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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100060g21.5484.mrna |
| Orig protein id | gnl|cribi|Naga_100060g21.5484 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:310419..311192 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8574 ID=rna8574|Name=rna8574|organism=Nannochloropsis gaditana|type=mRNA|length=1713bp
AGCATTATAGAAATGGGGGCGTTGCCACTCGGCAGGATTATCAACGAGAG
GGGAAGGGTGGTGGAAGACAGCAAGGGCAAAACAGAACGGGCGCAGGAAA
AAGAGCATCGATATCTGCGGCGGCGGAAGAAAAACGGCAGGGCTTGCGCG
TGCAAGAAATGGAATTGCTTCGAAAACGGGTGGTAGCAGAAGCTCCTGCA
CCAGGCACCCAGCTTTTTGTGGAGGGTGGTGGGCCGGGAAAGGCCTTTCG
CGACCTCCCCCTCTCGAGAATAACCCTACAAGGGTTAGATCGAAACAAGT
TTTCTGCCATGACCGACATTCAACTGGCCGCAGTGCCTCATGCCTTGGCA
GGACGCGATGTCCTAGGTGCCGCCAAAACTGGTTCGGGGAAAACGCTCGC
GTTCGTGGTGCCGCTCCTCGAAAAATTATACCGGGAGGGATGGGCCCTCT
CAGACGGCTTGGGAGCCTTGATCATCACACCCACGCGGGAGCTGGCGTTG
CAAATATTTGAGGTCTTGCGGACTGTGGGGAAAGGGCACATGTTCTCGGC
GGCCCTGTTGACGGGAGGGAAAAAAGAATTCCGGGAGGAACAAGCCAGGG
TCCCGCGGATGAACATCATCGTCGCTACCCCCGGCAGGCTCTTGCAGCAT
TTGGAAGAAACGCCGGGTTTTGACGCCTCCCAACTGCAAGTTTTGGTCCT
GGACGAGGCGGACCGGATCTTGGACATGGGCTTCAGCCGGCAGTTGAACG
CGATCCTGGCCTACCTGCCTCCCGGGGCGGGGCGTCAGACCTTACTGTTC
TCGGCGACGCAGACCAAGTCTGTCAAGGACCTGGCCCGACTTTCGCTGGA
CAAGAATTCGGAGTACGTGGGCGTGCACGACACGGCCGCCCACGCCACCC
CGGACCGGCTGGTGCAGAACTACCTGGTGGCGGCGTTGGCGGACAAGATG
GACACACTCTGGGCGTTCATCAAGAGCCACATGAAGCACAAACTCGTCGT
GTTTTTCTCCTCCTGCTCCCAGGTCCGCTACGTGCACGCCTGCTTTCGGG
CCCTCCAACCGGGCGTGCCCCTCCTCGCCCTGCACGGGAAGATCAAACAG
GCGCGGCGCACGCATATTTATTTCGAATTTGTCCGGCGGCCCGCCGCGGT
GCTCTTTGCCACCGACATTGCGGCCCGGGGCCTGGATTTTCCCGCCTGTG
ACTGGGTGGTTCAGGTGGATGCCCCAGAGGACACGGCCATGTACATCCAT
CGGGTGGGCCGGACGGCACGCTACCGAAGCGGAGGCCGCTCCCTCCTCTT
CCTTTTGCCCAGCGAAGAAGGAGGCATGCTGCGCCGGTTGGAAGCCGCGC
ATGTGCCCATCTCACGGGTGACGGTGAACCCGAGCAAGACCACCAGCGTC
CGGCAAAAGACAGCGGCGGTGGTCGCCTCCAACCCGGAGTGCAAGCGCTT
AGCCCAGAAGGCCTTCGTGTCCTACCTCCGGTCCGTGGCACTCATGCCGC
TCAAGGACGTCTTCGACATCTCGGCGCTGGACGTGGAGGCCTTCGCCGAT
GCCCTGGGTTTGTCCAAGTGCCCATCCACCAAATTTCTCAAGGCGCTGAA
GGAGGGCAGGGGGGGGCGGAGGAAGGGAGGGAGGCGGTGAGGGAGAAGAA
GAACCGATGTCGGGCTTTGGAACGCCTGAAAGAGAAGATCAAGATGGAGC
GGGCGGAGAAAGC back to topprotein sequence of rna8574 >rna8574-protein ID=rna8574-protein|Name=rna8574|organism=Nannochloropsis gaditana|type=polypeptide|length=214bp
MEDAEEAESLLEKAKRKKAKKEKMKIAVERTRSQNKKIVFAEESDEEVVE
EGKGAKGMKQLDGEPKSERRDRLTMEAENEGLVSDMMTLKAQNEAYVQAV
QRRLLVSREEDRAKERERVREKHKKRRLREKGEREEEQEEAQLGNGVALG
SFEEEEESGEQDEDEGEVDEEEEEGEEEEVNNDNVVNEGRQDRLVEGMSL
REQEEAVLRSLRGG back to topmRNA from alignment at KK037249.1:310419..311192+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8574 ID=rna8574|Name=rna8574|organism=Nannochloropsis gaditana|type=mRNA|length=774bp|location=Sequence derived from alignment at KK037249.1:310419..311192+ (Nannochloropsis gaditana)
gttggagatGAAGATGGATCAGAAaacgatgaggatgaggggggaggagg
gctgctgctggtgaaGCGGAAGCATTCGtgggacatggaggacgcggagg
aggcagagagctTGTTGGAGAAAgccaagagaaagaaggcaaagaaggag
aagatgaaaaTTGCGGTCGAGAGGACACGCAGTCAAAATAAGAAGATCGT
GTTTGCAGAGGAAAGTGATGAGGAggtagtggaggagggaaaaggggcaa
AAGGAATGAAGCAGCTCGATGGAGAGCCGAAgagtgagaggagggaccgA
CTAACCATGGAGGCTGAAAACGAGGGGTTGGTTTCGGATATGATGACCTT
AAAGGCTCAAAACGAGGCGTACGTTCAGGCGGTACAACGACGGCTTCTGG
TCAGTCGGGAAGAGGATCGGGCAAAAGAGCGCGAACGGGTTCGGGAGAAG
CACAAGAAAAGGCGACTTcgtgagaaaggagaaagggaggaggaacaaga
agAGGCTCAATTGGGGAATGGGGTGGCTCTTGGGAGttttgaggaggaag
aggaatcaggggagcaggatgaggatgaaggagaggtggatgaggaagag
gaggagggcgaggaggaggaggtgaacaACGACAACGTCGTAAATGAGGG
ACGCCAGGACAGATTGGTTGAGGGCATGTCTTTGCGAGAACAAGAAGAGG
CGGTGCTCCGGAGCTTGCGGGGCGGCTAGACTGCTCAGCGCGTTAAAAAA
GTGGAAAACAATACATATCCAATC back to topCoding sequence (CDS) from alignment at KK037249.1:310419..311192+ >rna8574 ID=rna8574|Name=rna8574|organism=Nannochloropsis gaditana|type=CDS|length=645bp|location=Sequence derived from alignment at KK037249.1:310419..311192+ (Nannochloropsis gaditana)
atggaggacgcggaggaggcagagagctTGTTGGAGAAAgccaagagaaa
gaaggcaaagaaggagaagatgaaaaTTGCGGTCGAGAGGACACGCAGTC
AAAATAAGAAGATCGTGTTTGCAGAGGAAAGTGATGAGGAggtagtggag
gagggaaaaggggcaaAAGGAATGAAGCAGCTCGATGGAGAGCCGAAgag
tgagaggagggaccgACTAACCATGGAGGCTGAAAACGAGGGGTTGGTTT
CGGATATGATGACCTTAAAGGCTCAAAACGAGGCGTACGTTCAGGCGGTA
CAACGACGGCTTCTGGTCAGTCGGGAAGAGGATCGGGCAAAAGAGCGCGA
ACGGGTTCGGGAGAAGCACAAGAAAAGGCGACTTcgtgagaaaggagaaa
gggaggaggaacaagaagAGGCTCAATTGGGGAATGGGGTGGCTCTTGGG
AGttttgaggaggaagaggaatcaggggagcaggatgaggatgaaggaga
ggtggatgaggaagaggaggagggcgaggaggaggaggtgaacaACGACA
ACGTCGTAAATGAGGGACGCCAGGACAGATTGGTTGAGGGCATGTCTTTG
CGAGAACAAGAAGAGGCGGTGCTCCGGAGCTTGCGGGGCGGCTAG back to top
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