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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100064g2.4111.mrna |
| Orig protein id | gnl|cribi|Naga_100064g2.4111 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:275501..276476 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8562 ID=rna8562|Name=rna8562|organism=Nannochloropsis gaditana|type=mRNA|length=1564bp
ATATTTTCTGGGCGTTGCCCACGGAGCTTGATCTAAAAGTGTTGTACGCT
GTGCAACTCTTTTCGAATCTTGTCGCGGTCTAAGTCGACGATGAAAAAAA
CCCCGCGTGCCTCCGAAAAGGGTCCAAATTAAAATACCCTGTGAACCCGT
TTTCACTCAACAGGTTTTGGCATTTGGAATAAGACGGCCTTATTCTTGTT
GACGCTGCTTTCCTCCTGTGCTTTTTGATCCCTCGTCATGGGTTCGACAG
AGCCCACTGCAAACTGTAACGGGGCCGCTGCTCCTTTAGGGCCCGCTGTG
AAAGTCGACGTAACAGAAATCGCGAAACCTTACAGGGAGGAGGTTCGTGC
AGCCATCCACGACAGATACGGGGGTGTTGGCCCGAAGCTGGTGGCTTTCT
TGGCAAATACCGACCCTTACGCCCGACAATACGCCGAGTGGACGGGCAGG
GCCTGCGAGGCGGACGGCATACGATACGAGCTCCGCATCATCAACGAGAA
CGAGCTGGAACAGAAACTGTACGAAGCAAACGAGGACGCAAGCGTGCACG
GCATCCTCATCTACTACCCGGTTTTTGGCTTCTTCCCCTCGTTCTACGGG
GGCTCCATGGATGACTACCTACGCGACTCCGTTTCCTTCAAGAAAGACGT
GGAAGGTCTGTCCTTCACATACCGATTCAATCTCTACCGGAATATACGCT
TCATGGACGCCGCCACCTCCGCCCCTGCCCGCGGCCCTGAACTGAAATGC
CTGCTCCCATGCACCGCCCTCAGCGTGGTGAAGATCCTGGAAAGCATCGG
TGGGTACGACCTGAGCCTTCCGGTCGGTGAGAGGATGACGGGTAAGACAG
TCAGCATCATCAACCGGAGCGAGATCGTGGGCCGGCCGCTGGGCGCCCTC
TTAGCCAACGACGGCGCCGACATCTACAGCGTTGACATCGACTCCATCTA
CCACTTCCGCCGGGGGCAGCTCCTGCAAACGTCCGAGACCCCCGAAAGCG
CGGTGCGTCGGTCGGACGTGATCGTCTGCGGTGTTCCAGTCAAGGACTAC
AAGCTCCCGACGGCCTGGGTGAAGCCGGGGGCCATCGTGGTCAACGTGGC
GAGCTACAAGAATGTGGAGGAGGAGGCTCTGTTGCAGGTCCCGGGCGTCA
AATTCGTGCCCTTGGTGGGGAAAGTGACGATTGCCATGTTGGAGCGGAAT
TTGATGCGGCTGTTCGCGCAATATCACGCCGAGGCCGCGCCGGGAAAGGA
CTTTCGGTACTACTTGGAAAACCGACCACCCGCTCAGGAGGGACCAAAGT
AGGGAAGGAGGGAGGGGGAGGGGAAGGGAGGGAGGGTGGGTCTTTGCGAA
GCCCCGCACAATTTTGAAGACATGGGATCAGGCACTCTGGACACTGAGCA
TGAGGTCAGCTATTTTCGCGAGTCGCGTACCGAAACCGTTGAGGGGCATG
AGAAAAACGACGCCGGCGTTTCAAAGCAATAAAAAAGTGCAGTGGACTCA
AGGAAGAGGGTCAAGCGGTAGTGATGCAGCACGCTTTCGCGTTGCGATTT
GGATTTCTGGCTGC back to topprotein sequence of rna8562 >rna8562-protein ID=rna8562-protein|Name=rna8562|organism=Nannochloropsis gaditana|type=polypeptide|length=267bp
MERKDGDEPLPSHLQHVDMNSEGSGTSDSGDVPRGPDGSSILLVDSRHPL
DAPGRSIPLMPVLLPSSTGKDNHDNATSLSGATRPNEASHPAFPSSVPFL
TTEELRTTLENFYRAHNPKNADKIDAFLKRYQGREPQLLLDVQAKYKDGG
VHITDYMPNTVDVEACVSVLEEKNSRADTSAVCNRRESTALSSFFAPGDS
KPAVKAKGDNHSASSSVDVGVLPALLLKAFKKKDSTHSQPQPLWARQERP
LSLPPSLPPSLPTLCRA back to topmRNA from alignment at KK037249.1:275501..276476- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8562 ID=rna8562|Name=rna8562|organism=Nannochloropsis gaditana|type=mRNA|length=976bp|location=Sequence derived from alignment at KK037249.1:275501..276476- (Nannochloropsis gaditana)
ATGGAGAGGAAGGATGGAGACGAGCCTTTGCCATCGCATCTTCAGCATGT
AGACATGAATAGCGAGGGCTCGGGGACCTCTGATTCAGGGGACGTTCCGC
GTGGCCCTGATGGAAGCAGTATACTCCTTGTTGATTCAAGACATCCATTG
GATGCGCCGGGACGATCCATCCCACTGATGCCGGTCCTGTTGCCTTCCTC
TACCGGCAAGGACAATCATGATAATGCGACCTCCCTCAGCGGTGCAACAC
GTCCCAATGAGGCCTCCCACCCCGCATTCCCTTCCTCCGTACCTTTTCTC
ACCACTGAGGAGCTGCGTACGACCTTGGAAAACTTCTACCGGGCTCACAA
CCCCAAGAATGCAGACAAAATCGACGCTTTTTTGAAGCGCTACCAAGGTC
GGGAGCCCCAGCTGTTGCTTGACGTTCAAGCGAAATACAAGGACGGAGGG
GTACATATCACGGATTATATGCCGAATACTGTTGACGTAGAGGCATGTGT
GAGTGTTCTTGAGGAAAAGAATTCGAGGGCGGACACATCAGCCGTCTGCA
ACCGCAGGGAAAGCACTGCGTTGTCTTCCTTTTTTGCGCCTGGGGATTCG
AAACCCGCCGTGAAAGCGAAAGGCGACAATCACAGCGCTAGCAGCAGCGT
TGACGTCGGGGTTCTGCCTGCCTTGCTGCTCAAGGCATTCAAAAAGAAGG
ATTCGACCCATTCCCAGGTCCGCCAAGAGCCCTCGCCCTCCGATTCCCAG
ACAAACCGCCCACCGCGCCACGTTTCATCTCCCTCCTTGCCGTCCCCCCC
GGCCTCTGCTATCCCCTCCCCCCGGCGAGAAATGGCGGATGGCCCTCATG
GCTCCCCTCTGCCCTCTTCTTCGTCCGCCGACTCCCAAGCCACAGCCCCT
GTGGGCGCGGCAGGAGCGACCCCTCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTACCGACCCTATGTCGCGCCTGA back to topCoding sequence (CDS) from alignment at KK037249.1:275501..276476- >rna8562 ID=rna8562|Name=rna8562|organism=Nannochloropsis gaditana|type=CDS|length=1608bp|location=Sequence derived from alignment at KK037249.1:275501..276476- (Nannochloropsis gaditana)
CCACAGCCCCTGTGGGCGCGGCAGGAGCGACCCCTCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTACCGACCCTATGTCGCGCCTGAATGGAGAGGAAGG
ATGGAGACGAGCCTTTGCCATCGCATCTTCAGCATGTAGACATGAATAGC
GAGGGCTCGGGGACCTCTGATTCAGGGGACGTTCCGCGTGGCCCTGATGG
AAGCAGTATACTCCTTGTTGATTCAAGACATCCATTGGATGCGCCGGGAC
GATCCATCCCACTGATGCCGGTCCTGTTGCCTTCCTCTACCGGCAAGGAC
AATCATGATAATGCGACCTCCCTCAGCGGTGCAACACGTCCCAATGAGGC
CTCCCACCCCGCATTCCCTTCCTCCGTACCTTTTCTCACCACTGAGGAGC
TGCGTACGACCTTGGAAAACTTCTACCGGGCTCACAACCCCAAGAATGCA
GACAAAATCGACGCTTTTTTGAAGCGCTACCAAGGTCGGGAGCCCCAGCT
GTTGCTTGACGTTCAAGCGAAATACAAGGACGGAGGGGTACATATCACGG
ATTATATGCCGAATACTGTTGACGTAGAGGCATGTGTGAGTGTTCTTGAG
GAAAAGAATTCGAGGGCGGACACATCAGCCGTCTGCAACCGCAGGGAAAG
CACTGCGTTGTCTTCCTTTTTTGCGCCTGGGGATTCGAAACCCGCCGTGA
AAGCGAAAGGCGACAATCACAGCGCTAGCAGCAGCGTTGACGTCGGGGTT
CTGCCTGCCTTGCTGCTCAAGGCATTCAAAAAGAAGGATTCGACCCATTC
CCAGCCACAGCCCCTGTGGGCGCGGCAGGAGCGACCCCTCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTACCGACCCTATGTCGCGCCTGAATGGAGAGG
AAGGATGGAGACGAGCCTTTGCCATCGCATCTTCAGCATGTAGACATGAA
TAGCGAGGGCTCGGGGACCTCTGATTCAGGGGACGTTCCGCGTGGCCCTG
ATGGAAGCAGTATACTCCTTGTTGATTCAAGACATCCATTGGATGCGCCG
GGACGATCCATCCCACTGATGCCGGTCCTGTTGCCTTCCTCTACCGGCAA
GGACAATCATGATAATGCGACCTCCCTCAGCGGTGCAACACGTCCCAATG
AGGCCTCCCACCCCGCATTCCCTTCCTCCGTACCTTTTCTCACCACTGAG
GAGCTGCGTACGACCTTGGAAAACTTCTACCGGGCTCACAACCCCAAGAA
TGCAGACAAAATCGACGCTTTTTTGAAGCGCTACCAAGGTCGGGAGCCCC
AGCTGTTGCTTGACGTTCAAGCGAAATACAAGGACGGAGGGGTACATATC
ACGGATTATATGCCGAATACTGTTGACGTAGAGGCATGTGTGAGTGTTCT
TGAGGAAAAGAATTCGAGGGCGGACACATCAGCCGTCTGCAACCGCAGGG
AAAGCACTGCGTTGTCTTCCTTTTTTGCGCCTGGGGATTCGAAACCCGCC
GTGAAAGCGAAAGGCGACAATCACAGCGCTAGCAGCAGCGTTGACGTCGG
GGTTCTGCCTGCCTTGCTGCTCAAGGCATTCAAAAAGAAGGATTCGACCC
ATTCCCAG back to top
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