rna8575, rna8575 (mRNA) Nannochloropsis gaditana

Overview
Namerna8575
Unique Namerna8575
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length774
Alignment locationKK037249.1:311439..313115 +

Link to JBrowse

Properties
Property NameValue
Productarginine methyltransferase 4
Orig transcript idgnl|cribi|Naga_100060g20.5490.mrna
Orig protein idgnl|cribi|Naga_100060g20.5490
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:311439..313115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100060g20gene8311Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8575rna8575-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22122.1cds8548Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8575 ID=rna8575|Name=rna8575|organism=Nannochloropsis gaditana|type=mRNA|length=774bp
GTTGGAGATGAAGATGGATCAGAAAACGATGAGGATGAGGGGGGAGGAGG
GCTGCTGCTGGTGAAGCGGAAGCATTCGTGGGACATGGAGGACGCGGAGG
AGGCAGAGAGCTTGTTGGAGAAAGCCAAGAGAAAGAAGGCAAAGAAGGAG
AAGATGAAAATTGCGGTCGAGAGGACACGCAGTCAAAATAAGAAGATCGT
GTTTGCAGAGGAAAGTGATGAGGAGGTAGTGGAGGAGGGAAAAGGGGCAA
AAGGAATGAAGCAGCTCGATGGAGAGCCGAAGAGTGAGAGGAGGGACCGA
CTAACCATGGAGGCTGAAAACGAGGGGTTGGTTTCGGATATGATGACCTT
AAAGGCTCAAAACGAGGCGTACGTTCAGGCGGTACAACGACGGCTTCTGG
TCAGTCGGGAAGAGGATCGGGCAAAAGAGCGCGAACGGGTTCGGGAGAAG
CACAAGAAAAGGCGACTTCGTGAGAAAGGAGAAAGGGAGGAGGAACAAGA
AGAGGCTCAATTGGGGAATGGGGTGGCTCTTGGGAGTTTTGAGGAGGAAG
AGGAATCAGGGGAGCAGGATGAGGATGAAGGAGAGGTGGATGAGGAAGAG
GAGGAGGGCGAGGAGGAGGAGGTGAACAACGACAACGTCGTAAATGAGGG
ACGCCAGGACAGATTGGTTGAGGGCATGTCTTTGCGAGAACAAGAAGAGG
CGGTGCTCCGGAGCTTGCGGGGCGGCTAGACTGCTCAGCGCGTTAAAAAA
GTGGAAAACAATACATATCCAATC
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protein sequence of rna8575

>rna8575-protein ID=rna8575-protein|Name=rna8575|organism=Nannochloropsis gaditana|type=polypeptide|length=397bp
MPPVSNGRPKGGHEAENDDTQASKNPFTRYYAQLLHQQNMMQDNIRTGTY
RNAFLTHKADFQDKVVLDVGTGTGILAFFAIQAGARKVYAVEASGMAKHA
ETLVKANGLEGRIMVVKKRVEEMELPEMVDIIVSEPIGFLLVHERMLETY
LTARDKWLKQGGLMFPNAGDIVMVPFTDELLYNEQLGKTAFWSTSKDFYG
VDLTSLQKDAQAEYFAQPVVGYFHPSCVLAPSAPVRHRVDFLCVTHADLQ
SFQVPFTFRAERTALMHGMGCWFDIEFAGSGAGGNTPVVLSTSPAAPGTH
WYQCRLLLPEPIAVNRGQTVSGSMQFTANEHFSYDLLLTVRLDGTNIQCS
TAIFLQDQSYHYLNHPVVTPVGDPQAAGIGALGGEGGNWAPAMNTTA
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mRNA from alignment at KK037249.1:311439..313115+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8575 ID=rna8575|Name=rna8575|organism=Nannochloropsis gaditana|type=mRNA|length=1677bp|location=Sequence derived from alignment at KK037249.1:311439..313115+ (Nannochloropsis gaditana)
ccatctttcctcttcctacAGCCTGTGCCATGCGTCACTAAGCATTCACT
CACGTGCATCCTCGTGCATGCATGCGCATCTCTTTTCGCGCCTATCACAG
GTCGGTCCCGTGCTTCCTTTCGCCCCGGGTGTTCCGAGATGCCGCCTGTT
TCTAACGGAAGGCCGAAGGGGGGCCACGAGGCAGAAAACGACGACACACA
AGCGTCCAAGAACCCATTCACACGCTATTGTACGTGAACGTATAAGCATT
GACGGATAATTCTGCCGTAAAGGTTGTCCCGTCTTGTTCGTACGTTAAAT
TTACGccccaacctcccttcctcaccccaCCCAGACGCCCAACTCCTTCA
TCAACAAAACATGATGCAGGACAACATTCGCACCGGCACCTACCGAAACG
CTTTCCTAACACACAAAGCTGATTTTCAAGACAAGGTTGTCCTTGACGTG
GGAACGGGCACAGGGATATTGGCATTTTTCGCCATCCAGGCAGGCGCCCG
CAAGGTGTACGCGGTGGAAGCCAGCGGGATGGCCAAGCATGCCGAAACGC
TAGTGAAGGCAAACGGattggagggaaggatcaTGGTGGTGAAGAAAAGg
gtggaagagatggaacTACCGGAAATGGTGGACATTATTGTCTCCGAGCC
GATTGGGTTCCTGTTGGTGCATGAACGAATGTTGGAGACGTACCTAACAG
CACGTGATAAATGGCTCAAACAGGGGGGGCTGATGTTTCCAAATGCCGGG
GACATCGTCATGGTCCCTTTCACAGACGAGTTGCTTTACAACGAGCAGTT
GGGAAAGACGGCTTTCTGGTCCACCTCGAAAGATTTCTACGGCGTCGACC
TGACGAGCCTGCAAAAAGACGCCCAAGCCGAATATTTCGCGCAGCCTGTG
GTCGGTTACTTTCATCCCTCGTGCGTGCTTGCGCCCTCTGCGCCGGTGCG
GCACCGGGTGGATTTCCTGTGCGTGACACACGCAGATTTGCAAAGCTTCC
AGGTGCCTTTTACGTTTCGGGCGGAACGCACTGCCCTCATGCATGGGATG
GGTTGCTGGTTCGACATCGAGTTCGCAGGGTCTGGGGCTGGCGGTAATAC
GCCCGTGGTGCTGTCGACCAGTCCCGCGGCACCTGGGACGCACTGGTATC
AATGTCGGTTGCTCTTACCGGAGCCCATCGCGGTAAACAGGGGACAGACA
GTCAGTGGCTCGATGCAATTCACGGCAAACGAGCATTTTTCTTATGATTT
GTTGCTCACAGTACGCTTGGACGGGACGAACATTCAATGTTCCACTGCAA
TTTTTTTGCAGGACCAAAGCTATCATTACTTGAATCATCCTGTGGTGACA
CCCGTGGGGGATCCACAGGCAGCGGGAATTGGGGCtttgggtggggaggg
aggaaactgGGCACCTGCCATGAACACAACTGCCTGACGTCATTCAGTTT
CAAGTTTGTATTGGTCAACGTATTTAAAAGCATGGTCATAAAGAGTCGGT
CGTCATCTCTAAAATTGAAAATGATCAAAAATGAGAAAGAAATGGTAGGA
GGCGAAATTGAGGGAAGAATACGAGACACCGGGAGGAATCGAGGCAACTC
AGTGGTGTAATTCATTGCTTTCTAAATAACGCATGGTAAATTCAGTAAAG
AAATCTAAGTCGGAGGAAATACAATAT
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Coding sequence (CDS) from alignment at KK037249.1:311439..313115+

>rna8575 ID=rna8575|Name=rna8575|organism=Nannochloropsis gaditana|type=CDS|length=2388bp|location=Sequence derived from alignment at KK037249.1:311439..313115+ (Nannochloropsis gaditana)
ATGCCGCCTGTTTCTAACGGAAGGCCGAAGGGGGGCCACGAGGCAGAAAA
CGACGACACACAAGCGTCCAAGAACCCATTCACACGCTATTACGCCCAAC
TCCTTCATCAACAAAACATGATGCAGGACAACATTCGCACCGGCACCTAC
CGAAACGCTTTCCTAACACACAAAGCTGATTTTCAAGACAAGGTTGTCCT
TGACGTGGGAACGGGCACAGGGATATTGGCATTTTTCGCCATCCAGGCAG
GCGCCCGCAAGGTGTACGCGGTGGAAGCCAGCGGGATGGCCAAGCATGCC
GAAACGCTAGTGAAGGCAAACGGattggagggaaggatcaTGGTGGTGAA
GAAAAGggtggaagagatggaacTACCGGAAATGGTGGACATTATTGTCT
CCGAGCCGATTGGGTTCCTGTTGGTGCATGAACGAATGTTGGAGACGTAC
CTAACAGCACGTGATAAATGGCTCAAACAGGGGGGGCTGATGTTTCCAAA
TGCCGGGGACATCGTCATGGTCCCTTTCACAGACGAGTTGCTTTACAACG
AGCAGTTGGGAAAGACGGCTTTCTGGTCCACCTCGAAAGATTTCTACGGC
GTCGACCTGACGAGCCTGCAAAAAGACGCCCAAGCCGAATATTTCGCGCA
GCCTGTGGTCGGTTACTTTCATCCCTCGTGCGTGCTTGCGCCCTCTGCGC
CGGTGCGGCACCGGGTGGATTTCCTGTGCGTGACACACGCAGATTTGCAA
AGCTTCCAGGTGCCTTTTACGTTTCGGGCGGAACGCACTGCCCTCATGCA
TGGGATGGGTTGCTGGTTCGACATCGAGTTCGCAGGGTCTGGGGCTGGCG
GTAATACGCCCGTGGTGCTGTCGACCAGTCCCGCGGCACCTGGGACGCAC
TGGTATCAATGTCGGTTGCTCTTACCGGAGCCCATCGCGGTAAACAGGGG
ACAGACAGTCAGTGGCTCGATGCAATTCACGGCAAACGAGCATTTTTCTT
ATGATTTGTTGCTCACAGTACGCTTGGACGGGACGAACATTCAATGTTCC
ACTGCAATTTTTTTGCAGGACCAAAGCTATCATTACTTGAATCATCCTGT
GGTGACACCCGTGGGGGATCCACAGGCAGCGGGAATTGGGGCtttgggtg
gggagggaggaaactgGGCACCTGCCATGAACACAACTGCCTGAATGCCG
CCTGTTTCTAACGGAAGGCCGAAGGGGGGCCACGAGGCAGAAAACGACGA
CACACAAGCGTCCAAGAACCCATTCACACGCTATTACGCCCAACTCCTTC
ATCAACAAAACATGATGCAGGACAACATTCGCACCGGCACCTACCGAAAC
GCTTTCCTAACACACAAAGCTGATTTTCAAGACAAGGTTGTCCTTGACGT
GGGAACGGGCACAGGGATATTGGCATTTTTCGCCATCCAGGCAGGCGCCC
GCAAGGTGTACGCGGTGGAAGCCAGCGGGATGGCCAAGCATGCCGAAACG
CTAGTGAAGGCAAACGGattggagggaaggatcaTGGTGGTGAAGAAAAG
ggtggaagagatggaacTACCGGAAATGGTGGACATTATTGTCTCCGAGC
CGATTGGGTTCCTGTTGGTGCATGAACGAATGTTGGAGACGTACCTAACA
GCACGTGATAAATGGCTCAAACAGGGGGGGCTGATGTTTCCAAATGCCGG
GGACATCGTCATGGTCCCTTTCACAGACGAGTTGCTTTACAACGAGCAGT
TGGGAAAGACGGCTTTCTGGTCCACCTCGAAAGATTTCTACGGCGTCGAC
CTGACGAGCCTGCAAAAAGACGCCCAAGCCGAATATTTCGCGCAGCCTGT
GGTCGGTTACTTTCATCCCTCGTGCGTGCTTGCGCCCTCTGCGCCGGTGC
GGCACCGGGTGGATTTCCTGTGCGTGACACACGCAGATTTGCAAAGCTTC
CAGGTGCCTTTTACGTTTCGGGCGGAACGCACTGCCCTCATGCATGGGAT
GGGTTGCTGGTTCGACATCGAGTTCGCAGGGTCTGGGGCTGGCGGTAATA
CGCCCGTGGTGCTGTCGACCAGTCCCGCGGCACCTGGGACGCACTGGTAT
CAATGTCGGTTGCTCTTACCGGAGCCCATCGCGGTAAACAGGGGACAGAC
AGTCAGTGGCTCGATGCAATTCACGGCAAACGAGCATTTTTCTTATGATT
TGTTGCTCACAGTACGCTTGGACGGGACGAACATTCAATGTTCCACTGCA
ATTTTTTTGCAGGACCAAAGCTATCATTACTTGAATCATCCTGTGGTGAC
ACCCGTGGGGGATCCACAGGCAGCGGGAATTGGGGCtttgggtggggagg
gaggaaactgGGCACCTGCCATGAACACAACTGCCTGA
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Synonyms
Publications