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Properties
Property Name | Value |
Product | cystatin b |
Orig transcript id | gnl|cribi|Naga_100060g13.5492.mrna |
Orig protein id | gnl|cribi|Naga_100060g13.5492 |
Gbkey | mRNA |
Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037249.1 | supercontig | KK037249.1:331029..332753 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8582 ID=rna8582|Name=rna8582|organism=Nannochloropsis gaditana|type=mRNA|length=1134bp CTAGTCCTCAAATTCCGCCCCCTGTGCGCCATGCTCGTGGAAATCAGGTG CCTTGGAGTATACTAGGCATAATACATGATGATGCATGCATGTCATGCCT CATTTGTATTGTTGGTGCTGAGCGTGCGGCATTGGCGGCCTTGCTTAGTA CCTCCCTCTGCTGGTTTCAATCAACAGACTGCAGCTCTTTCTGGCAGCAT TTTTTCCCCACTATCTGTGCTGCCGCTCATTGAATATCAGCTCACTCAAA TCAATTACATAATAGGCTTCTTAAATCGTTGGCGTGTCATGAGTGGCGAT GCACCCACTGCTGGATTGATCGGCGGCTTCGGATCGGCCAGTCCTGCAGC TGACCCCGAGGTGACGGCCCTCCTGACAAAGATGAAGCCCGAGGTGGAGA AGCATCTCGCTACCACTTTCAAGATGTTTGCACCTCACACTCTCCGCACT CAAGTGGTAGCGGGCACAAATTATCGGTGCAAGGTGGATGTGGGGGATGG GAATTTTGTTCATGTAGTGGTGCACCAACCTCTGCCTCACACCAAAGAGC CCGCCAAGCTCCTATCCGCGGAGGGGGGCAAGACACTTTCAGACGCCCTC TAGGTATTTCCGAGGAGGGACCACGAGCAGGACATTACGACACGTCGTCA CAGGCGCAAATTACCCAGTGAAGTTCTACACAATGGGGCAGGCAATTAGC AAAAGGTGGTGAGAGCGTGTTCGCGGGCGAGATGTGGAGTGCGCAAGCGG GCGAGATGTGGAGTGCGCAAGCTTAGAATGTGCCCGCCCACGAAATAAAA TTGAAAAATGACGAAGCATGAGAATGGATGTATATAAATGTCCTTGCGGT AAATATGATGACGCAGAATATATTTCCTGTCTTTAAGCACAACGTCGAGG GGATATGTATGGTGATGCTGTGGGATTAAAGGTCAGTGGATGATAGTATC TCGTGTCCACTGGAAGGTCAAAGGAGTAAAGAAACTTCGAAAAAATTGGA ATTGTGACGATGCCCAGGAATTTGCATTTTTTTGCATTCTCTAAAGCTGC TCTTTGGTGTTATTCATAAAAACCTTGTCGTTGACTTTTGAAGATTTGTT GGAAGACCAAGAGCCTAAGGGGCAGAATTTAAAC back to topprotein sequence of rna8582 >rna8582-protein ID=rna8582-protein|Name=rna8582|organism=Nannochloropsis gaditana|type=polypeptide|length=145bp MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLP LIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALL TKMKPEVEKHLATTFKMFAPHTLRTQVRAQIIGARWMWGMGILFM back to topmRNA from alignment at KK037249.1:331029..332753+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8582 ID=rna8582|Name=rna8582|organism=Nannochloropsis gaditana|type=mRNA|length=1725bp|location=Sequence derived from alignment at KK037249.1:331029..332753+ (Nannochloropsis gaditana) CTAGTCCTCAAATTCCGCCCCCTGTGCGCCATGCTCGTGGAAATCAGGTG
CCTTGGAGTATACTAGGCATAATACATGATGATGCATGCATGTCATGCCT
CATTTGTATTGTTGGTGCTGAGCGTGCGGCATTGGCGGCCTTGCTTAGTA
CCTCCCTCTGCTGGTTTCAATCAACAGACTGCAGCTCTTTCTGGCAGCAT
TTTTTCCCCACTATCTGTGCTGCCGCTCATTGAATATCAGCTCACTCAAA
TCAATTACATAATAGGCTTCTTAAATCGTTGGCGTGTCATGAGTGGCGAT
GCACCCACTGCTGGATTGATCGGCGGCTTCGGATCGGCCAGTCCTGCAGC
TGACCCCGAGGTGACGGCCCTCCTGACAAAGATGAAGcccgaggtggaga
aggtgagaAAGGGTATAGAATAAGGATTTGTGATGGACCATGTGACATTA
CGAGAAGGGAGTTTTCCTGGATCATCCGAAAGTTGGCCATAATTGCATAA
TCATCCGCGGGCTGCAACGAATAAAGGGGATAAAAGGACCAGCTCCTGAG
CTCGCATCGTTAACAACCGTAAGATCACCCCTCCACAGCATCTCGCTACC
ACTTTCAAGATGTTTGCACCTCACACTCTCCGCACTCAAGTGGTAAGATG
TGATGCATGGGAGCGTACGCGAGTGGGGTTATCTGGGAAGCCCAGGTCCC
TGTCGTAGTTGACAATCCAGCCTCGCCTTCGCGGATTTTCTGGATTTTCT
GTCCATACTATTCTGCCTTACATCATGTCTGTGTTACCaaatcgtcgtcc
tccccccgtcgACAGGTAGCGGGCACAAATTATCGGTGCAAGGTGGATGT
GGGGGATGGGAATTTTGTTCATGTAGTGGTGCACCAACCTCTGCCTCACA
CCAAAGAGCCCGCCAAGGTAGGATGATCGACAGGGGAACAGTATGAGGGA
CGTGCGTACTGCCTGTGAACCACTTTTAGTGTGAGAGTTGACAAGAAGAG
AGCGTTGACGAGTACAGGGCGATTACGACGCCTCATGGAAAATAATTGAG
ACAGTACGCATGGGCGCCGGGCGGCAATAAGCGCATTGTGAGGCGACTCC
TTCTCTCACATATGCGTGTGTTTTTCACTGTCTTTCCCTGGAAAATCAGC
TCCTATCcgcggaggggggcaagaCACTTTCAGACGCCCTCTAGGTATTT
CCGAGGAGGGACCACGAGCAGGACATTACGACACGTCGTCACAGGCGCAA
ATTACCCAGTGAAGTTCTACACAATGGGGCAGGCAATTAGCAAAAGGTGG
TGAGAGCGTGTTCGCGGGCGAGATGTGGAGTGCGCAAGCGGGCGAGATGT
GGAGTGCGCAAGCTTAGAATGTGCCCGCCCACGAAATAAAATTGAAAAAT
GACGAAGCATGAGAATGGATGTATATAAATGTCCTTGCGGTAAATATGAT
GACGCAGAATATATTTCCTGTCTTTAAGCACAACGTCGAGGGGATATGTA
TGGTGATGCTGTGGGATTAAAGGTCAGTGGATGATAGTATCTCGTGTCCA
CTGGAAGGTCAAAGGAGTAAAGAAACTTCGAAAAAATTGGAATTGTGACG
ATGCCCAGGAATTTGCATTTTTTTGCATTCTCTAAAGCTGCTCTTTGGTG
TTATTCATAAAAACCTTGTCGTTGACTTTTGAAGATTTGTTGGAAGACCA
AGAGCCTAAGGGGCAGAATTTAAAC back to topCoding sequence (CDS) from alignment at KK037249.1:331029..332753+ >rna8582 ID=rna8582|Name=rna8582|organism=Nannochloropsis gaditana|type=CDS|length=1314bp|location=Sequence derived from alignment at KK037249.1:331029..332753+ (Nannochloropsis gaditana) ATGATGATGCATGCATGTCATGCCTCATTTGTATTGTTGGTGCTGAGCGT GCGGCATTGGCGGCCTTGCTTAGTACCTCCCTCTGCTGGTTTCAATCAAC AGACTGCAGCTCTTTCTGGCAGCATTTTTTCCCCACTATCTGTGCTGCCG CTCATTGAATATCAGCTCACTCAAATCAATTACATAATAGGCTTCTTAAA TCGTTGGCGTGTCATGAGTGGCGATGCACCCACTGCTGGATTGATCGGCG GCTTCGGATCGGCCAGTCCTGCAGCTGACCCCGAGGTGACGGCCCTCCTG ACAAAGATGAAGcccgaggtggagaagCATCTCGCTACCACTTTCAAGAT GTTTGCACCTCACACTCTCCGCACTCAAGTGCGGGCACAAATTATCGGTG CAAGGTGGATGTGGGGGATGGGAATTTTGTTCATGTAGATGATGATGCAT GCATGTCATGCCTCATTTGTATTGTTGGTGCTGAGCGTGCGGCATTGGCG GCCTTGCTTAGTACCTCCCTCTGCTGGTTTCAATCAACAGACTGCAGCTC TTTCTGGCAGCATTTTTTCCCCACTATCTGTGCTGCCGCTCATTGAATAT CAGCTCACTCAAATCAATTACATAATAGGCTTCTTAAATCGTTGGCGTGT CATGAGTGGCGATGCACCCACTGCTGGATTGATCGGCGGCTTCGGATCGG CCAGTCCTGCAGCTGACCCCGAGGTGACGGCCCTCCTGACAAAGATGAAG cccgaggtggagaagCATCTCGCTACCACTTTCAAGATGTTTGCACCTCA CACTCTCCGCACTCAAGTGCGGGCACAAATTATCGGTGCAAGGTGGATGT GGGGGATGGGAATTTTGTTCATGTAGATGATGATGCATGCATGTCATGCC TCATTTGTATTGTTGGTGCTGAGCGTGCGGCATTGGCGGCCTTGCTTAGT ACCTCCCTCTGCTGGTTTCAATCAACAGACTGCAGCTCTTTCTGGCAGCA TTTTTTCCCCACTATCTGTGCTGCCGCTCATTGAATATCAGCTCACTCAA ATCAATTACATAATAGGCTTCTTAAATCGTTGGCGTGTCATGAGTGGCGA TGCACCCACTGCTGGATTGATCGGCGGCTTCGGATCGGCCAGTCCTGCAG CTGACCCCGAGGTGACGGCCCTCCTGACAAAGATGAAGcccgaggtggag aagCATCTCGCTACCACTTTCAAGATGTTTGCACCTCACACTCTCCGCAC TCAAGTGCGGGCACAAATTATCGGTGCAAGGTGGATGTGGGGGATGGGAA TTTTGTTCATGTAG back to top
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