCTAAGCCCGTCGCTTCCAAAGCCGCGCCGCCGAAGAAAACAGTGGCCA
AAAAGGCAACCAAGCCGGtgccgaagaagaaggctgtGGGCCCCGCCAAG
AAGGCCCTGCCCAAGAAGACCTCAGGACGGCCCACGCGAGCAGCAAAGAA
GTGaATGCGACGCTTGAGCGACTTGGTCAACCCGGTGCTGGGTTTTTTGT
CTCCTTGGAAAGGCAGCAAGAGTAGCACCCCCTCCGACCCTATCCCACGC
GCTTCTTCTGGCGGCAAGAAGGTGGGAGCTTCAGGGAGCAAGCGTGCTTC
GACCACGCCCCGCGCCAAGACGCCATCCGCTTTAGGCAAACGCTCCCGAC
GGTCTTCCAtaagcagcagcaaggggGAAACGCCCGCTTCCAAGCAGCAA
AAGACGCATGCAACCGCGGAAAAATCTGCgctgaaaaagaaggggatgac
gccctccaccaaggtGAAAAGCTCTACGCTGGCTCTGGGGAAATCTGCGA
GCAAGGGGACTCCCACCAAGAAGGGCGCGAAGACGCCAGCCGCAAGCAGC
AAGAaggccatctccaccaccggaaagaaaggggcgaAGCCATCCACGCC
GCCCACTCCGGCCGTGCCGGCCCGCAAAACAGCCACGACCcctgttcccc
cccccaagaagGGCGCTGTCAAGAAGTCTGGTCCCGCACCCATTGTCCCC
CGGAGGCCCAGTGCCCGTGTCGCCCTTGCGGCAAAGGCTACGATGGCTGC
TCCTGCCTCTGCAGCTTCGGCCAAGGCGAAAAGCTCCGGTGGCAGCAAGG
CCCTTTCCAAGAAAGCCGCAcccaagaagaaggtgcCCGTGAAGAAAACG
GCCAAGCCGGTCGCCAAGAAAGCCACAAGCACCGCCAAGAAAGTAGCGCC
TGCGCCCGCCCCTGCTAAGCCTGCTGCGCCTAAGCCCGTCGCTTCCAAAG
CCGCGCCGCCGAAGAAAACAGTGGCCAAAAAGGCAACCAAGCCGGtgccg
aagaagaaggctgtGGGCCCCGCCAAGAAGGCCCTGCCCAAGAAGACCTC
AGGACGGCCCACGCGAGCAGCAAAGAAGTGa back to top
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