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Properties
| Property Name | Value |
|---|
| Product | glycosyl family 5 |
| Orig transcript id | gnl|cribi|Naga_100033g10.8411.mrna |
| Orig protein id | gnl|cribi|Naga_100033g10.8411 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:234515..237274 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna86 ID=rna86|Name=rna86|organism=Nannochloropsis gaditana|type=mRNA|length=979bp
AACGGCCTGATAATTTATTGGTATTGAGCATGCCTTTTGTTGACATCGGT
TGTAATCTAACCGATCACATGTATCAAGGAAAGTATAATGGGAGCCAGAA
ACATCCGCCGGACCTGGACAGGGTCCTAGCACGTGCATGGGAAGCGGGGT
TGAGCCACATCATCATCACAGCTGGTACAGCCAATGAGGCCCGTACAGCA
TTAAATCTGGCAAGCGAAGATCCCCGTTTATTCGCCACTGTGGGCGTCCA
TCCTACTCGCTGCAAAGAATTGGTGGAGGCTGAGGATGGAATGGCAGCAC
ACATGGACGAGCTCCTTGACTTGATCAAAGATGGGCAAAAGACAGGGAAT
GTTGTTGCCATTGGAGAGTGCGGTTTGGACTACGATCGTTTGCATTTTTG
TGAGAAATCTACGCAACTGAAGGGGTTTGAAGCCCAATTTACCTTAGCTG
AGGAGACAGGGTTACCCATGTTCCTCCATAACCGAAACTGTGGGGAGGAC
TTCGTCCACATACTGCAACAGCATCGGCACAGGTTTTCTCAAGGTGTAGT
GCACTCATTTACGGGGCCTTGCACCGAAGCACAGACGTTGTTAAGCATGG
AGAAGGTTTATATAGGGCTAAATGGATGCTCCTTTAAAACTGGGGACCAG
CTTATGACGATCAAGAATAGCATCCCTTTGGAAAAGACATTGCTTGAGAC
AGACGCACCTTGGTGCGATGTACGCCCCACTCATGCAGGGACCAAATTTT
TGACGTCGGGTGGGTCTGCGGAGGTTGCGACGTTTGAGACGGTCAAGAAG
GAGAAGTGGTCAAGGGATAAGTGCGTCAAGGGCCGCAACGAGCCCTGCCA
TATCCGGGGTGTGGCACAGATCTTGGCTGGGATTCATGACACCACCTTGG
CCCATGTAGAGGAGGTATGTTATGAAAACTCAATGGCATGCTTTCCCGGG
CTGACATTAAGAAACGAAGGATTTTGACA back to topprotein sequence of rna86 >rna86-protein ID=rna86-protein|Name=rna86|organism=Nannochloropsis gaditana|type=polypeptide|length=588bp
MQSLALKPHRLPQVAPTLPFVRNGFQCVNEATMVQPCQNSTRKKYRCFIQ
LAILTIPALMLLFPEVKDRLGSSGFFPSVHRNLKHDMHSSAAKSFHGAKD
ALDQFVVRKKDRLFLNGEAFRFISFNVPNLHVVEDETWHRVSQWEQEDAL
ETISRMGGQVVRIYPMSIVGGLNNGTYTHILGKGMYNEALFQDLDRLLVV
AHRLEIRVIIPFIDHWEWWGGVSQFARLFNASFSDFYESPLIKAGFLDFV
EYLLMRKNTLTGQLYRDDPTILAWETGNELDYVNDDTPHTNTHLSAPLML
PSLAVMDKWTSELAAFLKKRDPNHLVIDGRLLNNRDVSRMQLLDPHIDLI
SDHFYPNTDFSFEARLTRMLSFSKRHKPFLVGEFGMVSSQTMDALAKRVI
EEPAVAGALLWSLRSHSAQGGFYWHYEYDDFWAYHYLGFDSNPGTEEKKV
MAVVEKHAYAIRNQTVPAPTIPRPPKLIDGSTTQAIAWQGSVGAQHYELE
RKEVALGYQLDTGMTASGADRTSTWQEGKWIRISNNLSDSMNPYVPFMDA
TAQPGKIYEYRIYAVSSAGRSAPSPTMSIHASSAASRP back to topmRNA from alignment at CM002455.1:234515..237274+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna86 ID=rna86|Name=rna86|organism=Nannochloropsis gaditana|type=mRNA|length=2760bp|location=Sequence derived from alignment at CM002455.1:234515..237274+ (Nannochloropsis gaditana)
TGGGTGCTTGGCCCGCGCAGCCTCTCTTTGGGTCCTTTGCTGATTGATAC
CATCTTGTAAATAGCGCAGACGTGATCGCATTGGTAGGTCATATTTTCCG
CACTTCTCCTGCGATGGCATAAGCTTGGAGACCCATATGAAAGGTACGGA
CTTCGAGCCTTCCACTTCTACCCGTGTATTTCAAAAATAAAATTATGATA
ACCTTTCAAACGATATGATGAATAATACAGATAGAGGAGCATATGTGCTC
AACCAAAGGGCCTTCTTTGTGGCAACATAGGAAGGAGAATCTGGCGGTTA
GAAAAGAACCTCCCACCAATTGTCATGCAGTCCCTGGCTCTAAAGCCACA
TAGACTGCCTCAGGTTGCTCCTACACTCCCATTCGTTAGAAATGGATTCC
AGTGTGTAAACGAGGTATGGCTATGTGGTCTAAATTGGGGATATTTTGTA
AAGAGAGGAAACGATTCGAGCGTACATCAAATAACTTCACATGCCACAGG
CCACAATGGTTCAACCATGTCAAAATTCAACTCGGAAAAAGTATCGTTGC
TTTATTCAGCTTGCGATCCTCACTATTCCAGCGCTTATGCTGCTCTTTCC
GGAAGTAAAAGATCGATTGGGCTCGTCGGGCTTTTTCCCATCTGTGCATC
GCAATCTCAAACATGACATGCATTCAAGCGCAGCAAAATCCTTTCACGGG
GCAAAAGACGCGTTAGATCAATTTGTTGTCAGAAAAAAGGATCGCCTATT
CCTAAATGGCGAGGCTTTTCGCTTCATTTCGTTCAATGTCCCAAATCTGC
ACGTCGTGGAAGATGAGACTTGGCACAGGGTCTCACAGTGGGAGCAAGAA
GATGCGCTGGAGACGATCTCGAGGATGGGTGGGCAGGTGGTACGCATATA
CCCTATGTCAATTGTAGGAGGCTTGAACAACGGCACTTATACTCACATCT
TGGGCAAAGGAATGTACAACGAAGCTCTTTTCCAAGACCTGGACCGATTG
TTGGTGGTGGCACATCGATTGGAAATCCGTGTCATTATACCTTTTATTGA
CCACTGGGAGTGGTGGGGAGGCGTTTCACAATTTGCTAGGCTGTTCAATG
CGTCATTTAGTGATTTTTACGAGTCGCCACTCATCAAGGCAGGCTTCCTT
GATTTTGTCGAGTATTTGCTGATGCGAAAAAACACCTTGACGGGTCAATT
ATATCGGGATGACCCTACAATTCTTGCCTGGGAAACTGGAAATGAATTGG
ACTATGTGAATGATGACACACCCCACACAAATACGCATCTCTCTGCCCCG
CTGATGTTGCCCAGTCTAGCAGTCATGGACAAGTGGACGAGCGAACTAGC
GGCGTTCCTGAAAAAAAGGGATCCCAACCATCTAGTCATTGATGGGCGTT
TACTGAACAATCGAGACGTGAGCCGGATGCAACTATTGGATCCGCACATT
GACTTGATCTCGGACCACTTTTATCCCAATACTGACTTCTCCTTCGAAGC
GCGCTTGACTCGCATGCTTTCCTTCAGCAAGCGCCATAAACCTTTCTTGG
TCGGAGAGTTCGGAATGGTATCGTCTCAGACAATGGATGCCCTGGCCAAG
CGCGTCATTGAAGAACCCGCTGTAGCCGGGGCATTACTTTGGTCCCTTCG
GTCGCACAGTGCTCAAGGTGGATTCTATTGGCACTACGAATATGATGATT
TTTGGGCGTATCACTATCTAGGTGAGAACATGAGACGTCCTGAAAAAAGT
TGCCGCTGGCCATCAAGGCATTCGCGTGTCCCCTAAGTTTCTTCATGACA
GCAGCAtatcctctctctctcgttCATCCATTTAATATCATATGACTCCG
TTCATAACAACAGGCTTCGACTCGAACCCAGGCactgaagaaaaaaaggt
gATGGCCGTCGTAGAAAAGCACGCTTATGCCATTCGCAATCAGACGGTGC
CAGCACCCAccatcccccgtcctccaaaaTTGATCGATGGAAGCACAACT
CAAGCAATTGCATGGCAAGGATCTGTGGGGGCGCAACACTACGAGttaga
aaggaaggaagtaGCTCTTGGATACCAATTAGACACAGGCATGACGGCAT
CGGGAGCAGATAGGACGAGCAcgtggcaggagggaaaatggatTCGGATT
TCGAATAATCTCTCAGACAGCATGAATCCTTACGTTCCATTCATGGACGC
CACTGCTCAACCTGGAAAGATTTATGAGTACAGGATTTATGCGGTCAGTT
CTGCAGGGCGCAGTGCCCCATCACCTACAATGTCCATTCATGCATCCTCA
GCTGCTTCTCGACCCTGAGCCCAGTCTCCTTCCCGCGATGTCATGAAGCA
AAACAGGCCATCAAACAAATTTTCCTAATTCTCTCGTGCAACACATTATA
CTCCCCAATGTGATTATGGGTGTTTATGAGCTTCCATTGCACAGCCGCCG
CGGAGGCCGCCACGCATTCCCCGAGACAAGAAGTTTTCCCTCCCTAAAAA
GATATGATGAGTCCTCCGACGCAAGCATAGTGAGAGCACGATCTGTCTGC
TCTAGTCACAAATCTTATGAACCAGAACGCCACATCGGATGGTATATTTG
TATTTTGATGAAGAAAGTCGGGTACGACAAATACAAGAATGCAGCTGACA
AATATGAAAAGTACGGGAAGTAGTCGCAAAAGCAGTATCTAAATTGCTCA
AGTGTTGATACACAATCATTAGGATAGTTCGGCGTTAAAAGAAACATGAA
AATGGTGTGA back to topCoding sequence (CDS) from alignment at CM002455.1:234515..237274+ >rna86 ID=rna86|Name=rna86|organism=Nannochloropsis gaditana|type=CDS|length=5301bp|location=Sequence derived from alignment at CM002455.1:234515..237274+ (Nannochloropsis gaditana)
ATGCAGTCCCTGGCTCTAAAGCCACATAGACTGCCTCAGGTTGCTCCTAC
ACTCCCATTCGTTAGAAATGGATTCCAGTGTGTAAACGAGGCCACAATGG
TTCAACCATGTCAAAATTCAACTCGGAAAAAGTATCGTTGCTTTATTCAG
CTTGCGATCCTCACTATTCCAGCGCTTATGCTGCTCTTTCCGGAAGTAAA
AGATCGATTGGGCTCGTCGGGCTTTTTCCCATCTGTGCATCGCAATCTCA
AACATGACATGCATTCAAGCGCAGCAAAATCCTTTCACGGGGCAAAAGAC
GCGTTAGATCAATTTGTTGTCAGAAAAAAGGATCGCCTATTCCTAAATGG
CGAGGCTTTTCGCTTCATTTCGTTCAATGTCCCAAATCTGCACGTCGTGG
AAGATGAGACTTGGCACAGGGTCTCACAGTGGGAGCAAGAAGATGCGCTG
GAGACGATCTCGAGGATGGGTGGGCAGGTGGTACGCATATACCCTATGTC
AATTGTAGGAGGCTTGAACAACGGCACTTATACTCACATCTTGGGCAAAG
GAATGTACAACGAAGCTCTTTTCCAAGACCTGGACCGATTGTTGGTGGTG
GCACATCGATTGGAAATCCGTGTCATTATACCTTTTATTGACCACTGGGA
GTGGTGGGGAGGCGTTTCACAATTTGCTAGGCTGTTCAATGCGTCATTTA
GTGATTTTTACGAGTCGCCACTCATCAAGGCAGGCTTCCTTGATTTTGTC
GAGTATTTGCTGATGCGAAAAAACACCTTGACGGGTCAATTATATCGGGA
TGACCCTACAATTCTTGCCTGGGAAACTGGAAATGAATTGGACTATGTGA
ATGATGACACACCCCACACAAATACGCATCTCTCTGCCCCGCTGATGTTG
CCCAGTCTAGCAGTCATGGACAAGTGGACGAGCGAACTAGCGGCGTTCCT
GAAAAAAAGGGATCCCAACCATCTAGTCATTGATGGGCGTTTACTGAACA
ATCGAGACGTGAGCCGGATGCAACTATTGGATCCGCACATTGACTTGATC
TCGGACCACTTTTATCCCAATACTGACTTCTCCTTCGAAGCGCGCTTGAC
TCGCATGCTTTCCTTCAGCAAGCGCCATAAACCTTTCTTGGTCGGAGAGT
TCGGAATGGTATCGTCTCAGACAATGGATGCCCTGGCCAAGCGCGTCATT
GAAGAACCCGCTGTAGCCGGGGCATTACTTTGGTCCCTTCGGTCGCACAG
TGCTCAAGGTGGATTCTATTGGCACTACGAATATGATGATTTTTGGGCGT
ATCACTATCTAGGCTTCGACTCGAACCCAGGCactgaagaaaaaaaggtg
ATGGCCGTCGTAGAAAAGCACGCTTATGCCATTCGCAATCAGACGGTGCC
AGCACCCAccatcccccgtcctccaaaaTTGATCGATGGAAGCACAACTC
AAGCAATTGCATGGCAAGGATCTGTGGGGGCGCAACACTACGAGttagaa
aggaaggaagtaGCTCTTGGATACCAATTAGACACAGGCATGACGGCATC
GGGAGCAGATAGGACGAGCAcgtggcaggagggaaaatggatTCGGATTT
CGAATAATCTCTCAGACAGCATGAATCCTTACGTTCCATTCATGGACGCC
ACTGCTCAACCTGGAAAGATTTATGAGTACAGGATTTATGCGGTCAGTTC
TGCAGGGCGCAGTGCCCCATCACCTACAATGTCCATTCATGCATCCTCAG
CTGCTTCTCGACCCTGAATGCAGTCCCTGGCTCTAAAGCCACATAGACTG
CCTCAGGTTGCTCCTACACTCCCATTCGTTAGAAATGGATTCCAGTGTGT
AAACGAGGCCACAATGGTTCAACCATGTCAAAATTCAACTCGGAAAAAGT
ATCGTTGCTTTATTCAGCTTGCGATCCTCACTATTCCAGCGCTTATGCTG
CTCTTTCCGGAAGTAAAAGATCGATTGGGCTCGTCGGGCTTTTTCCCATC
TGTGCATCGCAATCTCAAACATGACATGCATTCAAGCGCAGCAAAATCCT
TTCACGGGGCAAAAGACGCGTTAGATCAATTTGTTGTCAGAAAAAAGGAT
CGCCTATTCCTAAATGGCGAGGCTTTTCGCTTCATTTCGTTCAATGTCCC
AAATCTGCACGTCGTGGAAGATGAGACTTGGCACAGGGTCTCACAGTGGG
AGCAAGAAGATGCGCTGGAGACGATCTCGAGGATGGGTGGGCAGGTGGTA
CGCATATACCCTATGTCAATTGTAGGAGGCTTGAACAACGGCACTTATAC
TCACATCTTGGGCAAAGGAATGTACAACGAAGCTCTTTTCCAAGACCTGG
ACCGATTGTTGGTGGTGGCACATCGATTGGAAATCCGTGTCATTATACCT
TTTATTGACCACTGGGAGTGGTGGGGAGGCGTTTCACAATTTGCTAGGCT
GTTCAATGCGTCATTTAGTGATTTTTACGAGTCGCCACTCATCAAGGCAG
GCTTCCTTGATTTTGTCGAGTATTTGCTGATGCGAAAAAACACCTTGACG
GGTCAATTATATCGGGATGACCCTACAATTCTTGCCTGGGAAACTGGAAA
TGAATTGGACTATGTGAATGATGACACACCCCACACAAATACGCATCTCT
CTGCCCCGCTGATGTTGCCCAGTCTAGCAGTCATGGACAAGTGGACGAGC
GAACTAGCGGCGTTCCTGAAAAAAAGGGATCCCAACCATCTAGTCATTGA
TGGGCGTTTACTGAACAATCGAGACGTGAGCCGGATGCAACTATTGGATC
CGCACATTGACTTGATCTCGGACCACTTTTATCCCAATACTGACTTCTCC
TTCGAAGCGCGCTTGACTCGCATGCTTTCCTTCAGCAAGCGCCATAAACC
TTTCTTGGTCGGAGAGTTCGGAATGGTATCGTCTCAGACAATGGATGCCC
TGGCCAAGCGCGTCATTGAAGAACCCGCTGTAGCCGGGGCATTACTTTGG
TCCCTTCGGTCGCACAGTGCTCAAGGTGGATTCTATTGGCACTACGAATA
TGATGATTTTTGGGCGTATCACTATCTAGGCTTCGACTCGAACCCAGGCa
ctgaagaaaaaaaggtgATGGCCGTCGTAGAAAAGCACGCTTATGCCATT
CGCAATCAGACGGTGCCAGCACCCAccatcccccgtcctccaaaaTTGAT
CGATGGAAGCACAACTCAAGCAATTGCATGGCAAGGATCTGTGGGGGCGC
AACACTACGAGttagaaaggaaggaagtaGCTCTTGGATACCAATTAGAC
ACAGGCATGACGGCATCGGGAGCAGATAGGACGAGCAcgtggcaggaggg
aaaatggatTCGGATTTCGAATAATCTCTCAGACAGCATGAATCCTTACG
TTCCATTCATGGACGCCACTGCTCAACCTGGAAAGATTTATGAGTACAGG
ATTTATGCGGTCAGTTCTGCAGGGCGCAGTGCCCCATCACCTACAATGTC
CATTCATGCATCCTCAGCTGCTTCTCGACCCTGAATGCAGTCCCTGGCTC
TAAAGCCACATAGACTGCCTCAGGTTGCTCCTACACTCCCATTCGTTAGA
AATGGATTCCAGTGTGTAAACGAGGCCACAATGGTTCAACCATGTCAAAA
TTCAACTCGGAAAAAGTATCGTTGCTTTATTCAGCTTGCGATCCTCACTA
TTCCAGCGCTTATGCTGCTCTTTCCGGAAGTAAAAGATCGATTGGGCTCG
TCGGGCTTTTTCCCATCTGTGCATCGCAATCTCAAACATGACATGCATTC
AAGCGCAGCAAAATCCTTTCACGGGGCAAAAGACGCGTTAGATCAATTTG
TTGTCAGAAAAAAGGATCGCCTATTCCTAAATGGCGAGGCTTTTCGCTTC
ATTTCGTTCAATGTCCCAAATCTGCACGTCGTGGAAGATGAGACTTGGCA
CAGGGTCTCACAGTGGGAGCAAGAAGATGCGCTGGAGACGATCTCGAGGA
TGGGTGGGCAGGTGGTACGCATATACCCTATGTCAATTGTAGGAGGCTTG
AACAACGGCACTTATACTCACATCTTGGGCAAAGGAATGTACAACGAAGC
TCTTTTCCAAGACCTGGACCGATTGTTGGTGGTGGCACATCGATTGGAAA
TCCGTGTCATTATACCTTTTATTGACCACTGGGAGTGGTGGGGAGGCGTT
TCACAATTTGCTAGGCTGTTCAATGCGTCATTTAGTGATTTTTACGAGTC
GCCACTCATCAAGGCAGGCTTCCTTGATTTTGTCGAGTATTTGCTGATGC
GAAAAAACACCTTGACGGGTCAATTATATCGGGATGACCCTACAATTCTT
GCCTGGGAAACTGGAAATGAATTGGACTATGTGAATGATGACACACCCCA
CACAAATACGCATCTCTCTGCCCCGCTGATGTTGCCCAGTCTAGCAGTCA
TGGACAAGTGGACGAGCGAACTAGCGGCGTTCCTGAAAAAAAGGGATCCC
AACCATCTAGTCATTGATGGGCGTTTACTGAACAATCGAGACGTGAGCCG
GATGCAACTATTGGATCCGCACATTGACTTGATCTCGGACCACTTTTATC
CCAATACTGACTTCTCCTTCGAAGCGCGCTTGACTCGCATGCTTTCCTTC
AGCAAGCGCCATAAACCTTTCTTGGTCGGAGAGTTCGGAATGGTATCGTC
TCAGACAATGGATGCCCTGGCCAAGCGCGTCATTGAAGAACCCGCTGTAG
CCGGGGCATTACTTTGGTCCCTTCGGTCGCACAGTGCTCAAGGTGGATTC
TATTGGCACTACGAATATGATGATTTTTGGGCGTATCACTATCTAGGCTT
CGACTCGAACCCAGGCactgaagaaaaaaaggtgATGGCCGTCGTAGAAA
AGCACGCTTATGCCATTCGCAATCAGACGGTGCCAGCACCCAccatcccc
cgtcctccaaaaTTGATCGATGGAAGCACAACTCAAGCAATTGCATGGCA
AGGATCTGTGGGGGCGCAACACTACGAGttagaaaggaaggaagtaGCTC
TTGGATACCAATTAGACACAGGCATGACGGCATCGGGAGCAGATAGGACG
AGCAcgtggcaggagggaaaatggatTCGGATTTCGAATAATCTCTCAGA
CAGCATGAATCCTTACGTTCCATTCATGGACGCCACTGCTCAACCTGGAA
AGATTTATGAGTACAGGATTTATGCGGTCAGTTCTGCAGGGCGCAGTGCC
CCATCACCTACAATGTCCATTCATGCATCCTCAGCTGCTTCTCGACCCTG
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